RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 FAM187AA6NFU0 413 aa11.77□□□□□ -0.53
UBR4-209ENST00000465036 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
UBR4-209ENST00000465036 USB1Q9BQ65 265 aaKnown RBP11.76□□□□□ -0.53
UBR4-209ENST00000465036 TOR4AQ9NXH8 423 aa11.76□□□□□ -0.53
UBR4-209ENST00000465036 ZBTB24O43167 697 aaPredicted RBP11.75□□□□□ -0.53
UBR4-209ENST00000465036 FOXC1Q12948 553 aa11.75□□□□□ -0.53
UBR4-209ENST00000465036 FAM217BQ9NTX9 383 aaPredicted RBP11.75□□□□□ -0.53
UBR4-209ENST00000465036 DXOO77932 396 aaKnown RBP11.74□□□□□ -0.53
UBR4-209ENST00000465036 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
UBR4-209ENST00000465036 HOXA2O43364 376 aa11.73□□□□□ -0.53
UBR4-209ENST00000465036 AVPP01185 164 aa11.72□□□□□ -0.53
UBR4-209ENST00000465036 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
UBR4-209ENST00000465036 WNT7AO00755 349 aa11.69□□□□□ -0.54
UBR4-209ENST00000465036 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
UBR4-209ENST00000465036 TRIM32Q13049 653 aa11.68□□□□□ -0.54
UBR4-209ENST00000465036 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
UBR4-209ENST00000465036 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
UBR4-209ENST00000465036 KRI1Q8N9T8 703 aaKnown RBP11.67□□□□□ -0.54
UBR4-209ENST00000465036 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
UBR4-209ENST00000465036 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
UBR4-209ENST00000465036 HLA-CQ95604 372 aa11.66□□□□□ -0.54
UBR4-209ENST00000465036 ZMYND10O75800 440 aa11.65□□□□□ -0.54
UBR4-209ENST00000465036 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
UBR4-209ENST00000465036 POTECB2RU33 542 aa11.63□□□□□ -0.55
UBR4-209ENST00000465036 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
UBR4-209ENST00000465036 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
UBR4-209ENST00000465036 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
UBR4-209ENST00000465036 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
UBR4-209ENST00000465036 JUNDP17535 347 aa11.62□□□□□ -0.55
UBR4-209ENST00000465036 AMHR2Q16671 573 aa11.62□□□□□ -0.55
UBR4-209ENST00000465036 TTC24A2A3L6 582 aaPredicted RBP11.61□□□□□ -0.55
UBR4-209ENST00000465036 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
UBR4-209ENST00000465036 WNT7BP56706 349 aa11.61□□□□□ -0.55
UBR4-209ENST00000465036 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
UBR4-209ENST00000465036 AXIN1O15169 862 aa11.59□□□□□ -0.55
UBR4-209ENST00000465036 FDX1P10109 184 aa11.59□□□□□ -0.55
UBR4-209ENST00000465036 SMPD1P17405 629 aa11.58□□□□□ -0.56
UBR4-209ENST00000465036 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
UBR4-209ENST00000465036 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
UBR4-209ENST00000465036 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
UBR4-209ENST00000465036 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
UBR4-209ENST00000465036 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
UBR4-209ENST00000465036 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
UBR4-209ENST00000465036 SKOR1P84550 965 aa11.55□□□□□ -0.56
UBR4-209ENST00000465036 RC3H1Q5TC82 1133 aaKnown RBP11.55□□□□□ -0.56
UBR4-209ENST00000465036 GJA5P36382 358 aa11.54□□□□□ -0.56
UBR4-209ENST00000465036 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
UBR4-209ENST00000465036 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
UBR4-209ENST00000465036 DACH1Q9UI36 760 aa11.54□□□□□ -0.56
UBR4-209ENST00000465036 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
UBR4-209ENST00000465036 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
UBR4-209ENST00000465036 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
UBR4-209ENST00000465036 DIXDC1Q155Q3 683 aa11.51□□□□□ -0.57
UBR4-209ENST00000465036 DESI1Q6ICB0 168 aa11.51□□□□□ -0.57
UBR4-209ENST00000465036 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
UBR4-209ENST00000465036 J3QL48 77 aa11.5□□□□□ -0.57
UBR4-209ENST00000465036 PTPRNQ16849 979 aa11.5□□□□□ -0.57
UBR4-209ENST00000465036 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
UBR4-209ENST00000465036 MS4A1P11836 297 aa11.49□□□□□ -0.57
UBR4-209ENST00000465036 PTCRAQ6ISU1 281 aaPredicted RBP11.49□□□□□ -0.57
UBR4-209ENST00000465036 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
UBR4-209ENST00000465036 NDUFV2P19404 249 aa11.48□□□□□ -0.57
UBR4-209ENST00000465036 LCE2AQ5TA79 106 aaPredicted RBP11.48□□□□□ -0.57
UBR4-209ENST00000465036 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
UBR4-209ENST00000465036 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
UBR4-209ENST00000465036 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
UBR4-209ENST00000465036 C11orf95C9JLR9 678 aaPredicted RBP11.46□□□□□ -0.57
UBR4-209ENST00000465036 SIAH2O43255 324 aa11.46□□□□□ -0.57
UBR4-209ENST00000465036 MTMR2Q13614 643 aa11.46□□□□□ -0.57
UBR4-209ENST00000465036 TRIM66O15016 1216 aa11.45□□□□□ -0.58
UBR4-209ENST00000465036 PRR7Q8TB68 274 aa11.45□□□□□ -0.58
UBR4-209ENST00000465036 HPS1Q92902 700 aa11.45□□□□□ -0.58
UBR4-209ENST00000465036 AK7Q96M32 723 aa11.45□□□□□ -0.58
UBR4-209ENST00000465036 ATP13A2Q9NQ11 1180 aa11.45□□□□□ -0.58
UBR4-209ENST00000465036 PARP9Q8IXQ6 854 aa11.44□□□□□ -0.58
UBR4-209ENST00000465036 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
UBR4-209ENST00000465036 TBC1D2Q9BYX2 928 aa11.43□□□□□ -0.58
UBR4-209ENST00000465036 SH3BP2P78314 561 aa11.42□□□□□ -0.58
UBR4-209ENST00000465036 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
UBR4-209ENST00000465036 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
UBR4-209ENST00000465036 EHBP1Q8NDI1 1231 aa11.42□□□□□ -0.58
UBR4-209ENST00000465036 SPTLC1O15269 473 aa11.41□□□□□ -0.58
UBR4-209ENST00000465036 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
UBR4-209ENST00000465036 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
UBR4-209ENST00000465036 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
UBR4-209ENST00000465036 MPNDQ8N594 471 aa11.4□□□□□ -0.58
UBR4-209ENST00000465036 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
UBR4-209ENST00000465036 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
UBR4-209ENST00000465036 LYPD8Q6UX82 237 aa11.38□□□□□ -0.59
UBR4-209ENST00000465036 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
UBR4-209ENST00000465036 BAP1Q92560 729 aa11.36□□□□□ -0.59
UBR4-209ENST00000465036 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
UBR4-209ENST00000465036 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
UBR4-209ENST00000465036 WFS1O76024 890 aa11.35□□□□□ -0.59
UBR4-209ENST00000465036 NFX1Q12986 1120 aaKnown RBP11.35□□□□□ -0.59
UBR4-209ENST00000465036 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
UBR4-209ENST00000465036 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
UBR4-209ENST00000465036 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
UBR4-209ENST00000465036 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
UBR4-209ENST00000465036 HRCP23327 699 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms