RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 POGKQ9P215 609 aa28.67■■■□□ 2.18
PPP1R3F-203ENST00000466508 PLEKHG1Q9ULL1 1385 aa28.66■■■□□ 2.18
PPP1R3F-203ENST00000466508 GTF3C3Q9Y5Q9 886 aa28.66■■■□□ 2.18
PPP1R3F-203ENST00000466508 METP08581 1390 aa28.65■■■□□ 2.18
PPP1R3F-203ENST00000466508 PNISRQ8TF01 805 aaKnown RBP28.63■■■□□ 2.17
PPP1R3F-203ENST00000466508 LTKP29376 864 aa28.62■■■□□ 2.17
PPP1R3F-203ENST00000466508 ADAMTS13Q76LX8 1427 aa28.62■■■□□ 2.17
PPP1R3F-203ENST00000466508 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
PPP1R3F-203ENST00000466508 TECPR2O15040 1411 aa28.61■■■□□ 2.17
PPP1R3F-203ENST00000466508 CARD14Q9BXL6 1004 aa28.61■■■□□ 2.17
PPP1R3F-203ENST00000466508 EID1Q9Y6B2 187 aa28.61■■■□□ 2.17
PPP1R3F-203ENST00000466508 MINK1Q8N4C8 1332 aaPredicted RBP28.6■■■□□ 2.17
PPP1R3F-203ENST00000466508 TXNDC2Q86VQ3 553 aa28.6■■■□□ 2.17
PPP1R3F-203ENST00000466508 THEMISQ8N1K5 641 aaPredicted RBP28.6■■■□□ 2.17
PPP1R3F-203ENST00000466508 SLC12A5Q9H2X9 1139 aa28.59■■■□□ 2.17
PPP1R3F-203ENST00000466508 CPS1P31327 1500 aa28.59■■■□□ 2.17
PPP1R3F-203ENST00000466508 NINLQ9Y2I6 1382 aa28.59■■■□□ 2.17
PPP1R3F-203ENST00000466508 BCANQ96GW7 911 aa28.59■■■□□ 2.17
PPP1R3F-203ENST00000466508 USP32Q8NFA0 1604 aa28.58■■■□□ 2.17
PPP1R3F-203ENST00000466508 CABP2Q9NPB3 220 aa28.58■■■□□ 2.17
PPP1R3F-203ENST00000466508 MED14O60244 1454 aa28.57■■■□□ 2.16
PPP1R3F-203ENST00000466508 ATAD2Q6PL18 1390 aa28.56■■■□□ 2.16
PPP1R3F-203ENST00000466508 ZNF142P52746 1687 aaPredicted RBP28.56■■■□□ 2.16
PPP1R3F-203ENST00000466508 FAM135BQ49AJ0 1406 aa28.56■■■□□ 2.16
PPP1R3F-203ENST00000466508 SRPK2P78362 688 aaKnown RBP28.55■■■□□ 2.16
PPP1R3F-203ENST00000466508 PLEKHH1Q9ULM0 1364 aa28.55■■■□□ 2.16
PPP1R3F-203ENST00000466508 NSD3Q9BZ95 1437 aa28.55■■■□□ 2.16
PPP1R3F-203ENST00000466508 ANKRD36BQ8N2N9 1353 aa28.54■■■□□ 2.16
PPP1R3F-203ENST00000466508 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
PPP1R3F-203ENST00000466508 SIRT1Q96EB6 747 aa28.53■■■□□ 2.16
PPP1R3F-203ENST00000466508 ZBED9Q6R2W3 1325 aa28.51■■■□□ 2.15
PPP1R3F-203ENST00000466508 DIP2AQ14689 1571 aa28.51■■■□□ 2.15
PPP1R3F-203ENST00000466508 PPP2R1AP30153 589 aa28.5■■■□□ 2.15
PPP1R3F-203ENST00000466508 CDK19Q9BWU1 502 aa28.49■■■□□ 2.15
PPP1R3F-203ENST00000466508 A0A1W2PP64 1363 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 CGNL1Q0VF96 1302 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 STRCQ7RTU9 1775 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 ROBO2Q9HCK4 1378 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 TBX22Q9Y458 520 aa28.44■■■□□ 2.14
PPP1R3F-203ENST00000466508 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
PPP1R3F-203ENST00000466508 CD163L1Q9NR16 1453 aa28.42■■■□□ 2.14
PPP1R3F-203ENST00000466508 PTPRUQ92729 1446 aa28.41■■■□□ 2.14
PPP1R3F-203ENST00000466508 INSRP06213 1382 aa28.41■■■□□ 2.14
PPP1R3F-203ENST00000466508 NSD2O96028 1365 aa28.41■■■□□ 2.14
PPP1R3F-203ENST00000466508 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
PPP1R3F-203ENST00000466508 TERF2IPQ9NYB0 399 aa28.4■■■□□ 2.14
PPP1R3F-203ENST00000466508 WASLO00401 505 aaPredicted RBP28.4■■■□□ 2.14
PPP1R3F-203ENST00000466508 ATP7BP35670 1465 aa28.37■■■□□ 2.13
PPP1R3F-203ENST00000466508 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.37■■■□□ 2.13
PPP1R3F-203ENST00000466508 PTCH1Q13635 1447 aa28.36■■■□□ 2.13
PPP1R3F-203ENST00000466508 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
PPP1R3F-203ENST00000466508 MORC1Q86VD1 984 aa28.34■■■□□ 2.13
PPP1R3F-203ENST00000466508 CABP1Q9NZU7 370 aa28.34■■■□□ 2.13
PPP1R3F-203ENST00000466508 ANKRD26Q9UPS8 1709 aa28.34■■■□□ 2.13
PPP1R3F-203ENST00000466508 BLMP54132 1417 aaPredicted RBP28.34■■■□□ 2.13
PPP1R3F-203ENST00000466508 HDGFL2Q7Z4V5 671 aaPredicted RBP28.33■■■□□ 2.13
PPP1R3F-203ENST00000466508 ANKLE2Q86XL3 938 aa28.32■■■□□ 2.12
PPP1R3F-203ENST00000466508 AMOTL2Q9Y2J4 779 aa28.32■■■□□ 2.12
PPP1R3F-203ENST00000466508 NCKAP5LQ9HCH0 1330 aa28.32■■■□□ 2.12
PPP1R3F-203ENST00000466508 PIK3R4Q99570 1358 aa28.32■■■□□ 2.12
PPP1R3F-203ENST00000466508 KIF20BQ96Q89 1820 aa28.3■■■□□ 2.12
PPP1R3F-203ENST00000466508 PPIP5K1Q6PFW1 1433 aa28.29■■■□□ 2.12
PPP1R3F-203ENST00000466508 WDR43Q15061 677 aaKnown RBP eCLIP28.27■■■□□ 2.12
PPP1R3F-203ENST00000466508 POLR3AO14802 1390 aaPredicted RBP28.27■■■□□ 2.12
PPP1R3F-203ENST00000466508 CDC42BPGQ6DT37 1551 aa28.27■■■□□ 2.12
PPP1R3F-203ENST00000466508 NUDT16Q96DE0 195 aaKnown RBP28.26■■■□□ 2.11
PPP1R3F-203ENST00000466508 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.11
PPP1R3F-203ENST00000466508 CHD2O14647 1828 aaKnown RBP28.25■■■□□ 2.11
PPP1R3F-203ENST00000466508 ADAMTS8Q9UP79 889 aa28.25■■■□□ 2.11
PPP1R3F-203ENST00000466508 CCDC61Q9Y6R9 512 aa28.25■■■□□ 2.11
PPP1R3F-203ENST00000466508 TOPAZ1Q8N9V7 1692 aa28.25■■■□□ 2.11
PPP1R3F-203ENST00000466508 AKAP12Q02952 1782 aa28.24■■■□□ 2.11
PPP1R3F-203ENST00000466508 ITSN1Q15811 1721 aa28.24■■■□□ 2.11
PPP1R3F-203ENST00000466508 MON2Q7Z3U7 1717 aa28.24■■■□□ 2.11
PPP1R3F-203ENST00000466508 TNNT2P45379 298 aaPredicted RBP28.22■■■□□ 2.11
PPP1R3F-203ENST00000466508 FYB1O15117 783 aa28.21■■■□□ 2.11
PPP1R3F-203ENST00000466508 PRR36Q9H6K5 1346 aa28.21■■■□□ 2.11
PPP1R3F-203ENST00000466508 EDC4Q6P2E9 1401 aaKnown RBP28.2■■■□□ 2.1
PPP1R3F-203ENST00000466508 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
PPP1R3F-203ENST00000466508 SMG6Q86US8 1419 aaKnown RBP28.19■■■□□ 2.1
PPP1R3F-203ENST00000466508 SENP3-EIF4A1A0A087X0R7 540 aa28.19■■■□□ 2.1
PPP1R3F-203ENST00000466508 GGNBP2Q9H3C7 697 aa28.19■■■□□ 2.1
PPP1R3F-203ENST00000466508 KCNA6P17658 529 aa28.17■■■□□ 2.1
PPP1R3F-203ENST00000466508 NPHP4O75161 1426 aaPredicted RBP28.16■■■□□ 2.1
PPP1R3F-203ENST00000466508 MTHFSP49914 203 aa28.15■■■□□ 2.1
PPP1R3F-203ENST00000466508 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
PPP1R3F-203ENST00000466508 SUPT16HQ9Y5B9 1047 aaKnown RBP28.12■■■□□ 2.09
PPP1R3F-203ENST00000466508 NEFLP07196 543 aa28.12■■■□□ 2.09
PPP1R3F-203ENST00000466508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
PPP1R3F-203ENST00000466508 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
PPP1R3F-203ENST00000466508 CFAP53Q96M91 514 aa28.11■■■□□ 2.09
PPP1R3F-203ENST00000466508 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
PPP1R3F-203ENST00000466508 NRKQ7Z2Y5 1582 aa28.1■■■□□ 2.09
PPP1R3F-203ENST00000466508 PLEKHG3A1L390 1219 aa28.09■■■□□ 2.09
PPP1R3F-203ENST00000466508 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
PPP1R3F-203ENST00000466508 NKTRP30414 1462 aaKnown RBP28.09■■■□□ 2.09
PPP1R3F-203ENST00000466508 PDE3BQ13370 1112 aa28.09■■■□□ 2.09
PPP1R3F-203ENST00000466508 SALL2Q9Y467 1007 aaPredicted RBP28.08■■■□□ 2.09
PPP1R3F-203ENST00000466508 FMN2Q9NZ56 1722 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms