RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
SHQ1-203ENST00000463369 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
SHQ1-203ENST00000463369 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
SHQ1-203ENST00000463369 NEFMP07197 916 aa11.54□□□□□ -0.56
SHQ1-203ENST00000463369 CCDC82Q8N4S0 544 aa11.54□□□□□ -0.56
SHQ1-203ENST00000463369 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
SHQ1-203ENST00000463369 SPATA31D1Q6ZQQ2 1576 aa11.54□□□□□ -0.56
SHQ1-203ENST00000463369 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
SHQ1-203ENST00000463369 UGGT1Q9NYU2 1555 aa11.53□□□□□ -0.56
SHQ1-203ENST00000463369 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
SHQ1-203ENST00000463369 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
SHQ1-203ENST00000463369 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.56
SHQ1-203ENST00000463369 SETD1BQ9UPS6 1966 aaKnown RBP11.52□□□□□ -0.56
SHQ1-203ENST00000463369 MFAP1P55081 439 aaKnown RBP11.52□□□□□ -0.57
SHQ1-203ENST00000463369 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
SHQ1-203ENST00000463369 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
SHQ1-203ENST00000463369 IFT172Q9UG01 1749 aa11.51□□□□□ -0.57
SHQ1-203ENST00000463369 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
SHQ1-203ENST00000463369 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
SHQ1-203ENST00000463369 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
SHQ1-203ENST00000463369 PRKRIP1Q9H875 184 aaPredicted RBP11.5□□□□□ -0.57
SHQ1-203ENST00000463369 SPATA31E1Q6ZUB1 1445 aa11.5□□□□□ -0.57
SHQ1-203ENST00000463369 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
SHQ1-203ENST00000463369 PPLO60437 1756 aa11.49□□□□□ -0.57
SHQ1-203ENST00000463369 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
SHQ1-203ENST00000463369 MRS2Q9HD23 443 aa11.49□□□□□ -0.57
SHQ1-203ENST00000463369 SLC52A1Q9NWF4 448 aa11.49□□□□□ -0.57
SHQ1-203ENST00000463369 KDM5AP29375 1690 aaKnown RBP11.49□□□□□ -0.57
SHQ1-203ENST00000463369 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
SHQ1-203ENST00000463369 TMEM131LA2VDJ0 1609 aa11.48□□□□□ -0.57
SHQ1-203ENST00000463369 ADGRB3O60242 1522 aa11.48□□□□□ -0.57
SHQ1-203ENST00000463369 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
SHQ1-203ENST00000463369 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
SHQ1-203ENST00000463369 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
SHQ1-203ENST00000463369 TRAIPQ9BWF2 469 aa11.47□□□□□ -0.57
SHQ1-203ENST00000463369 IDI1Q13907 227 aa11.47□□□□□ -0.57
SHQ1-203ENST00000463369 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.58
SHQ1-203ENST00000463369 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
SHQ1-203ENST00000463369 GSE1Q14687 1217 aa11.45□□□□□ -0.58
SHQ1-203ENST00000463369 RGL3Q3MIN7 710 aa11.45□□□□□ -0.58
SHQ1-203ENST00000463369 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
SHQ1-203ENST00000463369 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
SHQ1-203ENST00000463369 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
SHQ1-203ENST00000463369 TNRQ92752 1358 aa11.45□□□□□ -0.58
SHQ1-203ENST00000463369 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
SHQ1-203ENST00000463369 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHQ1-203ENST00000463369 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
SHQ1-203ENST00000463369 MYO3AQ8NEV4 1616 aa11.43□□□□□ -0.58
SHQ1-203ENST00000463369 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
SHQ1-203ENST00000463369 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
SHQ1-203ENST00000463369 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
SHQ1-203ENST00000463369 NLRP1Q9C000 1473 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 E9PSI1 815 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 PDE4AP27815 886 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
SHQ1-203ENST00000463369 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 PTPRMP28827 1452 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 KIAA1210Q9ULL0 1709 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 NEXMIFQ5QGS0 1516 aa11.42□□□□□ -0.58
SHQ1-203ENST00000463369 ZNF142P52746 1687 aaPredicted RBP11.41□□□□□ -0.58
SHQ1-203ENST00000463369 RPGRIP1LQ68CZ1 1315 aa11.41□□□□□ -0.58
SHQ1-203ENST00000463369 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
SHQ1-203ENST00000463369 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
SHQ1-203ENST00000463369 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
SHQ1-203ENST00000463369 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
SHQ1-203ENST00000463369 MYOM2P54296 1465 aa11.4□□□□□ -0.58
SHQ1-203ENST00000463369 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
SHQ1-203ENST00000463369 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
SHQ1-203ENST00000463369 MS4A1P11836 297 aa11.39□□□□□ -0.59
SHQ1-203ENST00000463369 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
SHQ1-203ENST00000463369 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
SHQ1-203ENST00000463369 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
SHQ1-203ENST00000463369 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
SHQ1-203ENST00000463369 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
SHQ1-203ENST00000463369 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
SHQ1-203ENST00000463369 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
SHQ1-203ENST00000463369 BCL11BQ9C0K0 894 aaPredicted RBP11.37□□□□□ -0.59
SHQ1-203ENST00000463369 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 NFKBIBQ15653 356 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 FAM43AQ8N2R8 423 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
SHQ1-203ENST00000463369 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
SHQ1-203ENST00000463369 LAMC1P11047 1609 aa11.36□□□□□ -0.59
SHQ1-203ENST00000463369 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
SHQ1-203ENST00000463369 ADGRF5Q8IZF2 1346 aa11.35□□□□□ -0.59
SHQ1-203ENST00000463369 RIMS2Q9UQ26 1411 aa11.34□□□□□ -0.59
SHQ1-203ENST00000463369 SLIT1O75093 1534 aa11.34□□□□□ -0.59
SHQ1-203ENST00000463369 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHQ1-203ENST00000463369 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
SHQ1-203ENST00000463369 ARHGAP23Q9P227 1491 aa11.33□□□□□ -0.6
SHQ1-203ENST00000463369 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
SHQ1-203ENST00000463369 SETD1AO15047 1707 aaKnown RBP11.33□□□□□ -0.6
SHQ1-203ENST00000463369 THEMISQ8N1K5 641 aaPredicted RBP11.32□□□□□ -0.6
SHQ1-203ENST00000463369 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
SHQ1-203ENST00000463369 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
SHQ1-203ENST00000463369 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
SHQ1-203ENST00000463369 SETBP1Q9Y6X0 1596 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms