RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
PTPN7-205ENST00000464870 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
PTPN7-205ENST00000464870 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
PTPN7-205ENST00000464870 ADGRB1O14514 1584 aa17.42■□□□□ 0.38
PTPN7-205ENST00000464870 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
PTPN7-205ENST00000464870 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTPN7-205ENST00000464870 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-205ENST00000464870 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-205ENST00000464870 DLC1Q96QB1 1528 aa17.38■□□□□ 0.37
PTPN7-205ENST00000464870 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
PTPN7-205ENST00000464870 GPRASP1Q5JY77 1395 aa17.38■□□□□ 0.37
PTPN7-205ENST00000464870 MST1RQ04912 1400 aa17.38■□□□□ 0.37
PTPN7-205ENST00000464870 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
PTPN7-205ENST00000464870 KNDC1Q76NI1 1749 aa17.37■□□□□ 0.37
PTPN7-205ENST00000464870 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
PTPN7-205ENST00000464870 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPN7-205ENST00000464870 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
PTPN7-205ENST00000464870 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
PTPN7-205ENST00000464870 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-205ENST00000464870 USP47Q96K76 1375 aa17.34■□□□□ 0.37
PTPN7-205ENST00000464870 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
PTPN7-205ENST00000464870 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
PTPN7-205ENST00000464870 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
PTPN7-205ENST00000464870 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
PTPN7-205ENST00000464870 CDC42BPGQ6DT37 1551 aa17.32■□□□□ 0.36
PTPN7-205ENST00000464870 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
PTPN7-205ENST00000464870 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
PTPN7-205ENST00000464870 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-205ENST00000464870 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-205ENST00000464870 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
PTPN7-205ENST00000464870 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
PTPN7-205ENST00000464870 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
PTPN7-205ENST00000464870 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
PTPN7-205ENST00000464870 FOXO3O43524 673 aa17.24■□□□□ 0.35
PTPN7-205ENST00000464870 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
PTPN7-205ENST00000464870 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
PTPN7-205ENST00000464870 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-205ENST00000464870 JCADQ9P266 1359 aa17.24■□□□□ 0.35
PTPN7-205ENST00000464870 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
PTPN7-205ENST00000464870 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-205ENST00000464870 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
PTPN7-205ENST00000464870 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
PTPN7-205ENST00000464870 TESK2Q96S53 571 aa17.22■□□□□ 0.35
PTPN7-205ENST00000464870 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
PTPN7-205ENST00000464870 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
PTPN7-205ENST00000464870 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
PTPN7-205ENST00000464870 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.34
PTPN7-205ENST00000464870 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
PTPN7-205ENST00000464870 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
PTPN7-205ENST00000464870 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
PTPN7-205ENST00000464870 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
PTPN7-205ENST00000464870 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
PTPN7-205ENST00000464870 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-205ENST00000464870 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-205ENST00000464870 PSME1Q06323 249 aa17.18■□□□□ 0.34
PTPN7-205ENST00000464870 KRT28Q7Z3Y7 464 aa17.18■□□□□ 0.34
PTPN7-205ENST00000464870 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
PTPN7-205ENST00000464870 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
PTPN7-205ENST00000464870 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
PTPN7-205ENST00000464870 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
PTPN7-205ENST00000464870 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
PTPN7-205ENST00000464870 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
PTPN7-205ENST00000464870 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
PTPN7-205ENST00000464870 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
PTPN7-205ENST00000464870 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
PTPN7-205ENST00000464870 TMF1P82094 1093 aa17.14■□□□□ 0.33
PTPN7-205ENST00000464870 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
PTPN7-205ENST00000464870 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
PTPN7-205ENST00000464870 ATP7BP35670 1465 aa17.13■□□□□ 0.33
PTPN7-205ENST00000464870 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-205ENST00000464870 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-205ENST00000464870 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-205ENST00000464870 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-205ENST00000464870 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
PTPN7-205ENST00000464870 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
PTPN7-205ENST00000464870 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
PTPN7-205ENST00000464870 CCDC7Q96M83 1385 aa17.13■□□□□ 0.33
PTPN7-205ENST00000464870 PXDNQ92626 1479 aa17.12■□□□□ 0.33
PTPN7-205ENST00000464870 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
PTPN7-205ENST00000464870 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
PTPN7-205ENST00000464870 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
PTPN7-205ENST00000464870 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
PTPN7-205ENST00000464870 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-205ENST00000464870 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
PTPN7-205ENST00000464870 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
PTPN7-205ENST00000464870 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
PTPN7-205ENST00000464870 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
PTPN7-205ENST00000464870 ACEP12821 1306 aa17.09■□□□□ 0.33
PTPN7-205ENST00000464870 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
PTPN7-205ENST00000464870 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
PTPN7-205ENST00000464870 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
PTPN7-205ENST00000464870 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-205ENST00000464870 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-205ENST00000464870 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
PTPN7-205ENST00000464870 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
PTPN7-205ENST00000464870 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
PTPN7-205ENST00000464870 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
PTPN7-205ENST00000464870 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
PTPN7-205ENST00000464870 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
PTPN7-205ENST00000464870 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms