RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 HRCP23327 699 aa9.52□□□□□ -0.89
SSBP1-205ENST00000465582 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
SSBP1-205ENST00000465582 IFT172Q9UG01 1749 aa9.52□□□□□ -0.89
SSBP1-205ENST00000465582 SCAF11Q99590 1463 aaKnown RBP9.52□□□□□ -0.89
SSBP1-205ENST00000465582 ZFYVE9O95405 1425 aa9.51□□□□□ -0.89
SSBP1-205ENST00000465582 PPLO60437 1756 aa9.51□□□□□ -0.89
SSBP1-205ENST00000465582 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
SSBP1-205ENST00000465582 SLC52A1Q9NWF4 448 aa9.51□□□□□ -0.89
SSBP1-205ENST00000465582 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
SSBP1-205ENST00000465582 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
SSBP1-205ENST00000465582 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
SSBP1-205ENST00000465582 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
SSBP1-205ENST00000465582 RIMS2Q9UQ26 1411 aa9.5□□□□□ -0.89
SSBP1-205ENST00000465582 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
SSBP1-205ENST00000465582 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
SSBP1-205ENST00000465582 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-205ENST00000465582 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
SSBP1-205ENST00000465582 MED14O60244 1454 aa9.48□□□□□ -0.89
SSBP1-205ENST00000465582 THEMISQ8N1K5 641 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-205ENST00000465582 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
SSBP1-205ENST00000465582 LTKP29376 864 aa9.47□□□□□ -0.89
SSBP1-205ENST00000465582 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
SSBP1-205ENST00000465582 IQSEC2Q5JU85 1478 aa9.47□□□□□ -0.89
SSBP1-205ENST00000465582 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-205ENST00000465582 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-205ENST00000465582 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
SSBP1-205ENST00000465582 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
SSBP1-205ENST00000465582 TULP1O00294 542 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-205ENST00000465582 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
SSBP1-205ENST00000465582 ANKLE2Q86XL3 938 aa9.45□□□□□ -0.9
SSBP1-205ENST00000465582 DIP2AQ14689 1571 aa9.45□□□□□ -0.9
SSBP1-205ENST00000465582 SETBP1Q9Y6X0 1596 aa9.45□□□□□ -0.9
SSBP1-205ENST00000465582 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-205ENST00000465582 TXNDC2Q86VQ3 553 aa9.44□□□□□ -0.9
SSBP1-205ENST00000465582 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
SSBP1-205ENST00000465582 NWD1Q149M9 1564 aa9.43□□□□□ -0.9
SSBP1-205ENST00000465582 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
SSBP1-205ENST00000465582 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
SSBP1-205ENST00000465582 MYOM2P54296 1465 aa9.42□□□□□ -0.9
SSBP1-205ENST00000465582 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
SSBP1-205ENST00000465582 LTBP4Q8N2S1 1624 aa9.42□□□□□ -0.9
SSBP1-205ENST00000465582 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
SSBP1-205ENST00000465582 ZNF335Q9H4Z2 1342 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-205ENST00000465582 RGL3Q3MIN7 710 aa9.41□□□□□ -0.9
SSBP1-205ENST00000465582 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.9
SSBP1-205ENST00000465582 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.4□□□□□ -0.9
SSBP1-205ENST00000465582 LAMC1P11047 1609 aa9.4□□□□□ -0.9
SSBP1-205ENST00000465582 ALKQ9UM73 1620 aa9.4□□□□□ -0.9
SSBP1-205ENST00000465582 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.91
SSBP1-205ENST00000465582 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.91
SSBP1-205ENST00000465582 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 PSEN1P49768 467 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 CHADLQ6NUI6 762 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 SIN3AQ96ST3 1273 aa9.39□□□□□ -0.91
SSBP1-205ENST00000465582 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
SSBP1-205ENST00000465582 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
SSBP1-205ENST00000465582 SLC26A8Q96RN1 970 aa9.38□□□□□ -0.91
SSBP1-205ENST00000465582 CPS1P31327 1500 aa9.37□□□□□ -0.91
SSBP1-205ENST00000465582 PTPRUQ92729 1446 aa9.37□□□□□ -0.91
SSBP1-205ENST00000465582 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
SSBP1-205ENST00000465582 SOX12O15370 315 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
SSBP1-205ENST00000465582 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
SSBP1-205ENST00000465582 NLRP6P59044 892 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 METP08581 1390 aa9.36□□□□□ -0.91
SSBP1-205ENST00000465582 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
SSBP1-205ENST00000465582 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
SSBP1-205ENST00000465582 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
SSBP1-205ENST00000465582 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
SSBP1-205ENST00000465582 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
SSBP1-205ENST00000465582 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
SSBP1-205ENST00000465582 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.92
SSBP1-205ENST00000465582 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.92
SSBP1-205ENST00000465582 TONSLQ96HA7 1378 aa9.33□□□□□ -0.92
SSBP1-205ENST00000465582 ARHGEF28Q8N1W1 1705 aaKnown RBP9.32□□□□□ -0.92
SSBP1-205ENST00000465582 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
SSBP1-205ENST00000465582 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
SSBP1-205ENST00000465582 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
SSBP1-205ENST00000465582 PIK3R4Q99570 1358 aa9.32□□□□□ -0.92
SSBP1-205ENST00000465582 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
SSBP1-205ENST00000465582 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
SSBP1-205ENST00000465582 YTHDC2Q9H6S0 1430 aaKnown RBP9.31□□□□□ -0.92
SSBP1-205ENST00000465582 TMEM94Q12767 1356 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 KCNA6P17658 529 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSBP1-205ENST00000465582 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 TECPR2O15040 1411 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 CLSPNQ9HAW4 1339 aa9.3□□□□□ -0.92
SSBP1-205ENST00000465582 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
SSBP1-205ENST00000465582 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
SSBP1-205ENST00000465582 RBM33Q96EV2 1170 aaKnown RBP9.29□□□□□ -0.92
SSBP1-205ENST00000465582 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms