RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 WAPLQ7Z5K2 1190 aa27.5■■□□□ 1.99
PTPN18-207ENST00000462321 HSPA2P54652 639 aa27.5■■□□□ 1.99
PTPN18-207ENST00000462321 PUS7Q96PZ0 661 aaKnown RBP27.49■■□□□ 1.99
PTPN18-207ENST00000462321 MINK1Q8N4C8 1332 aaPredicted RBP27.47■■□□□ 1.99
PTPN18-207ENST00000462321 CHD2O14647 1828 aaKnown RBP27.42■■□□□ 1.98
PTPN18-207ENST00000462321 MYOM1P52179 1685 aa27.42■■□□□ 1.98
PTPN18-207ENST00000462321 MIER1Q8N108 512 aa27.41■■□□□ 1.98
PTPN18-207ENST00000462321 KCNA6P17658 529 aa27.41■■□□□ 1.98
PTPN18-207ENST00000462321 ADGRB2O60241 1585 aa27.4■■□□□ 1.98
PTPN18-207ENST00000462321 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
PTPN18-207ENST00000462321 ATAD2Q6PL18 1390 aa27.38■■□□□ 1.97
PTPN18-207ENST00000462321 ANP32CO43423 234 aa27.37■■□□□ 1.97
PTPN18-207ENST00000462321 SRPK2P78362 688 aaKnown RBP27.37■■□□□ 1.97
PTPN18-207ENST00000462321 CDK19Q9BWU1 502 aa27.36■■□□□ 1.97
PTPN18-207ENST00000462321 CABP2Q9NPB3 220 aa27.36■■□□□ 1.97
PTPN18-207ENST00000462321 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
PTPN18-207ENST00000462321 STRCQ7RTU9 1775 aa27.36■■□□□ 1.97
PTPN18-207ENST00000462321 PANK3Q9H999 370 aa27.36■■□□□ 1.97
PTPN18-207ENST00000462321 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
PTPN18-207ENST00000462321 NINLQ9Y2I6 1382 aa27.35■■□□□ 1.97
PTPN18-207ENST00000462321 NKTRP30414 1462 aaKnown RBP27.31■■□□□ 1.96
PTPN18-207ENST00000462321 PER1O15534 1290 aaPredicted RBP27.3■■□□□ 1.96
PTPN18-207ENST00000462321 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
PTPN18-207ENST00000462321 SLC12A5Q9H2X9 1139 aa27.27■■□□□ 1.96
PTPN18-207ENST00000462321 ANKRD36BQ8N2N9 1353 aa27.25■■□□□ 1.95
PTPN18-207ENST00000462321 PRKRIP1Q9H875 184 aaPredicted RBP27.24■■□□□ 1.95
PTPN18-207ENST00000462321 ATP7BP35670 1465 aa27.24■■□□□ 1.95
PTPN18-207ENST00000462321 KNSTRNQ9Y448 316 aa27.22■■□□□ 1.95
PTPN18-207ENST00000462321 ADGRL3Q9HAR2 1447 aa27.22■■□□□ 1.95
PTPN18-207ENST00000462321 CDC42BPGQ6DT37 1551 aa27.21■■□□□ 1.95
PTPN18-207ENST00000462321 NUDT16Q96DE0 195 aaKnown RBP27.21■■□□□ 1.95
PTPN18-207ENST00000462321 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
PTPN18-207ENST00000462321 KTN1Q86UP2 1357 aaKnown RBP27.2■■□□□ 1.94
PTPN18-207ENST00000462321 DMRT2Q9Y5R5 561 aa27.19■■□□□ 1.94
PTPN18-207ENST00000462321 CCDC61Q9Y6R9 512 aa27.19■■□□□ 1.94
PTPN18-207ENST00000462321 CARD14Q9BXL6 1004 aa27.19■■□□□ 1.94
PTPN18-207ENST00000462321 PRR36Q9H6K5 1346 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 PPIP5K1Q6PFW1 1433 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 CD163L1Q9NR16 1453 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 PROSER2Q86WR7 435 aaPredicted RBP27.18■■□□□ 1.94
PTPN18-207ENST00000462321 TERF2IPQ9NYB0 399 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 CABP1Q9NZU7 370 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 A0A1W2PP64 1363 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 NPC1L1Q9UHC9 1359 aa27.18■■□□□ 1.94
PTPN18-207ENST00000462321 STRCP1A6NGW2 1772 aa27.17■■□□□ 1.94
PTPN18-207ENST00000462321 CCER2I3L3R5 266 aa27.17■■□□□ 1.94
PTPN18-207ENST00000462321 NSD3Q9BZ95 1437 aa27.17■■□□□ 1.94
PTPN18-207ENST00000462321 ANKARQ7Z5J8 1434 aa27.16■■□□□ 1.94
PTPN18-207ENST00000462321 TOPAZ1Q8N9V7 1692 aa27.16■■□□□ 1.94
PTPN18-207ENST00000462321 AMER1Q5JTC6 1135 aaPredicted RBP27.16■■□□□ 1.94
PTPN18-207ENST00000462321 NCOA3Q9Y6Q9 1424 aa27.15■■□□□ 1.94
PTPN18-207ENST00000462321 FMN2Q9NZ56 1722 aa27.15■■□□□ 1.94
PTPN18-207ENST00000462321 RALBP1Q15311 655 aa27.14■■□□□ 1.94
PTPN18-207ENST00000462321 USP32Q8NFA0 1604 aa27.14■■□□□ 1.93
PTPN18-207ENST00000462321 PARD3Q8TEW0 1356 aa27.13■■□□□ 1.93
PTPN18-207ENST00000462321 HDGFL2Q7Z4V5 671 aaPredicted RBP27.13■■□□□ 1.93
PTPN18-207ENST00000462321 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
PTPN18-207ENST00000462321 C14orf37Q86TY3 774 aa27.11■■□□□ 1.93
PTPN18-207ENST00000462321 CPSF1Q10570 1443 aaKnown RBP27.11■■□□□ 1.93
PTPN18-207ENST00000462321 TMEM94Q12767 1356 aa27.11■■□□□ 1.93
PTPN18-207ENST00000462321 CC2D1BQ5T0F9 858 aaKnown RBP27.1■■□□□ 1.93
PTPN18-207ENST00000462321 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
PTPN18-207ENST00000462321 ITSN1Q15811 1721 aa27.09■■□□□ 1.93
PTPN18-207ENST00000462321 PLEKHG3A1L390 1219 aa27.08■■□□□ 1.93
PTPN18-207ENST00000462321 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
PTPN18-207ENST00000462321 CGNL1Q0VF96 1302 aa27.08■■□□□ 1.93
PTPN18-207ENST00000462321 ZNF335Q9H4Z2 1342 aaPredicted RBP27.08■■□□□ 1.93
PTPN18-207ENST00000462321 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
PTPN18-207ENST00000462321 DCCP43146 1447 aa27.05■■□□□ 1.92
PTPN18-207ENST00000462321 NSD2O96028 1365 aa27.05■■□□□ 1.92
PTPN18-207ENST00000462321 MYBBP1AQ9BQG0 1328 aaKnown RBP27.05■■□□□ 1.92
PTPN18-207ENST00000462321 ZNF692Q9BU19 519 aaPredicted RBP27.03■■□□□ 1.92
PTPN18-207ENST00000462321 LRRC7Q96NW7 1537 aa27.03■■□□□ 1.92
PTPN18-207ENST00000462321 EDC4Q6P2E9 1401 aaKnown RBP27.03■■□□□ 1.92
PTPN18-207ENST00000462321 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
PTPN18-207ENST00000462321 MON2Q7Z3U7 1717 aa27.02■■□□□ 1.92
PTPN18-207ENST00000462321 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
PTPN18-207ENST00000462321 ACEP12821 1306 aa27.01■■□□□ 1.91
PTPN18-207ENST00000462321 RGPD8O14715 1765 aaPredicted RBP26.98■■□□□ 1.91
PTPN18-207ENST00000462321 MSH6P52701 1360 aa26.98■■□□□ 1.91
PTPN18-207ENST00000462321 USP6P35125 1406 aa26.97■■□□□ 1.91
PTPN18-207ENST00000462321 NLRP13Q86W25 1043 aa26.96■■□□□ 1.91
PTPN18-207ENST00000462321 ATF3P18847 181 aa26.96■■□□□ 1.91
PTPN18-207ENST00000462321 PMFBP1Q8TBY8 1022 aa26.96■■□□□ 1.91
PTPN18-207ENST00000462321 BRD4O60885 1362 aaPredicted RBP26.96■■□□□ 1.91
PTPN18-207ENST00000462321 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
PTPN18-207ENST00000462321 NRKQ7Z2Y5 1582 aa26.95■■□□□ 1.9
PTPN18-207ENST00000462321 NGDNQ8NEJ9 315 aaKnown RBP26.94■■□□□ 1.9
PTPN18-207ENST00000462321 MRS2Q9HD23 443 aa26.94■■□□□ 1.9
PTPN18-207ENST00000462321 C1orf167Q5SNV9 1468 aa26.94■■□□□ 1.9
PTPN18-207ENST00000462321 FYB1O15117 783 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 CCDC184Q52MB2 194 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 CADPS2Q86UW7 1296 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 PHF8Q9UPP1 1060 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 MST1RQ04912 1400 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 MORC1Q86VD1 984 aa26.93■■□□□ 1.9
PTPN18-207ENST00000462321 KIF20BQ96Q89 1820 aa26.92■■□□□ 1.9
PTPN18-207ENST00000462321 SSH2Q76I76 1423 aa26.92■■□□□ 1.9
PTPN18-207ENST00000462321 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
PTPN18-207ENST00000462321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms