RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
APTX-213ENST00000465003 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
APTX-213ENST00000465003 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
APTX-213ENST00000465003 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
APTX-213ENST00000465003 ATF3P18847 181 aa16.9■□□□□ 0.3
APTX-213ENST00000465003 TOM1O60784 492 aa16.89■□□□□ 0.3
APTX-213ENST00000465003 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.3
APTX-213ENST00000465003 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
APTX-213ENST00000465003 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
APTX-213ENST00000465003 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
APTX-213ENST00000465003 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
APTX-213ENST00000465003 ILDR1Q86SU0 546 aaPredicted RBP16.88■□□□□ 0.29
APTX-213ENST00000465003 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
APTX-213ENST00000465003 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
APTX-213ENST00000465003 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
APTX-213ENST00000465003 MST1RQ04912 1400 aa16.86■□□□□ 0.29
APTX-213ENST00000465003 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
APTX-213ENST00000465003 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
APTX-213ENST00000465003 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
APTX-213ENST00000465003 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
APTX-213ENST00000465003 DDX17Q92841 729 aaKnown RBP16.84■□□□□ 0.29
APTX-213ENST00000465003 DCCP43146 1447 aa16.84■□□□□ 0.29
APTX-213ENST00000465003 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
APTX-213ENST00000465003 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
APTX-213ENST00000465003 USP47Q96K76 1375 aa16.83■□□□□ 0.28
APTX-213ENST00000465003 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
APTX-213ENST00000465003 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
APTX-213ENST00000465003 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
APTX-213ENST00000465003 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
APTX-213ENST00000465003 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
APTX-213ENST00000465003 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
APTX-213ENST00000465003 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
APTX-213ENST00000465003 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
APTX-213ENST00000465003 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
APTX-213ENST00000465003 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
APTX-213ENST00000465003 HSPA1LP34931 641 aa16.79■□□□□ 0.28
APTX-213ENST00000465003 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
APTX-213ENST00000465003 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
APTX-213ENST00000465003 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
APTX-213ENST00000465003 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
APTX-213ENST00000465003 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
APTX-213ENST00000465003 ATP7BP35670 1465 aa16.75■□□□□ 0.27
APTX-213ENST00000465003 TESK2Q96S53 571 aa16.75■□□□□ 0.27
APTX-213ENST00000465003 FOXO3O43524 673 aa16.74■□□□□ 0.27
APTX-213ENST00000465003 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
APTX-213ENST00000465003 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
APTX-213ENST00000465003 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
APTX-213ENST00000465003 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
APTX-213ENST00000465003 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
APTX-213ENST00000465003 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
APTX-213ENST00000465003 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.26
APTX-213ENST00000465003 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
APTX-213ENST00000465003 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
APTX-213ENST00000465003 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
APTX-213ENST00000465003 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
APTX-213ENST00000465003 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
APTX-213ENST00000465003 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
APTX-213ENST00000465003 PPIP5K1Q6PFW1 1433 aa16.68■□□□□ 0.26
APTX-213ENST00000465003 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
APTX-213ENST00000465003 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
APTX-213ENST00000465003 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
APTX-213ENST00000465003 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
APTX-213ENST00000465003 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
APTX-213ENST00000465003 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
APTX-213ENST00000465003 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
APTX-213ENST00000465003 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
APTX-213ENST00000465003 ACEP12821 1306 aa16.64■□□□□ 0.25
APTX-213ENST00000465003 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
APTX-213ENST00000465003 PXDNQ92626 1479 aa16.64■□□□□ 0.25
APTX-213ENST00000465003 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
APTX-213ENST00000465003 TMF1P82094 1093 aa16.63■□□□□ 0.25
APTX-213ENST00000465003 PSME1Q06323 249 aa16.63■□□□□ 0.25
APTX-213ENST00000465003 SLC12A5Q9H2X9 1139 aa16.63■□□□□ 0.25
APTX-213ENST00000465003 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
APTX-213ENST00000465003 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
APTX-213ENST00000465003 KRT28Q7Z3Y7 464 aa16.62■□□□□ 0.25
APTX-213ENST00000465003 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
APTX-213ENST00000465003 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
APTX-213ENST00000465003 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
APTX-213ENST00000465003 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
APTX-213ENST00000465003 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.25
APTX-213ENST00000465003 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.25
APTX-213ENST00000465003 MYOM1P52179 1685 aa16.58■□□□□ 0.24
APTX-213ENST00000465003 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-213ENST00000465003 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-213ENST00000465003 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
APTX-213ENST00000465003 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
APTX-213ENST00000465003 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
APTX-213ENST00000465003 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
APTX-213ENST00000465003 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
APTX-213ENST00000465003 JCADQ9P266 1359 aa16.56■□□□□ 0.24
APTX-213ENST00000465003 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
APTX-213ENST00000465003 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
APTX-213ENST00000465003 AKAP12Q02952 1782 aa16.55■□□□□ 0.24
APTX-213ENST00000465003 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
APTX-213ENST00000465003 USP6P35125 1406 aa16.55■□□□□ 0.24
APTX-213ENST00000465003 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
APTX-213ENST00000465003 LRP6O75581 1613 aa16.54■□□□□ 0.24
APTX-213ENST00000465003 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
APTX-213ENST00000465003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms