RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 LRRC59Q96AG4 307 aaKnown RBP32.14■■■□□ 2.74
EDEM1-205ENST00000465187 TECPR2O15040 1411 aa32.12■■■□□ 2.73
EDEM1-205ENST00000465187 LRPPRCP42704 1394 aaKnown RBP32.11■■■□□ 2.73
EDEM1-205ENST00000465187 AFF2P51816 1311 aa32.08■■■□□ 2.73
EDEM1-205ENST00000465187 NUTM2FA1L443 756 aa32.08■■■□□ 2.73
EDEM1-205ENST00000465187 SOS2Q07890 1332 aaPredicted RBP32.07■■■□□ 2.72
EDEM1-205ENST00000465187 ZNF772Q68DY9 489 aaPredicted RBP32.07■■■□□ 2.72
EDEM1-205ENST00000465187 NRXN1Q9ULB1 1477 aa32.06■■■□□ 2.72
EDEM1-205ENST00000465187 YTHDC2Q9H6S0 1430 aaKnown RBP32.06■■■□□ 2.72
EDEM1-205ENST00000465187 ABCC11Q96J66 1382 aa32.06■■■□□ 2.72
EDEM1-205ENST00000465187 FMN2Q9NZ56 1722 aa32.05■■■□□ 2.72
EDEM1-205ENST00000465187 C8orf37Q96NL8 207 aa32.04■■■□□ 2.72
EDEM1-205ENST00000465187 ESCO1Q5FWF5 840 aa32.03■■■□□ 2.72
EDEM1-205ENST00000465187 CFAP70Q5T0N1 1121 aa32.03■■■□□ 2.72
EDEM1-205ENST00000465187 RGPD8O14715 1765 aaPredicted RBP32.03■■■□□ 2.72
EDEM1-205ENST00000465187 MYOM2P54296 1465 aa32.03■■■□□ 2.72
EDEM1-205ENST00000465187 XPCQ01831 940 aaPredicted RBP32.02■■■□□ 2.72
EDEM1-205ENST00000465187 PXDNQ92626 1479 aa32.02■■■□□ 2.72
EDEM1-205ENST00000465187 ADAMTS2O95450 1211 aa32.01■■■□□ 2.71
EDEM1-205ENST00000465187 C14orf93Q9H972 538 aaKnown RBP32■■■□□ 2.71
EDEM1-205ENST00000465187 COL22A1Q8NFW1 1626 aaPredicted RBP32■■■□□ 2.71
EDEM1-205ENST00000465187 FOXO3O43524 673 aa31.95■■■□□ 2.71
EDEM1-205ENST00000465187 RXRBP28702 533 aa31.95■■■□□ 2.71
EDEM1-205ENST00000465187 ACIN1Q9UKV3 1341 aaKnown RBP31.92■■■□□ 2.7
EDEM1-205ENST00000465187 SAFB2Q14151 953 aaKnown RBP eCLIP31.91■■■□□ 2.7
EDEM1-205ENST00000465187 NPHP3Q7Z494 1330 aa31.91■■■□□ 2.7
EDEM1-205ENST00000465187 ADGRB1O14514 1584 aa31.9■■■□□ 2.7
EDEM1-205ENST00000465187 MARF1Q9Y4F3 1742 aaKnown RBP31.9■■■□□ 2.7
EDEM1-205ENST00000465187 RGS12O14924 1447 aa31.9■■■□□ 2.7
EDEM1-205ENST00000465187 NGLY1Q96IV0 654 aa31.89■■■□□ 2.7
EDEM1-205ENST00000465187 QTRT2Q9H974 415 aaKnown RBP31.88■■■□□ 2.69
EDEM1-205ENST00000465187 DHX57Q6P158 1386 aaKnown RBP31.88■■■□□ 2.69
EDEM1-205ENST00000465187 KIF1AQ12756 1690 aa31.88■■■□□ 2.69
EDEM1-205ENST00000465187 CDK12Q9NYV4 1490 aaPredicted RBP31.87■■■□□ 2.69
EDEM1-205ENST00000465187 PRAM1Q96QH2 718 aa31.87■■■□□ 2.69
EDEM1-205ENST00000465187 USP32Q8NFA0 1604 aa31.86■■■□□ 2.69
EDEM1-205ENST00000465187 UPF1Q92900 1129 aaKnown RBP eCLIP31.85■■■□□ 2.69
EDEM1-205ENST00000465187 KDM2AQ9Y2K7 1162 aa31.85■■■□□ 2.69
EDEM1-205ENST00000465187 SIRT1Q96EB6 747 aa31.84■■■□□ 2.69
EDEM1-205ENST00000465187 DLC1Q96QB1 1528 aa31.82■■■□□ 2.68
EDEM1-205ENST00000465187 DCAF11Q8TEB1 546 aa31.81■■■□□ 2.68
EDEM1-205ENST00000465187 RBM6P78332 1123 aaKnown RBP31.79■■■□□ 2.68
EDEM1-205ENST00000465187 USP21Q9UK80 565 aa31.79■■■□□ 2.68
EDEM1-205ENST00000465187 TRAK1Q9UPV9 953 aa31.78■■■□□ 2.68
EDEM1-205ENST00000465187 ADGRB2O60241 1585 aa31.77■■■□□ 2.68
EDEM1-205ENST00000465187 FNBP4Q8N3X1 1017 aaPredicted RBP31.76■■■□□ 2.67
EDEM1-205ENST00000465187 SPATA31A3Q5VYP0 1347 aa31.75■■■□□ 2.67
EDEM1-205ENST00000465187 KRT28Q7Z3Y7 464 aa31.75■■■□□ 2.67
EDEM1-205ENST00000465187 HIRIP3Q9BW71 556 aaPredicted RBP31.75■■■□□ 2.67
EDEM1-205ENST00000465187 ATRNO75882 1429 aa31.75■■■□□ 2.67
EDEM1-205ENST00000465187 BCL9LQ86UU0 1499 aa31.74■■■□□ 2.67
EDEM1-205ENST00000465187 POGKQ9P215 609 aa31.74■■■□□ 2.67
EDEM1-205ENST00000465187 PHF8Q9UPP1 1060 aa31.74■■■□□ 2.67
EDEM1-205ENST00000465187 HRCP23327 699 aa31.73■■■□□ 2.67
EDEM1-205ENST00000465187 ABCA3Q99758 1704 aa31.72■■■□□ 2.67
EDEM1-205ENST00000465187 ARHGEF28Q8N1W1 1705 aaKnown RBP31.72■■■□□ 2.67
EDEM1-205ENST00000465187 PLEKHG5O94827 1062 aa31.71■■■□□ 2.67
EDEM1-205ENST00000465187 MINK1Q8N4C8 1332 aaPredicted RBP31.7■■■□□ 2.66
EDEM1-205ENST00000465187 PMFBP1Q8TBY8 1022 aa31.69■■■□□ 2.66
EDEM1-205ENST00000465187 TNS3Q68CZ2 1445 aa31.68■■■□□ 2.66
EDEM1-205ENST00000465187 TRPC5Q9UL62 973 aaPredicted RBP31.68■■■□□ 2.66
EDEM1-205ENST00000465187 CABLES1Q8TDN4 633 aa31.67■■■□□ 2.66
EDEM1-205ENST00000465187 PRR36Q9H6K5 1346 aa31.67■■■□□ 2.66
EDEM1-205ENST00000465187 TRPM3Q9HCF6 1732 aaPredicted RBP31.66■■■□□ 2.66
EDEM1-205ENST00000465187 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.66■■■□□ 2.66
EDEM1-205ENST00000465187 ANKARQ7Z5J8 1434 aa31.65■■■□□ 2.66
EDEM1-205ENST00000465187 SLIT2O94813 1529 aa31.62■■■□□ 2.65
EDEM1-205ENST00000465187 PLCH1Q4KWH8 1693 aa31.62■■■□□ 2.65
EDEM1-205ENST00000465187 GLI3P10071 1580 aa31.61■■■□□ 2.65
EDEM1-205ENST00000465187 TULP4Q9NRJ4 1543 aa31.61■■■□□ 2.65
EDEM1-205ENST00000465187 LMOD2Q6P5Q4 547 aa31.59■■■□□ 2.65
EDEM1-205ENST00000465187 SBNO1A3KN83 1393 aa31.58■■■□□ 2.65
EDEM1-205ENST00000465187 ALS2Q96Q42 1657 aa31.58■■■□□ 2.65
EDEM1-205ENST00000465187 PSME1Q06323 249 aa31.58■■■□□ 2.65
EDEM1-205ENST00000465187 WASLO00401 505 aaPredicted RBP31.55■■■□□ 2.64
EDEM1-205ENST00000465187 RALGAPBQ86X10 1494 aa31.54■■■□□ 2.64
EDEM1-205ENST00000465187 GJD4Q96KN9 370 aaPredicted RBP31.54■■■□□ 2.64
EDEM1-205ENST00000465187 BRWD3Q6RI45 1802 aa31.54■■■□□ 2.64
EDEM1-205ENST00000465187 EP400Q96L91 3159 aa31.53■■■□□ 2.64
EDEM1-205ENST00000465187 KIAA1210Q9ULL0 1709 aa31.53■■■□□ 2.64
EDEM1-205ENST00000465187 CRYBG1Q9Y4K1 1723 aa31.52■■■□□ 2.64
EDEM1-205ENST00000465187 UNC5CLQ8IV45 518 aa31.52■■■□□ 2.64
EDEM1-205ENST00000465187 STAC3Q96MF2 364 aa31.52■■■□□ 2.64
EDEM1-205ENST00000465187 HAP1P54257 671 aaPredicted RBP31.51■■■□□ 2.63
EDEM1-205ENST00000465187 ATP7BP35670 1465 aa31.51■■■□□ 2.63
EDEM1-205ENST00000465187 NWD2Q9ULI1 1742 aa31.5■■■□□ 2.63
EDEM1-205ENST00000465187 NBPF1Q3BBV0 1214 aa31.5■■■□□ 2.63
EDEM1-205ENST00000465187 ATAD2Q6PL18 1390 aa31.5■■■□□ 2.63
EDEM1-205ENST00000465187 ITSN1Q15811 1721 aa31.49■■■□□ 2.63
EDEM1-205ENST00000465187 ARHGEF10O15013 1369 aa31.49■■■□□ 2.63
EDEM1-205ENST00000465187 NRAPQ86VF7 1730 aa31.47■■■□□ 2.63
EDEM1-205ENST00000465187 TOPAZ1Q8N9V7 1692 aa31.47■■■□□ 2.63
EDEM1-205ENST00000465187 EIF3AQ14152 1382 aaKnown RBP31.45■■■□□ 2.63
EDEM1-205ENST00000465187 FAM83GA6ND36 823 aa31.45■■■□□ 2.63
EDEM1-205ENST00000465187 GPRASP1Q5JY77 1395 aa31.43■■■□□ 2.62
EDEM1-205ENST00000465187 NUDT16Q96DE0 195 aaKnown RBP31.42■■■□□ 2.62
EDEM1-205ENST00000465187 NGDNQ8NEJ9 315 aaKnown RBP31.41■■■□□ 2.62
EDEM1-205ENST00000465187 CDK19Q9BWU1 502 aa31.41■■■□□ 2.62
EDEM1-205ENST00000465187 PAK3O75914 559 aaPredicted RBP31.38■■■□□ 2.61
EDEM1-205ENST00000465187 COL14A1Q05707 1796 aaKnown RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms