RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
LIMK2-207ENST00000465937 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
LIMK2-207ENST00000465937 NHSL1Q5SYE7 1610 aa19.29■□□□□ 0.68
LIMK2-207ENST00000465937 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
LIMK2-207ENST00000465937 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.67
LIMK2-207ENST00000465937 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
LIMK2-207ENST00000465937 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
LIMK2-207ENST00000465937 FMN2Q9NZ56 1722 aa19.25■□□□□ 0.67
LIMK2-207ENST00000465937 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
LIMK2-207ENST00000465937 JCADQ9P266 1359 aa19.24■□□□□ 0.67
LIMK2-207ENST00000465937 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
LIMK2-207ENST00000465937 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
LIMK2-207ENST00000465937 ARHGEF28Q8N1W1 1705 aaKnown RBP19.23■□□□□ 0.67
LIMK2-207ENST00000465937 DISP3Q9P2K9 1392 aa19.22■□□□□ 0.67
LIMK2-207ENST00000465937 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
LIMK2-207ENST00000465937 POGKQ9P215 609 aa19.2■□□□□ 0.66
LIMK2-207ENST00000465937 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
LIMK2-207ENST00000465937 TRPM1Q7Z4N2 1603 aa19.19■□□□□ 0.66
LIMK2-207ENST00000465937 DDX17Q92841 729 aaKnown RBP19.19■□□□□ 0.66
LIMK2-207ENST00000465937 SAFB2Q14151 953 aaKnown RBP eCLIP19.18■□□□□ 0.66
LIMK2-207ENST00000465937 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
LIMK2-207ENST00000465937 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
LIMK2-207ENST00000465937 LRRC59Q96AG4 307 aaKnown RBP19.17■□□□□ 0.66
LIMK2-207ENST00000465937 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
LIMK2-207ENST00000465937 USP32Q8NFA0 1604 aa19.16■□□□□ 0.66
LIMK2-207ENST00000465937 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
LIMK2-207ENST00000465937 SPATA31A6Q5VVP1 1343 aa19.16■□□□□ 0.66
LIMK2-207ENST00000465937 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
LIMK2-207ENST00000465937 RGPD8O14715 1765 aaPredicted RBP19.15■□□□□ 0.66
LIMK2-207ENST00000465937 PXDNQ92626 1479 aa19.15■□□□□ 0.66
LIMK2-207ENST00000465937 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
LIMK2-207ENST00000465937 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
LIMK2-207ENST00000465937 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
LIMK2-207ENST00000465937 MINK1Q8N4C8 1332 aaPredicted RBP19.13■□□□□ 0.65
LIMK2-207ENST00000465937 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
LIMK2-207ENST00000465937 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
LIMK2-207ENST00000465937 KIF1AQ12756 1690 aa19.13■□□□□ 0.65
LIMK2-207ENST00000465937 LRP6O75581 1613 aa19.12■□□□□ 0.65
LIMK2-207ENST00000465937 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
LIMK2-207ENST00000465937 FOXO3O43524 673 aa19.12■□□□□ 0.65
LIMK2-207ENST00000465937 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
LIMK2-207ENST00000465937 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
LIMK2-207ENST00000465937 TULP4Q9NRJ4 1543 aa19.11■□□□□ 0.65
LIMK2-207ENST00000465937 EIF3AQ14152 1382 aaKnown RBP19.11■□□□□ 0.65
LIMK2-207ENST00000465937 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
LIMK2-207ENST00000465937 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
LIMK2-207ENST00000465937 PHF8Q9UPP1 1060 aa19.1■□□□□ 0.65
LIMK2-207ENST00000465937 ROCK2O75116 1388 aaKnown RBP19.08■□□□□ 0.65
LIMK2-207ENST00000465937 CENPJQ9HC77 1338 aaPredicted RBP19.08■□□□□ 0.65
LIMK2-207ENST00000465937 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
LIMK2-207ENST00000465937 COL22A1Q8NFW1 1626 aaPredicted RBP19.07■□□□□ 0.64
LIMK2-207ENST00000465937 ATP7BP35670 1465 aa19.07■□□□□ 0.64
LIMK2-207ENST00000465937 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
LIMK2-207ENST00000465937 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
LIMK2-207ENST00000465937 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
LIMK2-207ENST00000465937 KRT28Q7Z3Y7 464 aa19.04■□□□□ 0.64
LIMK2-207ENST00000465937 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
LIMK2-207ENST00000465937 SBNO1A3KN83 1393 aa19.04■□□□□ 0.64
LIMK2-207ENST00000465937 XPCQ01831 940 aaPredicted RBP19.03■□□□□ 0.64
LIMK2-207ENST00000465937 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
LIMK2-207ENST00000465937 QRICH2Q9H0J4 1663 aa19.03■□□□□ 0.64
LIMK2-207ENST00000465937 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
LIMK2-207ENST00000465937 PMFBP1Q8TBY8 1022 aa19.01■□□□□ 0.63
LIMK2-207ENST00000465937 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
LIMK2-207ENST00000465937 SBNO2Q9Y2G9 1366 aa19.01■□□□□ 0.63
LIMK2-207ENST00000465937 ITSN1Q15811 1721 aa19■□□□□ 0.63
LIMK2-207ENST00000465937 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
LIMK2-207ENST00000465937 PLEKHG3A1L390 1219 aa19■□□□□ 0.63
LIMK2-207ENST00000465937 PSME1Q06323 249 aa19■□□□□ 0.63
LIMK2-207ENST00000465937 POLR3AO14802 1390 aaPredicted RBP18.99■□□□□ 0.63
LIMK2-207ENST00000465937 TNS3Q68CZ2 1445 aa18.99■□□□□ 0.63
LIMK2-207ENST00000465937 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
LIMK2-207ENST00000465937 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
LIMK2-207ENST00000465937 POTEAQ6S8J7 498 aa18.98■□□□□ 0.63
LIMK2-207ENST00000465937 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
LIMK2-207ENST00000465937 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
LIMK2-207ENST00000465937 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
LIMK2-207ENST00000465937 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
LIMK2-207ENST00000465937 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
LIMK2-207ENST00000465937 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
LIMK2-207ENST00000465937 ARHGEF10O15013 1369 aa18.93■□□□□ 0.62
LIMK2-207ENST00000465937 NGDNQ8NEJ9 315 aaKnown RBP18.93■□□□□ 0.62
LIMK2-207ENST00000465937 ACEP12821 1306 aa18.93■□□□□ 0.62
LIMK2-207ENST00000465937 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
LIMK2-207ENST00000465937 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
LIMK2-207ENST00000465937 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
LIMK2-207ENST00000465937 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
LIMK2-207ENST00000465937 AFF2P51816 1311 aa18.91■□□□□ 0.62
LIMK2-207ENST00000465937 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
LIMK2-207ENST00000465937 SOCS7O14512 581 aa18.9■□□□□ 0.62
LIMK2-207ENST00000465937 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
LIMK2-207ENST00000465937 TESK2Q96S53 571 aa18.9■□□□□ 0.62
LIMK2-207ENST00000465937 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
LIMK2-207ENST00000465937 C8orf37Q96NL8 207 aa18.89■□□□□ 0.61
LIMK2-207ENST00000465937 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
LIMK2-207ENST00000465937 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
LIMK2-207ENST00000465937 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
LIMK2-207ENST00000465937 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
LIMK2-207ENST00000465937 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
LIMK2-207ENST00000465937 CRYBG1Q9Y4K1 1723 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms