RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 NAIPQ13075 1403 aa16.49■□□□□ 0.23
CBX3-205ENST00000462165 FNBP4Q8N3X1 1017 aaPredicted RBP16.49■□□□□ 0.23
CBX3-205ENST00000462165 USP21Q9UK80 565 aa16.49■□□□□ 0.23
CBX3-205ENST00000462165 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
CBX3-205ENST00000462165 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
CBX3-205ENST00000462165 TRPC5Q9UL62 973 aaPredicted RBP16.48■□□□□ 0.23
CBX3-205ENST00000462165 RPGRIP1LQ68CZ1 1315 aa16.47■□□□□ 0.23
CBX3-205ENST00000462165 ATRNO75882 1429 aa16.47■□□□□ 0.23
CBX3-205ENST00000462165 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
CBX3-205ENST00000462165 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
CBX3-205ENST00000462165 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
CBX3-205ENST00000462165 MYOM2P54296 1465 aa16.46■□□□□ 0.23
CBX3-205ENST00000462165 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CBX3-205ENST00000462165 NPHP3Q7Z494 1330 aa16.45■□□□□ 0.22
CBX3-205ENST00000462165 PXDNQ92626 1479 aa16.43■□□□□ 0.22
CBX3-205ENST00000462165 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
CBX3-205ENST00000462165 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
CBX3-205ENST00000462165 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.41■□□□□ 0.22
CBX3-205ENST00000462165 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
CBX3-205ENST00000462165 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
CBX3-205ENST00000462165 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
CBX3-205ENST00000462165 TECPR2O15040 1411 aa16.38■□□□□ 0.21
CBX3-205ENST00000462165 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
CBX3-205ENST00000462165 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
CBX3-205ENST00000462165 FOXO3O43524 673 aa16.37■□□□□ 0.21
CBX3-205ENST00000462165 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
CBX3-205ENST00000462165 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
CBX3-205ENST00000462165 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
CBX3-205ENST00000462165 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
CBX3-205ENST00000462165 FMN2Q9NZ56 1722 aa16.36■□□□□ 0.21
CBX3-205ENST00000462165 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
CBX3-205ENST00000462165 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
CBX3-205ENST00000462165 SLIT2O94813 1529 aa16.34■□□□□ 0.21
CBX3-205ENST00000462165 GLI3P10071 1580 aa16.34■□□□□ 0.21
CBX3-205ENST00000462165 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
CBX3-205ENST00000462165 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.2
CBX3-205ENST00000462165 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
CBX3-205ENST00000462165 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 STK26Q9P289 416 aa16.32■□□□□ 0.2
CBX3-205ENST00000462165 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
CBX3-205ENST00000462165 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
CBX3-205ENST00000462165 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
CBX3-205ENST00000462165 PIK3C2GO75747 1445 aa16.3■□□□□ 0.2
CBX3-205ENST00000462165 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
CBX3-205ENST00000462165 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
CBX3-205ENST00000462165 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
CBX3-205ENST00000462165 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
CBX3-205ENST00000462165 TMEM132EQ6IEE7 984 aa16.28■□□□□ 0.2
CBX3-205ENST00000462165 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
CBX3-205ENST00000462165 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
CBX3-205ENST00000462165 SIRT1Q96EB6 747 aa16.27■□□□□ 0.2
CBX3-205ENST00000462165 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.19
CBX3-205ENST00000462165 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
CBX3-205ENST00000462165 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
CBX3-205ENST00000462165 PSME1Q06323 249 aa16.23■□□□□ 0.19
CBX3-205ENST00000462165 VPS72Q15906 364 aa16.23■□□□□ 0.19
CBX3-205ENST00000462165 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
CBX3-205ENST00000462165 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
CBX3-205ENST00000462165 ONECUT3O60422 494 aaPredicted RBP16.22■□□□□ 0.19
CBX3-205ENST00000462165 SEPT12Q8IYM1 358 aa16.22■□□□□ 0.19
CBX3-205ENST00000462165 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
CBX3-205ENST00000462165 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
CBX3-205ENST00000462165 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
CBX3-205ENST00000462165 DEFB132Q7Z7B7 95 aa16.21■□□□□ 0.19
CBX3-205ENST00000462165 SF3B2Q13435 895 aaKnown RBP16.2■□□□□ 0.18
CBX3-205ENST00000462165 CABLES1Q8TDN4 633 aa16.2■□□□□ 0.18
CBX3-205ENST00000462165 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
CBX3-205ENST00000462165 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
CBX3-205ENST00000462165 LRP5O75197 1615 aa16.19■□□□□ 0.18
CBX3-205ENST00000462165 NRAPQ86VF7 1730 aa16.19■□□□□ 0.18
CBX3-205ENST00000462165 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
CBX3-205ENST00000462165 CFAP70Q5T0N1 1121 aa16.17■□□□□ 0.18
CBX3-205ENST00000462165 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
CBX3-205ENST00000462165 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
CBX3-205ENST00000462165 DLC1Q96QB1 1528 aa16.17■□□□□ 0.18
CBX3-205ENST00000462165 ANKARQ7Z5J8 1434 aa16.17■□□□□ 0.18
CBX3-205ENST00000462165 ADGRB2O60241 1585 aa16.17■□□□□ 0.18
CBX3-205ENST00000462165 ALS2Q96Q42 1657 aa16.16■□□□□ 0.18
CBX3-205ENST00000462165 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
CBX3-205ENST00000462165 FAM83GA6ND36 823 aa16.15■□□□□ 0.18
CBX3-205ENST00000462165 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
CBX3-205ENST00000462165 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
CBX3-205ENST00000462165 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
CBX3-205ENST00000462165 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBX3-205ENST00000462165 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
CBX3-205ENST00000462165 RGPD1P0DJD0 1748 aa16.13■□□□□ 0.17
CBX3-205ENST00000462165 ACIN1Q9UKV3 1341 aaKnown RBP16.13■□□□□ 0.17
CBX3-205ENST00000462165 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
CBX3-205ENST00000462165 BAG6P46379 1132 aa16.12■□□□□ 0.17
CBX3-205ENST00000462165 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
CBX3-205ENST00000462165 POGKQ9P215 609 aa16.11■□□□□ 0.17
CBX3-205ENST00000462165 A0A0G2JS52 829 aa16.1■□□□□ 0.17
CBX3-205ENST00000462165 MYT1Q01538 1121 aa16.1■□□□□ 0.17
CBX3-205ENST00000462165 FAM98CQ17RN3 349 aaKnown RBP16.1■□□□□ 0.17
CBX3-205ENST00000462165 BTG4Q9NY30 223 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms