RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 SAFB2Q14151 953 aaKnown RBP eCLIP29.54■■■□□ 2.32
SCAF8-204ENST00000461219 TRAK1Q9UPV9 953 aa29.54■■■□□ 2.32
SCAF8-204ENST00000461219 ADGRB1O14514 1584 aa29.53■■■□□ 2.32
SCAF8-204ENST00000461219 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
SCAF8-204ENST00000461219 PRAM1Q96QH2 718 aa29.52■■■□□ 2.32
SCAF8-204ENST00000461219 C1orf167Q5SNV9 1468 aa29.52■■■□□ 2.32
SCAF8-204ENST00000461219 COL16A1Q07092 1604 aaPredicted RBP29.52■■■□□ 2.32
SCAF8-204ENST00000461219 DLC1Q96QB1 1528 aa29.51■■■□□ 2.32
SCAF8-204ENST00000461219 PHF23Q9BUL5 403 aaPredicted RBP29.51■■■□□ 2.31
SCAF8-204ENST00000461219 NHSL1Q5SYE7 1610 aa29.5■■■□□ 2.31
SCAF8-204ENST00000461219 FMN2Q9NZ56 1722 aa29.48■■■□□ 2.31
SCAF8-204ENST00000461219 L3MBTL2Q969R5 705 aa29.48■■■□□ 2.31
SCAF8-204ENST00000461219 NUTM2FA1L443 756 aa29.47■■■□□ 2.31
SCAF8-204ENST00000461219 JCADQ9P266 1359 aa29.47■■■□□ 2.31
SCAF8-204ENST00000461219 ARHGEF28Q8N1W1 1705 aaKnown RBP29.45■■■□□ 2.31
SCAF8-204ENST00000461219 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
SCAF8-204ENST00000461219 PCGF6Q9BYE7 350 aa29.44■■■□□ 2.3
SCAF8-204ENST00000461219 RGPD8O14715 1765 aaPredicted RBP29.44■■■□□ 2.3
SCAF8-204ENST00000461219 ORAI2Q96SN7 254 aa29.43■■■□□ 2.3
SCAF8-204ENST00000461219 TONSLQ96HA7 1378 aa29.41■■■□□ 2.3
SCAF8-204ENST00000461219 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
SCAF8-204ENST00000461219 DDX17Q92841 729 aaKnown RBP29.4■■■□□ 2.3
SCAF8-204ENST00000461219 MINK1Q8N4C8 1332 aaPredicted RBP29.39■■■□□ 2.3
SCAF8-204ENST00000461219 LRRC59Q96AG4 307 aaKnown RBP29.38■■■□□ 2.29
SCAF8-204ENST00000461219 HIRIP3Q9BW71 556 aaPredicted RBP29.37■■■□□ 2.29
SCAF8-204ENST00000461219 KIF1AQ12756 1690 aa29.37■■■□□ 2.29
SCAF8-204ENST00000461219 ADGRB2O60241 1585 aa29.36■■■□□ 2.29
SCAF8-204ENST00000461219 TRPM1Q7Z4N2 1603 aa29.35■■■□□ 2.29
SCAF8-204ENST00000461219 NBPF1Q3BBV0 1214 aa29.35■■■□□ 2.29
SCAF8-204ENST00000461219 MEX3CQ5U5Q3 659 aaKnown RBP29.34■■■□□ 2.29
SCAF8-204ENST00000461219 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
SCAF8-204ENST00000461219 SPATA31A6Q5VVP1 1343 aa29.33■■■□□ 2.29
SCAF8-204ENST00000461219 EIF3AQ14152 1382 aaKnown RBP29.33■■■□□ 2.29
SCAF8-204ENST00000461219 NUTM2BA6NNL0 878 aaPredicted RBP29.3■■■□□ 2.28
SCAF8-204ENST00000461219 NUTM2EB1AL46 878 aaPredicted RBP29.3■■■□□ 2.28
SCAF8-204ENST00000461219 NUTM2AQ8IVF1 878 aaPredicted RBP29.3■■■□□ 2.28
SCAF8-204ENST00000461219 ROCK2O75116 1388 aaKnown RBP29.29■■■□□ 2.28
SCAF8-204ENST00000461219 FOXO3O43524 673 aa29.29■■■□□ 2.28
SCAF8-204ENST00000461219 PHF8Q9UPP1 1060 aa29.27■■■□□ 2.28
SCAF8-204ENST00000461219 SOS2Q07890 1332 aaPredicted RBP29.26■■■□□ 2.27
SCAF8-204ENST00000461219 ITSN1Q15811 1721 aa29.26■■■□□ 2.27
SCAF8-204ENST00000461219 QRICH2Q9H0J4 1663 aa29.26■■■□□ 2.27
SCAF8-204ENST00000461219 WASLO00401 505 aaPredicted RBP29.26■■■□□ 2.27
SCAF8-204ENST00000461219 XPCQ01831 940 aaPredicted RBP29.26■■■□□ 2.27
SCAF8-204ENST00000461219 ANKARQ7Z5J8 1434 aa29.26■■■□□ 2.27
SCAF8-204ENST00000461219 USP32Q8NFA0 1604 aa29.24■■■□□ 2.27
SCAF8-204ENST00000461219 TULP4Q9NRJ4 1543 aa29.24■■■□□ 2.27
SCAF8-204ENST00000461219 CENPJQ9HC77 1338 aaPredicted RBP29.23■■■□□ 2.27
SCAF8-204ENST00000461219 PNPLA6Q8IY17 1366 aa29.23■■■□□ 2.27
SCAF8-204ENST00000461219 PSME1Q06323 249 aa29.2■■■□□ 2.26
SCAF8-204ENST00000461219 ILDR2Q71H61 639 aa29.2■■■□□ 2.26
SCAF8-204ENST00000461219 PMFBP1Q8TBY8 1022 aa29.2■■■□□ 2.26
SCAF8-204ENST00000461219 PXDNQ92626 1479 aa29.2■■■□□ 2.26
SCAF8-204ENST00000461219 LRP6O75581 1613 aa29.2■■■□□ 2.26
SCAF8-204ENST00000461219 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
SCAF8-204ENST00000461219 NBPF8Q3BBV2 869 aa29.17■■■□□ 2.26
SCAF8-204ENST00000461219 CDK19Q9BWU1 502 aa29.17■■■□□ 2.26
SCAF8-204ENST00000461219 SRPK2P78362 688 aaKnown RBP29.14■■■□□ 2.26
SCAF8-204ENST00000461219 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
SCAF8-204ENST00000461219 CARD11Q9BXL7 1154 aa29.14■■■□□ 2.26
SCAF8-204ENST00000461219 COL22A1Q8NFW1 1626 aaPredicted RBP29.13■■■□□ 2.25
SCAF8-204ENST00000461219 LMOD2Q6P5Q4 547 aa29.13■■■□□ 2.25
SCAF8-204ENST00000461219 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
SCAF8-204ENST00000461219 NUDT16Q96DE0 195 aaKnown RBP29.13■■■□□ 2.25
SCAF8-204ENST00000461219 GPRASP1Q5JY77 1395 aa29.13■■■□□ 2.25
SCAF8-204ENST00000461219 PRR36Q9H6K5 1346 aa29.12■■■□□ 2.25
SCAF8-204ENST00000461219 CLSPNQ9HAW4 1339 aa29.12■■■□□ 2.25
SCAF8-204ENST00000461219 RALGAPBQ86X10 1494 aa29.1■■■□□ 2.25
SCAF8-204ENST00000461219 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
SCAF8-204ENST00000461219 ATP7BP35670 1465 aa29.1■■■□□ 2.25
SCAF8-204ENST00000461219 C8orf37Q96NL8 207 aa29.09■■■□□ 2.25
SCAF8-204ENST00000461219 HAP1P54257 671 aaPredicted RBP29.08■■■□□ 2.25
SCAF8-204ENST00000461219 SPATA31A3Q5VYP0 1347 aa29.08■■■□□ 2.25
SCAF8-204ENST00000461219 TNS3Q68CZ2 1445 aa29.07■■■□□ 2.24
SCAF8-204ENST00000461219 ZNF772Q68DY9 489 aaPredicted RBP29.07■■■□□ 2.24
SCAF8-204ENST00000461219 TOPAZ1Q8N9V7 1692 aa29.07■■■□□ 2.24
SCAF8-204ENST00000461219 RGS17Q9UGC6 210 aaPredicted RBP29.07■■■□□ 2.24
SCAF8-204ENST00000461219 MARF1Q9Y4F3 1742 aaKnown RBP29.07■■■□□ 2.24
SCAF8-204ENST00000461219 EVC2Q86UK5 1308 aa29.06■■■□□ 2.24
SCAF8-204ENST00000461219 PLEKHG5O94827 1062 aa29.06■■■□□ 2.24
SCAF8-204ENST00000461219 CCDC61Q9Y6R9 512 aa29.05■■■□□ 2.24
SCAF8-204ENST00000461219 SBNO1A3KN83 1393 aa29.04■■■□□ 2.24
SCAF8-204ENST00000461219 PAK3O75914 559 aaPredicted RBP29.04■■■□□ 2.24
SCAF8-204ENST00000461219 NGLY1Q96IV0 654 aa29.04■■■□□ 2.24
SCAF8-204ENST00000461219 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
SCAF8-204ENST00000461219 CABP2Q9NPB3 220 aa29.03■■■□□ 2.24
SCAF8-204ENST00000461219 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
SCAF8-204ENST00000461219 AFF2P51816 1311 aa29.02■■■□□ 2.24
SCAF8-204ENST00000461219 POTEAQ6S8J7 498 aa29■■■□□ 2.23
SCAF8-204ENST00000461219 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
SCAF8-204ENST00000461219 PPIP5K1Q6PFW1 1433 aa28.99■■■□□ 2.23
SCAF8-204ENST00000461219 ACEP12821 1306 aa28.96■■■□□ 2.23
SCAF8-204ENST00000461219 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
SCAF8-204ENST00000461219 SOCS7O14512 581 aa28.95■■■□□ 2.22
SCAF8-204ENST00000461219 ABCA3Q99758 1704 aa28.94■■■□□ 2.22
SCAF8-204ENST00000461219 PLEKHG3A1L390 1219 aa28.93■■■□□ 2.22
SCAF8-204ENST00000461219 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
SCAF8-204ENST00000461219 POLR3AO14802 1390 aaPredicted RBP28.91■■■□□ 2.22
SCAF8-204ENST00000461219 USP21Q9UK80 565 aa28.91■■■□□ 2.22
SCAF8-204ENST00000461219 CABP1Q9NZU7 370 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms