RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CDC42BPGQ6DT37 1551 aa28.22■■■□□ 2.11
SRSF4-202ENST00000466448 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
SRSF4-202ENST00000466448 RGL3Q3MIN7 710 aa28.2■■■□□ 2.1
SRSF4-202ENST00000466448 ESCO1Q5FWF5 840 aa28.19■■■□□ 2.1
SRSF4-202ENST00000466448 TECPR2O15040 1411 aa28.18■■■□□ 2.1
SRSF4-202ENST00000466448 MPHOSPH9Q99550 1183 aa28.17■■■□□ 2.1
SRSF4-202ENST00000466448 STK26Q9P289 416 aa28.17■■■□□ 2.1
SRSF4-202ENST00000466448 NPHP3Q7Z494 1330 aa28.17■■■□□ 2.1
SRSF4-202ENST00000466448 ANKRD30BQ9BXX2 1392 aa28.16■■■□□ 2.1
SRSF4-202ENST00000466448 USP21Q9UK80 565 aa28.16■■■□□ 2.1
SRSF4-202ENST00000466448 COL22A1Q8NFW1 1626 aaPredicted RBP28.16■■■□□ 2.1
SRSF4-202ENST00000466448 LRPPRCP42704 1394 aaKnown RBP28.15■■■□□ 2.1
SRSF4-202ENST00000466448 WAPLQ7Z5K2 1190 aa28.15■■■□□ 2.1
SRSF4-202ENST00000466448 PXDNQ92626 1479 aa28.15■■■□□ 2.1
SRSF4-202ENST00000466448 MYOM2P54296 1465 aa28.14■■■□□ 2.09
SRSF4-202ENST00000466448 FNBP4Q8N3X1 1017 aaPredicted RBP28.13■■■□□ 2.09
SRSF4-202ENST00000466448 PIK3C2GO75747 1445 aa28.12■■■□□ 2.09
SRSF4-202ENST00000466448 FOXO3O43524 673 aa28.12■■■□□ 2.09
SRSF4-202ENST00000466448 XPCQ01831 940 aaPredicted RBP28.12■■■□□ 2.09
SRSF4-202ENST00000466448 TMEM132EQ6IEE7 984 aa28.12■■■□□ 2.09
SRSF4-202ENST00000466448 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
SRSF4-202ENST00000466448 ABCC11Q96J66 1382 aa28.11■■■□□ 2.09
SRSF4-202ENST00000466448 PLEKHH1Q9ULM0 1364 aa28.11■■■□□ 2.09
SRSF4-202ENST00000466448 TRPC5Q9UL62 973 aaPredicted RBP28.11■■■□□ 2.09
SRSF4-202ENST00000466448 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
SRSF4-202ENST00000466448 ATRNO75882 1429 aa28.08■■■□□ 2.09
SRSF4-202ENST00000466448 YTHDC2Q9H6S0 1430 aaKnown RBP28.06■■■□□ 2.08
SRSF4-202ENST00000466448 KNDC1Q76NI1 1749 aa28.06■■■□□ 2.08
SRSF4-202ENST00000466448 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
SRSF4-202ENST00000466448 BCL9LQ86UU0 1499 aa28.03■■■□□ 2.08
SRSF4-202ENST00000466448 FMN2Q9NZ56 1722 aa28.01■■■□□ 2.07
SRSF4-202ENST00000466448 C14orf93Q9H972 538 aaKnown RBP27.99■■■□□ 2.07
SRSF4-202ENST00000466448 NRXN1Q9ULB1 1477 aa27.98■■■□□ 2.07
SRSF4-202ENST00000466448 SIRT1Q96EB6 747 aa27.98■■■□□ 2.07
SRSF4-202ENST00000466448 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
SRSF4-202ENST00000466448 KIF1AQ12756 1690 aa27.96■■■□□ 2.07
SRSF4-202ENST00000466448 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
SRSF4-202ENST00000466448 CFAP70Q5T0N1 1121 aa27.95■■■□□ 2.06
SRSF4-202ENST00000466448 ACIN1Q9UKV3 1341 aaKnown RBP27.93■■■□□ 2.06
SRSF4-202ENST00000466448 KRT28Q7Z3Y7 464 aa27.93■■■□□ 2.06
SRSF4-202ENST00000466448 GJD4Q96KN9 370 aaPredicted RBP27.93■■■□□ 2.06
SRSF4-202ENST00000466448 DHX57Q6P158 1386 aaKnown RBP27.92■■■□□ 2.06
SRSF4-202ENST00000466448 PHF8Q9UPP1 1060 aa27.9■■■□□ 2.06
SRSF4-202ENST00000466448 SLIT2O94813 1529 aa27.9■■■□□ 2.06
SRSF4-202ENST00000466448 UNC5CLQ8IV45 518 aa27.89■■■□□ 2.06
SRSF4-202ENST00000466448 PRAM1Q96QH2 718 aa27.89■■■□□ 2.06
SRSF4-202ENST00000466448 EP400Q96L91 3159 aa27.89■■■□□ 2.05
SRSF4-202ENST00000466448 SAFB2Q14151 953 aaKnown RBP eCLIP27.88■■■□□ 2.054e-8■□□□□ 11.1
SRSF4-202ENST00000466448 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
SRSF4-202ENST00000466448 USP32Q8NFA0 1604 aa27.87■■■□□ 2.05
SRSF4-202ENST00000466448 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.87■■■□□ 2.05
SRSF4-202ENST00000466448 RALGAPBQ86X10 1494 aa27.86■■■□□ 2.05
SRSF4-202ENST00000466448 PSME1Q06323 249 aa27.85■■■□□ 2.05
SRSF4-202ENST00000466448 SRCAPQ6ZRS2 3230 aa27.85■■■□□ 2.05
SRSF4-202ENST00000466448 GLI3P10071 1580 aa27.85■■■□□ 2.05
SRSF4-202ENST00000466448 RAB3GAP2Q9H2M9 1393 aa27.85■■■□□ 2.05
SRSF4-202ENST00000466448 DLC1Q96QB1 1528 aa27.83■■■□□ 2.05
SRSF4-202ENST00000466448 CABLES1Q8TDN4 633 aa27.83■■■□□ 2.05
SRSF4-202ENST00000466448 HAP1P54257 671 aaPredicted RBP27.82■■■□□ 2.04
SRSF4-202ENST00000466448 CCDC125Q86Z20 511 aa27.82■■■□□ 2.04
SRSF4-202ENST00000466448 SBNO1A3KN83 1393 aa27.82■■■□□ 2.04
SRSF4-202ENST00000466448 RGPD8O14715 1765 aaPredicted RBP27.81■■■□□ 2.04
SRSF4-202ENST00000466448 POGKQ9P215 609 aa27.81■■■□□ 2.04
SRSF4-202ENST00000466448 ADGRB1O14514 1584 aa27.81■■■□□ 2.04
SRSF4-202ENST00000466448 PLEKHG5O94827 1062 aa27.8■■■□□ 2.04
SRSF4-202ENST00000466448 ANKARQ7Z5J8 1434 aa27.79■■■□□ 2.04
SRSF4-202ENST00000466448 ARHGEF10O15013 1369 aa27.78■■■□□ 2.04
SRSF4-202ENST00000466448 LMOD2Q6P5Q4 547 aa27.78■■■□□ 2.04
SRSF4-202ENST00000466448 ADGRB2O60241 1585 aa27.77■■■□□ 2.04
SRSF4-202ENST00000466448 PMFBP1Q8TBY8 1022 aa27.77■■■□□ 2.04
SRSF4-202ENST00000466448 ZRANB1Q9UGI0 708 aa27.77■■■□□ 2.04
SRSF4-202ENST00000466448 VPS72Q15906 364 aa27.75■■■□□ 2.03
SRSF4-202ENST00000466448 TRAK1Q9UPV9 953 aa27.75■■■□□ 2.03
SRSF4-202ENST00000466448 HIRIP3Q9BW71 556 aaPredicted RBP27.74■■■□□ 2.03
SRSF4-202ENST00000466448 ABCA3Q99758 1704 aa27.73■■■□□ 2.03
SRSF4-202ENST00000466448 PLCH1Q4KWH8 1693 aa27.72■■■□□ 2.03
SRSF4-202ENST00000466448 SEPT12Q8IYM1 358 aa27.72■■■□□ 2.03
SRSF4-202ENST00000466448 BLMP54132 1417 aaPredicted RBP27.72■■■□□ 2.03
SRSF4-202ENST00000466448 MINK1Q8N4C8 1332 aaPredicted RBP27.7■■■□□ 2.03
SRSF4-202ENST00000466448 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.02
SRSF4-202ENST00000466448 KDM2AQ9Y2K7 1162 aa27.7■■■□□ 2.02
SRSF4-202ENST00000466448 PRR36Q9H6K5 1346 aa27.69■■■□□ 2.02
SRSF4-202ENST00000466448 FAM83GA6ND36 823 aa27.69■■■□□ 2.02
SRSF4-202ENST00000466448 CCDC9Q9Y3X0 531 aaKnown RBP27.69■■■□□ 2.02
SRSF4-202ENST00000466448 NWD2Q9ULI1 1742 aa27.69■■■□□ 2.02
SRSF4-202ENST00000466448 ONECUT3O60422 494 aaPredicted RBP27.68■■■□□ 2.02
SRSF4-202ENST00000466448 EIF3AQ14152 1382 aaKnown RBP27.67■■■□□ 2.02
SRSF4-202ENST00000466448 TRPM3Q9HCF6 1732 aaPredicted RBP27.67■■■□□ 2.02
SRSF4-202ENST00000466448 TULP4Q9NRJ4 1543 aa27.67■■■□□ 2.02
SRSF4-202ENST00000466448 GPRASP1Q5JY77 1395 aa27.66■■■□□ 2.02
SRSF4-202ENST00000466448 BRWD3Q6RI45 1802 aa27.65■■■□□ 2.02
SRSF4-202ENST00000466448 WASLO00401 505 aaPredicted RBP27.65■■■□□ 2.02
SRSF4-202ENST00000466448 KRT27Q7Z3Y8 459 aa27.62■■■□□ 2.01
SRSF4-202ENST00000466448 DEFB132Q7Z7B7 95 aa27.62■■■□□ 2.01
SRSF4-202ENST00000466448 ALS2Q96Q42 1657 aa27.62■■■□□ 2.01
SRSF4-202ENST00000466448 STAC3Q96MF2 364 aa27.61■■■□□ 2.01
SRSF4-202ENST00000466448 BTG4Q9NY30 223 aa27.61■■■□□ 2.01
SRSF4-202ENST00000466448 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
SRSF4-202ENST00000466448 SF3B2Q13435 895 aaKnown RBP27.59■■■□□ 2.01
SRSF4-202ENST00000466448 NGDNQ8NEJ9 315 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms