RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
PTPN7-204ENST00000462815 MYOM2P54296 1465 aa16.9■□□□□ 0.3
PTPN7-204ENST00000462815 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
PTPN7-204ENST00000462815 FOXD1Q16676 465 aa16.88■□□□□ 0.29
PTPN7-204ENST00000462815 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
PTPN7-204ENST00000462815 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
PTPN7-204ENST00000462815 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
PTPN7-204ENST00000462815 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
PTPN7-204ENST00000462815 ATRNO75882 1429 aa16.85■□□□□ 0.29
PTPN7-204ENST00000462815 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
PTPN7-204ENST00000462815 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-204ENST00000462815 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
PTPN7-204ENST00000462815 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
PTPN7-204ENST00000462815 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
PTPN7-204ENST00000462815 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
PTPN7-204ENST00000462815 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
PTPN7-204ENST00000462815 BCL9LQ86UU0 1499 aa16.82■□□□□ 0.28
PTPN7-204ENST00000462815 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
PTPN7-204ENST00000462815 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
PTPN7-204ENST00000462815 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
PTPN7-204ENST00000462815 NGLY1Q96IV0 654 aa16.81■□□□□ 0.28
PTPN7-204ENST00000462815 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
PTPN7-204ENST00000462815 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
PTPN7-204ENST00000462815 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
PTPN7-204ENST00000462815 USP21Q9UK80 565 aa16.79■□□□□ 0.28
PTPN7-204ENST00000462815 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
PTPN7-204ENST00000462815 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
PTPN7-204ENST00000462815 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
PTPN7-204ENST00000462815 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
PTPN7-204ENST00000462815 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-204ENST00000462815 FOXO3O43524 673 aa16.76■□□□□ 0.27
PTPN7-204ENST00000462815 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
PTPN7-204ENST00000462815 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
PTPN7-204ENST00000462815 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
PTPN7-204ENST00000462815 SLIT2O94813 1529 aa16.75■□□□□ 0.27
PTPN7-204ENST00000462815 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
PTPN7-204ENST00000462815 STK26Q9P289 416 aa16.75■□□□□ 0.27
PTPN7-204ENST00000462815 GLI3P10071 1580 aa16.74■□□□□ 0.27
PTPN7-204ENST00000462815 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PTPN7-204ENST00000462815 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
PTPN7-204ENST00000462815 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
PTPN7-204ENST00000462815 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-204ENST00000462815 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
PTPN7-204ENST00000462815 C14orf93Q9H972 538 aaKnown RBP16.72■□□□□ 0.27
PTPN7-204ENST00000462815 ABCA3Q99758 1704 aa16.72■□□□□ 0.27
PTPN7-204ENST00000462815 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
PTPN7-204ENST00000462815 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
PTPN7-204ENST00000462815 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
PTPN7-204ENST00000462815 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
PTPN7-204ENST00000462815 TNS3Q68CZ2 1445 aa16.69■□□□□ 0.26
PTPN7-204ENST00000462815 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-204ENST00000462815 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
PTPN7-204ENST00000462815 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
PTPN7-204ENST00000462815 TRPM3Q9HCF6 1732 aaPredicted RBP16.66■□□□□ 0.26
PTPN7-204ENST00000462815 NWD2Q9ULI1 1742 aa16.65■□□□□ 0.26
PTPN7-204ENST00000462815 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
PTPN7-204ENST00000462815 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
PTPN7-204ENST00000462815 BRWD3Q6RI45 1802 aa16.65■□□□□ 0.26
PTPN7-204ENST00000462815 SBNO1A3KN83 1393 aa16.64■□□□□ 0.26
PTPN7-204ENST00000462815 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
PTPN7-204ENST00000462815 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
PTPN7-204ENST00000462815 ANKARQ7Z5J8 1434 aa16.63■□□□□ 0.25
PTPN7-204ENST00000462815 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
PTPN7-204ENST00000462815 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
PTPN7-204ENST00000462815 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
PTPN7-204ENST00000462815 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
PTPN7-204ENST00000462815 CRYBG1Q9Y4K1 1723 aa16.62■□□□□ 0.25
PTPN7-204ENST00000462815 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
PTPN7-204ENST00000462815 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
PTPN7-204ENST00000462815 CABLES1Q8TDN4 633 aa16.6■□□□□ 0.25
PTPN7-204ENST00000462815 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-204ENST00000462815 ARHGEF10O15013 1369 aa16.59■□□□□ 0.25
PTPN7-204ENST00000462815 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-204ENST00000462815 VPS72Q15906 364 aa16.58■□□□□ 0.24
PTPN7-204ENST00000462815 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
PTPN7-204ENST00000462815 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
PTPN7-204ENST00000462815 PSME1Q06323 249 aa16.57■□□□□ 0.24
PTPN7-204ENST00000462815 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN7-204ENST00000462815 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
PTPN7-204ENST00000462815 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
PTPN7-204ENST00000462815 PMFBP1Q8TBY8 1022 aa16.55■□□□□ 0.24
PTPN7-204ENST00000462815 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
PTPN7-204ENST00000462815 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
PTPN7-204ENST00000462815 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
PTPN7-204ENST00000462815 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
PTPN7-204ENST00000462815 POGKQ9P215 609 aa16.52■□□□□ 0.24
PTPN7-204ENST00000462815 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.24
PTPN7-204ENST00000462815 ATP7BP35670 1465 aa16.52■□□□□ 0.23
PTPN7-204ENST00000462815 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
PTPN7-204ENST00000462815 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
PTPN7-204ENST00000462815 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-204ENST00000462815 EIF3AQ14152 1382 aaKnown RBP16.5■□□□□ 0.23
PTPN7-204ENST00000462815 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
PTPN7-204ENST00000462815 MINK1Q8N4C8 1332 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-204ENST00000462815 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
PTPN7-204ENST00000462815 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
PTPN7-204ENST00000462815 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
PTPN7-204ENST00000462815 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-204ENST00000462815 LRP5O75197 1615 aa16.48■□□□□ 0.23
PTPN7-204ENST00000462815 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms