RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
APTX-209ENST00000460940 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
APTX-209ENST00000460940 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
APTX-209ENST00000460940 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
APTX-209ENST00000460940 TRAK1Q9UPV9 953 aa15.8■□□□□ 0.12
APTX-209ENST00000460940 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
APTX-209ENST00000460940 NBPF8Q3BBV2 869 aa15.8■□□□□ 0.12
APTX-209ENST00000460940 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
APTX-209ENST00000460940 PRAM1Q96QH2 718 aa15.8■□□□□ 0.12
APTX-209ENST00000460940 ILDR1Q86SU0 546 aaPredicted RBP15.79■□□□□ 0.12
APTX-209ENST00000460940 POGKQ9P215 609 aa15.79■□□□□ 0.12
APTX-209ENST00000460940 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
APTX-209ENST00000460940 MST1RQ04912 1400 aa15.78■□□□□ 0.12
APTX-209ENST00000460940 PIP4K2BP78356 416 aa15.78■□□□□ 0.12
APTX-209ENST00000460940 SLAIN2Q9P270 581 aa15.78■□□□□ 0.12
APTX-209ENST00000460940 EIF3AQ14152 1382 aaKnown RBP15.76■□□□□ 0.11
APTX-209ENST00000460940 ROBO1Q9Y6N7 1651 aa15.75■□□□□ 0.11
APTX-209ENST00000460940 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
APTX-209ENST00000460940 C1orf167Q5SNV9 1468 aa15.73■□□□□ 0.11
APTX-209ENST00000460940 SAFB2Q14151 953 aaKnown RBP eCLIP15.73■□□□□ 0.11
APTX-209ENST00000460940 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
APTX-209ENST00000460940 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
APTX-209ENST00000460940 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
APTX-209ENST00000460940 ANKARQ7Z5J8 1434 aa15.7■□□□□ 0.1
APTX-209ENST00000460940 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
APTX-209ENST00000460940 QRICH2Q9H0J4 1663 aa15.69■□□□□ 0.1
APTX-209ENST00000460940 AHDC1Q5TGY3 1603 aaPredicted RBP15.69■□□□□ 0.1
APTX-209ENST00000460940 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
APTX-209ENST00000460940 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
APTX-209ENST00000460940 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
APTX-209ENST00000460940 HSPA1LP34931 641 aa15.67■□□□□ 0.1
APTX-209ENST00000460940 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
APTX-209ENST00000460940 KIF1AQ12756 1690 aa15.66■□□□□ 0.1
APTX-209ENST00000460940 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
APTX-209ENST00000460940 USP32Q8NFA0 1604 aa15.64■□□□□ 0.09
APTX-209ENST00000460940 PHLPP1O60346 1717 aa15.64■□□□□ 0.09
APTX-209ENST00000460940 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
APTX-209ENST00000460940 ORAI2Q96SN7 254 aa15.63■□□□□ 0.09
APTX-209ENST00000460940 USP47Q96K76 1375 aa15.63■□□□□ 0.09
APTX-209ENST00000460940 ATP7BP35670 1465 aa15.63■□□□□ 0.09
APTX-209ENST00000460940 COL16A1Q07092 1604 aaPredicted RBP15.63■□□□□ 0.09
APTX-209ENST00000460940 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
APTX-209ENST00000460940 CDK19Q9BWU1 502 aa15.62■□□□□ 0.09
APTX-209ENST00000460940 EVC2Q86UK5 1308 aa15.62■□□□□ 0.09
APTX-209ENST00000460940 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
APTX-209ENST00000460940 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
APTX-209ENST00000460940 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
APTX-209ENST00000460940 PRR36Q9H6K5 1346 aa15.61■□□□□ 0.09
APTX-209ENST00000460940 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
APTX-209ENST00000460940 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
APTX-209ENST00000460940 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
APTX-209ENST00000460940 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
APTX-209ENST00000460940 RGPD8O14715 1765 aaPredicted RBP15.58■□□□□ 0.08
APTX-209ENST00000460940 SOS2Q07890 1332 aaPredicted RBP15.58■□□□□ 0.08
APTX-209ENST00000460940 PXDNQ92626 1479 aa15.58■□□□□ 0.08
APTX-209ENST00000460940 JCADQ9P266 1359 aa15.57■□□□□ 0.08
APTX-209ENST00000460940 ST20-MTHFSA0A0A6YYL1 179 aa15.57■□□□□ 0.08
APTX-209ENST00000460940 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
APTX-209ENST00000460940 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
APTX-209ENST00000460940 FOXO3O43524 673 aa15.56■□□□□ 0.08
APTX-209ENST00000460940 TESK2Q96S53 571 aa15.56■□□□□ 0.08
APTX-209ENST00000460940 LRRC59Q96AG4 307 aaKnown RBP15.55■□□□□ 0.08
APTX-209ENST00000460940 CABP2Q9NPB3 220 aa15.55■□□□□ 0.08
APTX-209ENST00000460940 SHPRHQ149N8 1683 aa15.55■□□□□ 0.08
APTX-209ENST00000460940 DDX17Q92841 729 aaKnown RBP15.54■□□□□ 0.08
APTX-209ENST00000460940 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
APTX-209ENST00000460940 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
APTX-209ENST00000460940 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
APTX-209ENST00000460940 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
APTX-209ENST00000460940 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
APTX-209ENST00000460940 EIF4G2P78344 907 aaKnown RBP eCLIP15.52■□□□□ 0.08
APTX-209ENST00000460940 PSME1Q06323 249 aa15.52■□□□□ 0.08
APTX-209ENST00000460940 SBNO1A3KN83 1393 aa15.52■□□□□ 0.08
APTX-209ENST00000460940 NGDNQ8NEJ9 315 aaKnown RBP15.52■□□□□ 0.07
APTX-209ENST00000460940 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
APTX-209ENST00000460940 TMF1P82094 1093 aa15.51■□□□□ 0.07
APTX-209ENST00000460940 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
APTX-209ENST00000460940 SPATA31A6Q5VVP1 1343 aa15.51■□□□□ 0.07
APTX-209ENST00000460940 TNS3Q68CZ2 1445 aa15.5■□□□□ 0.07
APTX-209ENST00000460940 NINLQ9Y2I6 1382 aa15.5■□□□□ 0.07
APTX-209ENST00000460940 XPCQ01831 940 aaPredicted RBP15.5■□□□□ 0.07
APTX-209ENST00000460940 CDCA8Q53HL2 280 aa15.5■□□□□ 0.07
APTX-209ENST00000460940 BRD4O60885 1362 aaPredicted RBP15.49■□□□□ 0.07
APTX-209ENST00000460940 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
APTX-209ENST00000460940 ACEP12821 1306 aa15.49■□□□□ 0.07
APTX-209ENST00000460940 SPATA31A3Q5VYP0 1347 aa15.49■□□□□ 0.07
APTX-209ENST00000460940 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
APTX-209ENST00000460940 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
APTX-209ENST00000460940 TRPM3Q9HCF6 1732 aaPredicted RBP15.49■□□□□ 0.07
APTX-209ENST00000460940 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
APTX-209ENST00000460940 CABP1Q9NZU7 370 aa15.48■□□□□ 0.07
APTX-209ENST00000460940 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
APTX-209ENST00000460940 USP6P35125 1406 aa15.45■□□□□ 0.06
APTX-209ENST00000460940 ALS2Q96Q42 1657 aa15.45■□□□□ 0.06
APTX-209ENST00000460940 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
APTX-209ENST00000460940 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
APTX-209ENST00000460940 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
APTX-209ENST00000460940 LRP6O75581 1613 aa15.43■□□□□ 0.06
APTX-209ENST00000460940 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
APTX-209ENST00000460940 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms