RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 CCDC61Q9Y6R9 512 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 TONSLQ96HA7 1378 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 PHLPP1O60346 1717 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 LRP6O75581 1613 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 ZMYND10O75800 440 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 ITGAEP38570 1179 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 DIP2CQ9Y2E4 1556 aa8.17□□□□□ -1.1
TRA2B-209ENST00000466832 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
TRA2B-209ENST00000466832 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
TRA2B-209ENST00000466832 FARP1Q9Y4F1 1045 aaPredicted RBP8.17□□□□□ -1.1
TRA2B-209ENST00000466832 RPRD2Q5VT52 1461 aaKnown RBP8.16□□□□□ -1.1
TRA2B-209ENST00000466832 ZNF518AQ6AHZ1 1483 aa8.16□□□□□ -1.1
TRA2B-209ENST00000466832 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
TRA2B-209ENST00000466832 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
TRA2B-209ENST00000466832 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
TRA2B-209ENST00000466832 CHADLQ6NUI6 762 aa8.15□□□□□ -1.1
TRA2B-209ENST00000466832 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
TRA2B-209ENST00000466832 PLXNC1O60486 1568 aa8.14□□□□□ -1.11
TRA2B-209ENST00000466832 SHPRHQ149N8 1683 aa8.14□□□□□ -1.11
TRA2B-209ENST00000466832 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
TRA2B-209ENST00000466832 MYO5CQ9NQX4 1742 aa8.14□□□□□ -1.11
TRA2B-209ENST00000466832 XIRP1Q702N8 1843 aaKnown RBP8.14□□□□□ -1.11
TRA2B-209ENST00000466832 PLEKHH2Q8IVE3 1493 aa8.14□□□□□ -1.11
TRA2B-209ENST00000466832 MFSD10Q14728 455 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
TRA2B-209ENST00000466832 CDC42BPBQ9Y5S2 1711 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 CCER2I3L3R5 266 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 CABP2Q9NPB3 220 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 PZPP20742 1482 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 MBD5Q9P267 1494 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 UNC13BO14795 1591 aa8.13□□□□□ -1.11
TRA2B-209ENST00000466832 PDE4AP27815 886 aa8.12□□□□□ -1.11
TRA2B-209ENST00000466832 ANKRD30BQ9BXX2 1392 aa8.12□□□□□ -1.11
TRA2B-209ENST00000466832 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
TRA2B-209ENST00000466832 COL16A1Q07092 1604 aaPredicted RBP8.12□□□□□ -1.11
TRA2B-209ENST00000466832 RSPH4AQ5TD94 716 aa8.11□□□□□ -1.11
TRA2B-209ENST00000466832 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
TRA2B-209ENST00000466832 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
TRA2B-209ENST00000466832 AFF2P51816 1311 aa8.11□□□□□ -1.11
TRA2B-209ENST00000466832 SAMD9LQ8IVG5 1584 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 MLH3Q9UHC1 1453 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 SIN3AQ96ST3 1273 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 ABCA6Q8N139 1617 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 CCDC141Q6ZP82 1450 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
TRA2B-209ENST00000466832 KIAA1107Q9UPP5 1409 aa8.1□□□□□ -1.11
TRA2B-209ENST00000466832 BCL9LQ86UU0 1499 aa8.09□□□□□ -1.11
TRA2B-209ENST00000466832 THEMISQ8N1K5 641 aaPredicted RBP8.09□□□□□ -1.11
TRA2B-209ENST00000466832 CRISPLD2Q9H0B8 497 aa8.09□□□□□ -1.11
TRA2B-209ENST00000466832 LAMC1P11047 1609 aa8.09□□□□□ -1.11
TRA2B-209ENST00000466832 PLCH2O75038 1416 aa8.09□□□□□ -1.11
TRA2B-209ENST00000466832 BLMP54132 1417 aaPredicted RBP8.09□□□□□ -1.11
TRA2B-209ENST00000466832 MPHOSPH9Q99550 1183 aa8.09□□□□□ -1.11
TRA2B-209ENST00000466832 CLTCQ00610 1675 aaKnown RBP8.08□□□□□ -1.12
TRA2B-209ENST00000466832 ABCC1P33527 1531 aa8.08□□□□□ -1.12
TRA2B-209ENST00000466832 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
TRA2B-209ENST00000466832 IQGAP3Q86VI3 1631 aa8.08□□□□□ -1.12
TRA2B-209ENST00000466832 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
TRA2B-209ENST00000466832 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-209ENST00000466832 CAMK2BQ13554 666 aa8.08□□□□□ -1.12
TRA2B-209ENST00000466832 AK7Q96M32 723 aa8.08□□□□□ -1.12
TRA2B-209ENST00000466832 CFDP1Q9UEE9 299 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-209ENST00000466832 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
TRA2B-209ENST00000466832 PRELPP51888 382 aa8.07□□□□□ -1.12
TRA2B-209ENST00000466832 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
TRA2B-209ENST00000466832 ANKRD50Q9ULJ7 1429 aa8.06□□□□□ -1.12
TRA2B-209ENST00000466832 ATP7AQ04656 1500 aa8.06□□□□□ -1.12
TRA2B-209ENST00000466832 CEP350Q5VT06 3117 aa8.06□□□□□ -1.12
TRA2B-209ENST00000466832 MAP3K13O43283 966 aa8.05□□□□□ -1.12
TRA2B-209ENST00000466832 EFCAB2Q5VUJ9 269 aa8.05□□□□□ -1.12
TRA2B-209ENST00000466832 KIF12Q96FN5 646 aa8.05□□□□□ -1.12
TRA2B-209ENST00000466832 RRP7BPQ9NSQ0 103 aa8.05□□□□□ -1.12
TRA2B-209ENST00000466832 FAM135AQ9P2D6 1515 aa8.05□□□□□ -1.12
TRA2B-209ENST00000466832 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 RALGAPBQ86X10 1494 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 EP400Q96L91 3159 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 DUOX2Q9NRD8 1548 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 ZC3H13Q5T200 1668 aaKnown RBP8.04□□□□□ -1.12
TRA2B-209ENST00000466832 ABCC3O15438 1527 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 SF3B2Q13435 895 aaKnown RBP8.04□□□□□ -1.12
TRA2B-209ENST00000466832 GPIHBP1Q8IV16 184 aa8.04□□□□□ -1.12
TRA2B-209ENST00000466832 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
TRA2B-209ENST00000466832 EIF2AK4Q9P2K8 1649 aaKnown RBP8.03□□□□□ -1.12
TRA2B-209ENST00000466832 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
TRA2B-209ENST00000466832 AHDC1Q5TGY3 1603 aaPredicted RBP8.02□□□□□ -1.12
TRA2B-209ENST00000466832 NLRP1Q9C000 1473 aa8.02□□□□□ -1.13
TRA2B-209ENST00000466832 NINLQ9Y2I6 1382 aa8.02□□□□□ -1.13
TRA2B-209ENST00000466832 ANP32CO43423 234 aa8.02□□□□□ -1.13
TRA2B-209ENST00000466832 EIF4G2P78344 907 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRA2B-209ENST00000466832 TNRQ92752 1358 aa8.02□□□□□ -1.13
TRA2B-209ENST00000466832 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-209ENST00000466832 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-209ENST00000466832 ARHGAP5Q13017 1502 aa8.01□□□□□ -1.13
TRA2B-209ENST00000466832 SYCP2Q9BX26 1530 aa8.01□□□□□ -1.13
TRA2B-209ENST00000466832 PSDA5PKW4 1024 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-209ENST00000466832 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
TRA2B-209ENST00000466832 KRI1Q8N9T8 703 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms