RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
MMP11-206ENST00000465385 MAST1Q9Y2H9 1570 aa17.12■□□□□ 0.33
MMP11-206ENST00000465385 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
MMP11-206ENST00000465385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
MMP11-206ENST00000465385 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
MMP11-206ENST00000465385 MCM4P33991 863 aa17.12■□□□□ 0.33
MMP11-206ENST00000465385 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
MMP11-206ENST00000465385 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
MMP11-206ENST00000465385 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
MMP11-206ENST00000465385 TRAK2O60296 914 aa17.1■□□□□ 0.33
MMP11-206ENST00000465385 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
MMP11-206ENST00000465385 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
MMP11-206ENST00000465385 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
MMP11-206ENST00000465385 SCAPERQ9BY12 1400 aa17.09■□□□□ 0.33
MMP11-206ENST00000465385 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
MMP11-206ENST00000465385 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
MMP11-206ENST00000465385 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
MMP11-206ENST00000465385 UNC13BO14795 1591 aa17.08■□□□□ 0.32
MMP11-206ENST00000465385 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
MMP11-206ENST00000465385 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
MMP11-206ENST00000465385 SYNMO15061 1565 aa17.07■□□□□ 0.32
MMP11-206ENST00000465385 ATP10AO60312 1499 aa17.07■□□□□ 0.32
MMP11-206ENST00000465385 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
MMP11-206ENST00000465385 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
MMP11-206ENST00000465385 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
MMP11-206ENST00000465385 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
MMP11-206ENST00000465385 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 TRIM27P14373 513 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
MMP11-206ENST00000465385 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
MMP11-206ENST00000465385 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
MMP11-206ENST00000465385 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
MMP11-206ENST00000465385 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
MMP11-206ENST00000465385 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
MMP11-206ENST00000465385 LAMC1P11047 1609 aa17.04■□□□□ 0.32
MMP11-206ENST00000465385 MADDQ8WXG6 1647 aa17.04■□□□□ 0.32
MMP11-206ENST00000465385 PLCH2O75038 1416 aa17.03■□□□□ 0.32
MMP11-206ENST00000465385 RIPK4P57078 832 aa17.03■□□□□ 0.32
MMP11-206ENST00000465385 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
MMP11-206ENST00000465385 NOS1P29475 1434 aa17.03■□□□□ 0.32
MMP11-206ENST00000465385 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
MMP11-206ENST00000465385 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
MMP11-206ENST00000465385 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
MMP11-206ENST00000465385 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
MMP11-206ENST00000465385 APBB1O00213 710 aa17■□□□□ 0.31
MMP11-206ENST00000465385 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
MMP11-206ENST00000465385 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
MMP11-206ENST00000465385 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
MMP11-206ENST00000465385 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
MMP11-206ENST00000465385 CLTCL1P53675 1640 aa16.98■□□□□ 0.31
MMP11-206ENST00000465385 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
MMP11-206ENST00000465385 FBLN1P23142 703 aa16.98■□□□□ 0.31
MMP11-206ENST00000465385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
MMP11-206ENST00000465385 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
MMP11-206ENST00000465385 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
MMP11-206ENST00000465385 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
MMP11-206ENST00000465385 AAMPQ13685 434 aa16.97■□□□□ 0.31
MMP11-206ENST00000465385 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
MMP11-206ENST00000465385 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
MMP11-206ENST00000465385 PLXNC1O60486 1568 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 PTPRTO14522 1441 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 MRE11P49959 708 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 IQGAP1P46940 1657 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 HMOX1P09601 288 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 UBE2Q2Q8WVN8 375 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
MMP11-206ENST00000465385 TRPM2O94759 1503 aa16.95■□□□□ 0.3
MMP11-206ENST00000465385 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
MMP11-206ENST00000465385 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
MMP11-206ENST00000465385 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
MMP11-206ENST00000465385 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
MMP11-206ENST00000465385 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
MMP11-206ENST00000465385 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
MMP11-206ENST00000465385 DIAPH1O60610 1272 aaKnown RBP16.91■□□□□ 0.3
MMP11-206ENST00000465385 MYOM1P52179 1685 aa16.91■□□□□ 0.3
MMP11-206ENST00000465385 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 HSP90AA2PQ14568 343 aaPredicted RBP16.9■□□□□ 0.3
MMP11-206ENST00000465385 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 GLIPR1L2Q4G1C9 344 aa16.9■□□□□ 0.3
MMP11-206ENST00000465385 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
MMP11-206ENST00000465385 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
MMP11-206ENST00000465385 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
MMP11-206ENST00000465385 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
MMP11-206ENST00000465385 ESPNB1AK53 854 aa16.89■□□□□ 0.29
MMP11-206ENST00000465385 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
MMP11-206ENST00000465385 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
MMP11-206ENST00000465385 ABCC1P33527 1531 aa16.89■□□□□ 0.29
MMP11-206ENST00000465385 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
MMP11-206ENST00000465385 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
MMP11-206ENST00000465385 FANCAO15360 1455 aa16.88■□□□□ 0.29
MMP11-206ENST00000465385 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
MMP11-206ENST00000465385 SSFA2P28290 1259 aa16.88■□□□□ 0.29
MMP11-206ENST00000465385 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms