RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 ROBO2Q9HCK4 1378 aa17.9■□□□□ 0.46
PCYT1A-213ENST00000460827 MYOM2P54296 1465 aa17.89■□□□□ 0.45
PCYT1A-213ENST00000460827 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
PCYT1A-213ENST00000460827 BCL9LQ86UU0 1499 aa17.88■□□□□ 0.45
PCYT1A-213ENST00000460827 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
PCYT1A-213ENST00000460827 KIF1BO60333 1816 aa17.86■□□□□ 0.45
PCYT1A-213ENST00000460827 CCDC125Q86Z20 511 aa17.85■□□□□ 0.45
PCYT1A-213ENST00000460827 PXDNQ92626 1479 aa17.83■□□□□ 0.45
PCYT1A-213ENST00000460827 ITGAEP38570 1179 aa17.83■□□□□ 0.44
PCYT1A-213ENST00000460827 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
PCYT1A-213ENST00000460827 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
PCYT1A-213ENST00000460827 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
PCYT1A-213ENST00000460827 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
PCYT1A-213ENST00000460827 NPHP3Q7Z494 1330 aa17.8■□□□□ 0.44
PCYT1A-213ENST00000460827 CDC42BPGQ6DT37 1551 aa17.79■□□□□ 0.44
PCYT1A-213ENST00000460827 VGFO15240 615 aaPredicted RBP17.79■□□□□ 0.44
PCYT1A-213ENST00000460827 GLI3P10071 1580 aa17.79■□□□□ 0.44
PCYT1A-213ENST00000460827 BRWD3Q6RI45 1802 aa17.78■□□□□ 0.44
PCYT1A-213ENST00000460827 ESCO1Q5FWF5 840 aa17.78■□□□□ 0.44
PCYT1A-213ENST00000460827 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.44
PCYT1A-213ENST00000460827 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
PCYT1A-213ENST00000460827 PPLO60437 1756 aa17.76■□□□□ 0.43
PCYT1A-213ENST00000460827 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
PCYT1A-213ENST00000460827 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
PCYT1A-213ENST00000460827 FOXO3O43524 673 aa17.76■□□□□ 0.43
PCYT1A-213ENST00000460827 SLIT2O94813 1529 aa17.75■□□□□ 0.43
PCYT1A-213ENST00000460827 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
PCYT1A-213ENST00000460827 UNC5CLQ8IV45 518 aa17.74■□□□□ 0.43
PCYT1A-213ENST00000460827 RPGRIP1LQ68CZ1 1315 aa17.73■□□□□ 0.43
PCYT1A-213ENST00000460827 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
PCYT1A-213ENST00000460827 NAIPQ13075 1403 aa17.72■□□□□ 0.43
PCYT1A-213ENST00000460827 LRP5O75197 1615 aa17.71■□□□□ 0.43
PCYT1A-213ENST00000460827 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
PCYT1A-213ENST00000460827 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
PCYT1A-213ENST00000460827 SPATA31A3Q5VYP0 1347 aa17.69■□□□□ 0.42
PCYT1A-213ENST00000460827 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
PCYT1A-213ENST00000460827 TECPR2O15040 1411 aa17.68■□□□□ 0.42
PCYT1A-213ENST00000460827 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
PCYT1A-213ENST00000460827 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
PCYT1A-213ENST00000460827 SEPT12Q8IYM1 358 aa17.66■□□□□ 0.42
PCYT1A-213ENST00000460827 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
PCYT1A-213ENST00000460827 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
PCYT1A-213ENST00000460827 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
PCYT1A-213ENST00000460827 PLEKHH1Q9ULM0 1364 aa17.65■□□□□ 0.42
PCYT1A-213ENST00000460827 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.42
PCYT1A-213ENST00000460827 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.42
PCYT1A-213ENST00000460827 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 VPS72Q15906 364 aa17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 STK26Q9P289 416 aa17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.41
PCYT1A-213ENST00000460827 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
PCYT1A-213ENST00000460827 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
PCYT1A-213ENST00000460827 ABCC11Q96J66 1382 aa17.63■□□□□ 0.41
PCYT1A-213ENST00000460827 KRT28Q7Z3Y7 464 aa17.62■□□□□ 0.41
PCYT1A-213ENST00000460827 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
PCYT1A-213ENST00000460827 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
PCYT1A-213ENST00000460827 KRT27Q7Z3Y8 459 aa17.61■□□□□ 0.41
PCYT1A-213ENST00000460827 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
PCYT1A-213ENST00000460827 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
PCYT1A-213ENST00000460827 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
PCYT1A-213ENST00000460827 PSDA5PKW4 1024 aaPredicted RBP17.59■□□□□ 0.41
PCYT1A-213ENST00000460827 HRCP23327 699 aa17.59■□□□□ 0.41
PCYT1A-213ENST00000460827 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
PCYT1A-213ENST00000460827 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
PCYT1A-213ENST00000460827 SPATA31E1Q6ZUB1 1445 aa17.57■□□□□ 0.4
PCYT1A-213ENST00000460827 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
PCYT1A-213ENST00000460827 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
PCYT1A-213ENST00000460827 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 ANKRD30BQ9BXX2 1392 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 BAG6P46379 1132 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
PCYT1A-213ENST00000460827 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
PCYT1A-213ENST00000460827 PSME1Q06323 249 aa17.54■□□□□ 0.4
PCYT1A-213ENST00000460827 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
PCYT1A-213ENST00000460827 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
PCYT1A-213ENST00000460827 NRXN1Q9ULB1 1477 aa17.54■□□□□ 0.4
PCYT1A-213ENST00000460827 SIRT1Q96EB6 747 aa17.53■□□□□ 0.4
PCYT1A-213ENST00000460827 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
PCYT1A-213ENST00000460827 FAM98CQ17RN3 349 aaKnown RBP17.52■□□□□ 0.4
PCYT1A-213ENST00000460827 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.39
PCYT1A-213ENST00000460827 A0A0G2JS52 829 aa17.5■□□□□ 0.39
PCYT1A-213ENST00000460827 MYT1Q01538 1121 aa17.5■□□□□ 0.39
PCYT1A-213ENST00000460827 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
PCYT1A-213ENST00000460827 LMOD2Q6P5Q4 547 aa17.5■□□□□ 0.39
PCYT1A-213ENST00000460827 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
PCYT1A-213ENST00000460827 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
PCYT1A-213ENST00000460827 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
PCYT1A-213ENST00000460827 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
PCYT1A-213ENST00000460827 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
PCYT1A-213ENST00000460827 R3HDM1Q15032 1099 aaKnown RBP17.47■□□□□ 0.39
PCYT1A-213ENST00000460827 C14orf93Q9H972 538 aaKnown RBP17.47■□□□□ 0.39
PCYT1A-213ENST00000460827 ALS2Q96Q42 1657 aa17.47■□□□□ 0.39
PCYT1A-213ENST00000460827 COL14A1Q05707 1796 aaKnown RBP17.47■□□□□ 0.39
PCYT1A-213ENST00000460827 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms