RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
SIK3-207ENST00000465421 ANTXR1Q9H6X2 564 aa8.38□□□□□ -1.07
SIK3-207ENST00000465421 KDM5AP29375 1690 aaKnown RBP8.37□□□□□ -1.07
SIK3-207ENST00000465421 RGS3P49796 1198 aa8.37□□□□□ -1.07
SIK3-207ENST00000465421 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
SIK3-207ENST00000465421 USP32Q8NFA0 1604 aa8.37□□□□□ -1.07
SIK3-207ENST00000465421 XRCC6P12956 609 aaKnown RBP eCLIP8.37□□□□□ -1.07
SIK3-207ENST00000465421 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
SIK3-207ENST00000465421 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
SIK3-207ENST00000465421 HSP90AA2PQ14568 343 aaPredicted RBP8.36□□□□□ -1.07
SIK3-207ENST00000465421 SIGLEC1Q9BZZ2 1709 aa8.36□□□□□ -1.07
SIK3-207ENST00000465421 DIP2CQ9Y2E4 1556 aa8.36□□□□□ -1.07
SIK3-207ENST00000465421 CARD11Q9BXL7 1154 aa8.35□□□□□ -1.07
SIK3-207ENST00000465421 ZNF521Q96K83 1311 aa8.35□□□□□ -1.07
SIK3-207ENST00000465421 SCAF11Q99590 1463 aaKnown RBP8.35□□□□□ -1.07
SIK3-207ENST00000465421 CC2D1BQ5T0F9 858 aaKnown RBP8.35□□□□□ -1.07
SIK3-207ENST00000465421 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
SIK3-207ENST00000465421 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
SIK3-207ENST00000465421 AAMPQ13685 434 aa8.34□□□□□ -1.07
SIK3-207ENST00000465421 SPAG9O60271 1321 aaKnown RBP8.34□□□□□ -1.07
SIK3-207ENST00000465421 ABCC3O15438 1527 aa8.34□□□□□ -1.07
SIK3-207ENST00000465421 HSP90AA1P07900 732 aaKnown RBP8.34□□□□□ -1.07
SIK3-207ENST00000465421 TESK2Q96S53 571 aa8.34□□□□□ -1.07
SIK3-207ENST00000465421 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
SIK3-207ENST00000465421 NAP1L5Q96NT1 182 aaPredicted RBP8.34□□□□□ -1.07
SIK3-207ENST00000465421 PLEKHH1Q9ULM0 1364 aa8.34□□□□□ -1.08
SIK3-207ENST00000465421 SEC24BO95487 1268 aa8.33□□□□□ -1.08
SIK3-207ENST00000465421 NPC1L1Q9UHC9 1359 aa8.33□□□□□ -1.08
SIK3-207ENST00000465421 PANK2Q9BZ23 570 aa8.32□□□□□ -1.08
SIK3-207ENST00000465421 ADGRB1O14514 1584 aa8.32□□□□□ -1.08
SIK3-207ENST00000465421 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
SIK3-207ENST00000465421 DISP3Q9P2K9 1392 aa8.32□□□□□ -1.08
SIK3-207ENST00000465421 SBNO2Q9Y2G9 1366 aa8.32□□□□□ -1.08
SIK3-207ENST00000465421 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 KANK1Q14678 1352 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
SIK3-207ENST00000465421 CENPJQ9HC77 1338 aaPredicted RBP8.31□□□□□ -1.08
SIK3-207ENST00000465421 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 BECN1Q14457 450 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 RGL3Q3MIN7 710 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 TRMT2AQ8IZ69 625 aaKnown RBP8.31□□□□□ -1.08
SIK3-207ENST00000465421 QRICH2Q9H0J4 1663 aa8.31□□□□□ -1.08
SIK3-207ENST00000465421 NOS1P29475 1434 aa8.3□□□□□ -1.08
SIK3-207ENST00000465421 ARHGEF28Q8N1W1 1705 aaKnown RBP8.3□□□□□ -1.08
SIK3-207ENST00000465421 TSPOAP1O95153 1857 aa8.3□□□□□ -1.08
SIK3-207ENST00000465421 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
SIK3-207ENST00000465421 SLKQ9H2G2 1235 aaPredicted RBP8.3□□□□□ -1.08
SIK3-207ENST00000465421 CLTCQ00610 1675 aaKnown RBP8.3□□□□□ -1.08
SIK3-207ENST00000465421 IGHDP01880 384 aa8.3□□□□□ -1.08
SIK3-207ENST00000465421 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 ADAMTS8Q9UP79 889 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 NEXMIFQ5QGS0 1516 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 ZMYM3Q14202 1370 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 UGGT1Q9NYU2 1555 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 AGLP35573 1532 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 ARHGEF40Q8TER5 1519 aa8.29□□□□□ -1.08
SIK3-207ENST00000465421 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.28□□□□□ -1.08
SIK3-207ENST00000465421 MCM4P33991 863 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 ASXL1Q8IXJ9 1541 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 PIK3C2GO75747 1445 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 ERVK-7P63135 1459 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 SLFN5Q08AF3 891 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 TBC1D2Q9BYX2 928 aa8.28□□□□□ -1.08
SIK3-207ENST00000465421 MRE11P49959 708 aa8.27□□□□□ -1.08
SIK3-207ENST00000465421 MAPK8IP3Q9UPT6 1336 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 NKTRP30414 1462 aaKnown RBP8.27□□□□□ -1.09
SIK3-207ENST00000465421 ESPNB1AK53 854 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 GOLGA2Q08379 1002 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 NBPF1Q3BBV0 1214 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 ZFYVE9O95405 1425 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 NPATQ14207 1427 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 ANKRD26Q9UPS8 1709 aa8.27□□□□□ -1.09
SIK3-207ENST00000465421 SHPRHQ149N8 1683 aa8.26□□□□□ -1.09
SIK3-207ENST00000465421 AFAP1Q8N556 730 aa8.26□□□□□ -1.09
SIK3-207ENST00000465421 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
SIK3-207ENST00000465421 TMEM131LA2VDJ0 1609 aa8.26□□□□□ -1.09
SIK3-207ENST00000465421 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
SIK3-207ENST00000465421 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
SIK3-207ENST00000465421 BCL11BQ9C0K0 894 aaPredicted RBP8.26□□□□□ -1.09
SIK3-207ENST00000465421 PDCL3Q9H2J4 239 aa8.26□□□□□ -1.09
SIK3-207ENST00000465421 TPM2P07951 284 aa8.25□□□□□ -1.09
SIK3-207ENST00000465421 MYO5BQ9ULV0 1848 aa8.25□□□□□ -1.09
SIK3-207ENST00000465421 GRPEL1Q9HAV7 217 aa8.25□□□□□ -1.09
SIK3-207ENST00000465421 PRDM4Q9UKN5 801 aa8.25□□□□□ -1.09
SIK3-207ENST00000465421 ISY1Q9ULR0 285 aaKnown RBP8.25□□□□□ -1.09
SIK3-207ENST00000465421 PANK3Q9H999 370 aa8.24□□□□□ -1.09
SIK3-207ENST00000465421 TRAK2O60296 914 aa8.24□□□□□ -1.09
SIK3-207ENST00000465421 CHRM1P11229 460 aaPredicted RBP8.24□□□□□ -1.09
SIK3-207ENST00000465421 SPINK5Q9NQ38 1064 aaPredicted RBP8.24□□□□□ -1.09
SIK3-207ENST00000465421 PPP6R1Q9UPN7 881 aa8.24□□□□□ -1.09
SIK3-207ENST00000465421 BCAR3O75815 825 aa8.24□□□□□ -1.09
SIK3-207ENST00000465421 CALD1Q05682 793 aaKnown RBP8.24□□□□□ -1.09
SIK3-207ENST00000465421 NINLQ9Y2I6 1382 aa8.24□□□□□ -1.09
SIK3-207ENST00000465421 ZNF692Q9BU19 519 aaPredicted RBP8.23□□□□□ -1.09
SIK3-207ENST00000465421 NCOA3Q9Y6Q9 1424 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 CGNL1Q0VF96 1302 aa8.23□□□□□ -1.09
SIK3-207ENST00000465421 RPGRIP1LQ68CZ1 1315 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms