RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
SSB-207ENST00000465871 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
SSB-207ENST00000465871 Q6ZNB5 142 aa13.64□□□□□ -0.23
SSB-207ENST00000465871 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
SSB-207ENST00000465871 PDE4DQ08499 809 aa13.63□□□□□ -0.23
SSB-207ENST00000465871 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
SSB-207ENST00000465871 FDX1P10109 184 aa13.62□□□□□ -0.23
SSB-207ENST00000465871 MMP16P51512 607 aa13.62□□□□□ -0.23
SSB-207ENST00000465871 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
SSB-207ENST00000465871 MS4A1P11836 297 aa13.61□□□□□ -0.23
SSB-207ENST00000465871 DXOO77932 396 aaKnown RBP13.6□□□□□ -0.23
SSB-207ENST00000465871 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
SSB-207ENST00000465871 RPIAP49247 311 aa13.59□□□□□ -0.23
SSB-207ENST00000465871 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
SSB-207ENST00000465871 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.24
SSB-207ENST00000465871 MOXD2PA6NHM9 499 aa13.57□□□□□ -0.24
SSB-207ENST00000465871 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
SSB-207ENST00000465871 RETREG3Q86VR2 466 aa13.57□□□□□ -0.24
SSB-207ENST00000465871 NDUFV2P19404 249 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 PRR20EP86478 221 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 PRR20CP86479 221 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 PRR20DP86480 221 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 PRR20BP86481 221 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 PRR20AP86496 221 aa13.56□□□□□ -0.24
SSB-207ENST00000465871 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
SSB-207ENST00000465871 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
SSB-207ENST00000465871 JUNDP17535 347 aa13.54□□□□□ -0.24
SSB-207ENST00000465871 ZBTB24O43167 697 aaPredicted RBP13.53□□□□□ -0.24
SSB-207ENST00000465871 GDF9O60383 454 aa13.53□□□□□ -0.24
SSB-207ENST00000465871 CD2BP2O95400 341 aaKnown RBP13.52□□□□□ -0.25
SSB-207ENST00000465871 GJA5P36382 358 aa13.52□□□□□ -0.25
SSB-207ENST00000465871 TNFRSF10AO00220 468 aa13.5□□□□□ -0.25
SSB-207ENST00000465871 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
SSB-207ENST00000465871 LCE2BO14633 110 aa13.49□□□□□ -0.25
SSB-207ENST00000465871 TRIM32Q13049 653 aa13.48□□□□□ -0.25
SSB-207ENST00000465871 MTMR2Q13614 643 aa13.48□□□□□ -0.25
SSB-207ENST00000465871 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
SSB-207ENST00000465871 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
SSB-207ENST00000465871 TRAF7Q6Q0C0 670 aa13.47□□□□□ -0.25
SSB-207ENST00000465871 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
SSB-207ENST00000465871 SPTLC1O15269 473 aa13.46□□□□□ -0.25
SSB-207ENST00000465871 FOXC1Q12948 553 aa13.46□□□□□ -0.25
SSB-207ENST00000465871 NUDT12Q9BQG2 462 aa13.45□□□□□ -0.26
SSB-207ENST00000465871 RIC3Q7Z5B4 369 aa13.43□□□□□ -0.26
SSB-207ENST00000465871 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
SSB-207ENST00000465871 PKDCCQ504Y2 493 aa13.42□□□□□ -0.26
SSB-207ENST00000465871 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
SSB-207ENST00000465871 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
SSB-207ENST00000465871 DESI1Q6ICB0 168 aa13.41□□□□□ -0.26
SSB-207ENST00000465871 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
SSB-207ENST00000465871 DGAT1O75907 488 aa13.4□□□□□ -0.26
SSB-207ENST00000465871 CCNYL3P0C7X3 344 aa13.4□□□□□ -0.26
SSB-207ENST00000465871 PTPRNQ16849 979 aa13.4□□□□□ -0.26
SSB-207ENST00000465871 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
SSB-207ENST00000465871 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
SSB-207ENST00000465871 WNT7AO00755 349 aa13.38□□□□□ -0.27
SSB-207ENST00000465871 HRCP23327 699 aa13.38□□□□□ -0.27
SSB-207ENST00000465871 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
SSB-207ENST00000465871 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
SSB-207ENST00000465871 TOR4AQ9NXH8 423 aa13.37□□□□□ -0.27
SSB-207ENST00000465871 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
SSB-207ENST00000465871 CFAP99D6REC4 459 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 WNT7BP56706 349 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 PTCRAQ6ISU1 281 aaPredicted RBP13.35□□□□□ -0.27
SSB-207ENST00000465871 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
SSB-207ENST00000465871 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
SSB-207ENST00000465871 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
SSB-207ENST00000465871 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
SSB-207ENST00000465871 MYT1Q01538 1121 aa13.33□□□□□ -0.28
SSB-207ENST00000465871 SKOR1P84550 965 aa13.32□□□□□ -0.28
SSB-207ENST00000465871 MRGPRX2Q96LB1 330 aa13.32□□□□□ -0.28
SSB-207ENST00000465871 QPCTQ16769 361 aa13.31□□□□□ -0.28
SSB-207ENST00000465871 LILRB3O75022 631 aa13.3□□□□□ -0.28
SSB-207ENST00000465871 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
SSB-207ENST00000465871 LYPD8Q6UX82 237 aa13.3□□□□□ -0.28
SSB-207ENST00000465871 UNC93B1Q9H1C4 597 aa13.3□□□□□ -0.28
SSB-207ENST00000465871 TTC24A2A3L6 582 aaPredicted RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
SSB-207ENST00000465871 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
SSB-207ENST00000465871 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
SSB-207ENST00000465871 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
SSB-207ENST00000465871 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
SSB-207ENST00000465871 AVPP01185 164 aa13.25□□□□□ -0.29
SSB-207ENST00000465871 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
SSB-207ENST00000465871 CTHP32929 405 aa13.24□□□□□ -0.29
SSB-207ENST00000465871 SH3BP2P78314 561 aa13.24□□□□□ -0.29
SSB-207ENST00000465871 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
SSB-207ENST00000465871 TSC1Q92574 1164 aa13.24□□□□□ -0.29
SSB-207ENST00000465871 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
SSB-207ENST00000465871 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
SSB-207ENST00000465871 SMPD1P17405 629 aa13.22□□□□□ -0.29
SSB-207ENST00000465871 SKIV2LQ15477 1246 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms