RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PPLO60437 1756 aa17.15■□□□□ 0.34
SSR3-202ENST00000463503 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
SSR3-202ENST00000463503 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
SSR3-202ENST00000463503 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
SSR3-202ENST00000463503 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
SSR3-202ENST00000463503 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
SSR3-202ENST00000463503 APLP2Q06481 763 aa17.11■□□□□ 0.33
SSR3-202ENST00000463503 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
SSR3-202ENST00000463503 NUP155O75694 1391 aa17.11■□□□□ 0.33
SSR3-202ENST00000463503 FOXD1Q16676 465 aa17.1■□□□□ 0.33
SSR3-202ENST00000463503 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
SSR3-202ENST00000463503 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
SSR3-202ENST00000463503 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
SSR3-202ENST00000463503 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.32
SSR3-202ENST00000463503 SLIT2O94813 1529 aa17.07■□□□□ 0.32
SSR3-202ENST00000463503 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
SSR3-202ENST00000463503 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
SSR3-202ENST00000463503 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SSR3-202ENST00000463503 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
SSR3-202ENST00000463503 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
SSR3-202ENST00000463503 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
SSR3-202ENST00000463503 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
SSR3-202ENST00000463503 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
SSR3-202ENST00000463503 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
SSR3-202ENST00000463503 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
SSR3-202ENST00000463503 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
SSR3-202ENST00000463503 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
SSR3-202ENST00000463503 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
SSR3-202ENST00000463503 NAIPQ13075 1403 aa16.96■□□□□ 0.31
SSR3-202ENST00000463503 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
SSR3-202ENST00000463503 TECPR2O15040 1411 aa16.96■□□□□ 0.3
SSR3-202ENST00000463503 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
SSR3-202ENST00000463503 ESCO1Q5FWF5 840 aa16.94■□□□□ 0.3
SSR3-202ENST00000463503 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
SSR3-202ENST00000463503 FOXO3O43524 673 aa16.93■□□□□ 0.3
SSR3-202ENST00000463503 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
SSR3-202ENST00000463503 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
SSR3-202ENST00000463503 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
SSR3-202ENST00000463503 SPATA31A3Q5VYP0 1347 aa16.91■□□□□ 0.3
SSR3-202ENST00000463503 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
SSR3-202ENST00000463503 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
SSR3-202ENST00000463503 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
SSR3-202ENST00000463503 HRCP23327 699 aa16.89■□□□□ 0.29
SSR3-202ENST00000463503 SEPT12Q8IYM1 358 aa16.89■□□□□ 0.29
SSR3-202ENST00000463503 RREB1Q92766 1687 aa16.88■□□□□ 0.29
SSR3-202ENST00000463503 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
SSR3-202ENST00000463503 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
SSR3-202ENST00000463503 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
SSR3-202ENST00000463503 VPS72Q15906 364 aa16.87■□□□□ 0.29
SSR3-202ENST00000463503 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
SSR3-202ENST00000463503 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
SSR3-202ENST00000463503 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
SSR3-202ENST00000463503 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
SSR3-202ENST00000463503 ITGAEP38570 1179 aa16.85■□□□□ 0.29
SSR3-202ENST00000463503 RPGRIP1LQ68CZ1 1315 aa16.85■□□□□ 0.29
SSR3-202ENST00000463503 DISP2A7MBM2 1401 aa16.85■□□□□ 0.29
SSR3-202ENST00000463503 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
SSR3-202ENST00000463503 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
SSR3-202ENST00000463503 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
SSR3-202ENST00000463503 KRT27Q7Z3Y8 459 aa16.84■□□□□ 0.29
SSR3-202ENST00000463503 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
SSR3-202ENST00000463503 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
SSR3-202ENST00000463503 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
SSR3-202ENST00000463503 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
SSR3-202ENST00000463503 BAG6P46379 1132 aa16.8■□□□□ 0.28
SSR3-202ENST00000463503 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
SSR3-202ENST00000463503 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
SSR3-202ENST00000463503 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
SSR3-202ENST00000463503 SBNO1A3KN83 1393 aa16.78■□□□□ 0.28
SSR3-202ENST00000463503 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
SSR3-202ENST00000463503 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
SSR3-202ENST00000463503 PHRF1Q9P1Y6 1649 aaKnown RBP16.77■□□□□ 0.27
SSR3-202ENST00000463503 ARHGEF10O15013 1369 aa16.77■□□□□ 0.27
SSR3-202ENST00000463503 UTRNP46939 3433 aa16.76■□□□□ 0.27
SSR3-202ENST00000463503 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
SSR3-202ENST00000463503 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
SSR3-202ENST00000463503 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
SSR3-202ENST00000463503 STK26Q9P289 416 aa16.75■□□□□ 0.27
SSR3-202ENST00000463503 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
SSR3-202ENST00000463503 FAM83GA6ND36 823 aa16.74■□□□□ 0.27
SSR3-202ENST00000463503 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
SSR3-202ENST00000463503 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
SSR3-202ENST00000463503 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
SSR3-202ENST00000463503 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
SSR3-202ENST00000463503 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
SSR3-202ENST00000463503 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
SSR3-202ENST00000463503 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
SSR3-202ENST00000463503 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
SSR3-202ENST00000463503 RGPD4Q7Z3J3 1758 aa16.71■□□□□ 0.27
SSR3-202ENST00000463503 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 A0A0G2JS52 829 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 MYT1Q01538 1121 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
SSR3-202ENST00000463503 PSME1Q06323 249 aa16.69■□□□□ 0.26
SSR3-202ENST00000463503 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
SSR3-202ENST00000463503 SPATA31A5Q5VU36 1347 aa16.69■□□□□ 0.26
SSR3-202ENST00000463503 SPATA31A7Q8IWB4 1347 aa16.69■□□□□ 0.26
SSR3-202ENST00000463503 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 259.7 ms