RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	CDC42BPG	Q6DT37	1551 aa		13.8	□□□□□ -0.2
PSMD2-209	ENST00000460628	PLEKHH1	Q9ULM0	1364 aa		13.8	□□□□□ -0.2
PSMD2-209	ENST00000460628	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.8	□□□□□ -0.2
PSMD2-209	ENST00000460628	MYOM2	P54296	1465 aa		13.8	□□□□□ -0.2
PSMD2-209	ENST00000460628	NRXN1	Q9ULB1	1477 aa		13.8	□□□□□ -0.2
PSMD2-209	ENST00000460628	WAPL	Q7Z5K2	1190 aa		13.79	□□□□□ -0.2
PSMD2-209	ENST00000460628	SOS2	Q07890	1332 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMD2-209	ENST00000460628	C14orf93	Q9H972	538 aa	Known RBP	13.78	□□□□□ -0.2
PSMD2-209	ENST00000460628	IFT172	Q9UG01	1749 aa		13.78	□□□□□ -0.2
PSMD2-209	ENST00000460628	LAMC1	P11047	1609 aa		13.76	□□□□□ -0.21
PSMD2-209	ENST00000460628	AFF2	P51816	1311 aa		13.76	□□□□□ -0.21
PSMD2-209	ENST00000460628	NPHP3	Q7Z494	1330 aa		13.76	□□□□□ -0.21
PSMD2-209	ENST00000460628	ESCO1	Q5FWF5	840 aa		13.76	□□□□□ -0.21
PSMD2-209	ENST00000460628	CFAP70	Q5T0N1	1121 aa		13.76	□□□□□ -0.21
PSMD2-209	ENST00000460628	NUTM2F	A1L443	756 aa		13.75	□□□□□ -0.21
PSMD2-209	ENST00000460628	C8orf37	Q96NL8	207 aa		13.75	□□□□□ -0.21
PSMD2-209	ENST00000460628	ADAMTS2	O95450	1211 aa		13.74	□□□□□ -0.21
PSMD2-209	ENST00000460628	KNDC1	Q76NI1	1749 aa		13.73	□□□□□ -0.21
PSMD2-209	ENST00000460628	DHX57	Q6P158	1386 aa	Known RBP	13.73	□□□□□ -0.21
PSMD2-209	ENST00000460628	HRC	P23327	699 aa		13.73	□□□□□ -0.21
PSMD2-209	ENST00000460628	SIRT1	Q96EB6	747 aa		13.73	□□□□□ -0.21
PSMD2-209	ENST00000460628	PXDN	Q92626	1479 aa		13.73	□□□□□ -0.21
PSMD2-209	ENST00000460628	FOXO3	O43524	673 aa		13.72	□□□□□ -0.21
PSMD2-209	ENST00000460628	RXRB	P28702	533 aa		13.72	□□□□□ -0.21
PSMD2-209	ENST00000460628	XPC	Q01831	940 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD2-209	ENST00000460628	PRAM1	Q96QH2	718 aa		13.71	□□□□□ -0.21
PSMD2-209	ENST00000460628	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PSMD2-209	ENST00000460628	ADGRB1	O14514	1584 aa		13.7	□□□□□ -0.22
PSMD2-209	ENST00000460628	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD2-209	ENST00000460628	NGLY1	Q96IV0	654 aa		13.69	□□□□□ -0.22
PSMD2-209	ENST00000460628	DLC1	Q96QB1	1528 aa		13.69	□□□□□ -0.22
PSMD2-209	ENST00000460628	DCAF11	Q8TEB1	546 aa		13.68	□□□□□ -0.22
PSMD2-209	ENST00000460628	RGS12	O14924	1447 aa		13.67	□□□□□ -0.22
PSMD2-209	ENST00000460628	POGK	Q9P215	609 aa		13.67	□□□□□ -0.22
PSMD2-209	ENST00000460628	KDM2A	Q9Y2K7	1162 aa		13.67	□□□□□ -0.22
PSMD2-209	ENST00000460628	FMN2	Q9NZ56	1722 aa		13.67	□□□□□ -0.22
PSMD2-209	ENST00000460628	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	RBM6	P78332	1123 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	STAC3	Q96MF2	364 aa		13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	QTRT2	Q9H974	415 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	PHF8	Q9UPP1	1060 aa		13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	TRAK1	Q9UPV9	953 aa		13.66	□□□□□ -0.22
PSMD2-209	ENST00000460628	SPATA31A3	Q5VYP0	1347 aa		13.65	□□□□□ -0.22
PSMD2-209	ENST00000460628	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD2-209	ENST00000460628	USP21	Q9UK80	565 aa		13.65	□□□□□ -0.22
PSMD2-209	ENST00000460628	ANKAR	Q7Z5J8	1434 aa		13.64	□□□□□ -0.23
PSMD2-209	ENST00000460628	KIF1A	Q12756	1690 aa		13.64	□□□□□ -0.23
PSMD2-209	ENST00000460628	KRT28	Q7Z3Y7	464 aa		13.64	□□□□□ -0.23
PSMD2-209	ENST00000460628	TNS3	Q68CZ2	1445 aa		13.64	□□□□□ -0.23
PSMD2-209	ENST00000460628	ADGRB2	O60241	1585 aa		13.63	□□□□□ -0.23
PSMD2-209	ENST00000460628	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PSMD2-209	ENST00000460628	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD2-209	ENST00000460628	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD2-209	ENST00000460628	ATRN	O75882	1429 aa		13.62	□□□□□ -0.23
PSMD2-209	ENST00000460628	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD2-209	ENST00000460628	EIF3A	Q14152	1382 aa	Known RBP	13.61	□□□□□ -0.23
PSMD2-209	ENST00000460628	BCL9L	Q86UU0	1499 aa		13.61	□□□□□ -0.23
PSMD2-209	ENST00000460628	SBNO1	A3KN83	1393 aa		13.6	□□□□□ -0.23
PSMD2-209	ENST00000460628	PSME1	Q06323	249 aa		13.6	□□□□□ -0.23
PSMD2-209	ENST00000460628	PRR36	Q9H6K5	1346 aa		13.6	□□□□□ -0.23
PSMD2-209	ENST00000460628	PMFBP1	Q8TBY8	1022 aa		13.59	□□□□□ -0.23
PSMD2-209	ENST00000460628	TULP4	Q9NRJ4	1543 aa		13.59	□□□□□ -0.23
PSMD2-209	ENST00000460628	ARHGEF10	O15013	1369 aa		13.58	□□□□□ -0.23
PSMD2-209	ENST00000460628	WASL	O00401	505 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-209	ENST00000460628	HAP1	P54257	671 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-209	ENST00000460628	LMOD2	Q6P5Q4	547 aa		13.58	□□□□□ -0.24
PSMD2-209	ENST00000460628	USP32	Q8NFA0	1604 aa		13.57	□□□□□ -0.24
PSMD2-209	ENST00000460628	PLEKHG5	O94827	1062 aa		13.57	□□□□□ -0.24
PSMD2-209	ENST00000460628	CABLES1	Q8TDN4	633 aa		13.57	□□□□□ -0.24
PSMD2-209	ENST00000460628	SLIT2	O94813	1529 aa		13.57	□□□□□ -0.24
PSMD2-209	ENST00000460628	GPRASP1	Q5JY77	1395 aa		13.56	□□□□□ -0.24
PSMD2-209	ENST00000460628	UNC5CL	Q8IV45	518 aa		13.55	□□□□□ -0.24
PSMD2-209	ENST00000460628	ATAD2	Q6PL18	1390 aa		13.55	□□□□□ -0.24
PSMD2-209	ENST00000460628	ATP7B	P35670	1465 aa		13.55	□□□□□ -0.24
PSMD2-209	ENST00000460628	GJD4	Q96KN9	370 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD2-209	ENST00000460628	NBPF1	Q3BBV0	1214 aa		13.53	□□□□□ -0.24
PSMD2-209	ENST00000460628	NGDN	Q8NEJ9	315 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-209	ENST00000460628	RALGAPB	Q86X10	1494 aa		13.53	□□□□□ -0.24
PSMD2-209	ENST00000460628	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-209	ENST00000460628	NUDT16	Q96DE0	195 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-209	ENST00000460628	CDK19	Q9BWU1	502 aa		13.5	□□□□□ -0.25
PSMD2-209	ENST00000460628	PAK3	O75914	559 aa	Predicted RBP	13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	VPS72	Q15906	364 aa		13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	L3MBTL2	Q969R5	705 aa		13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	RGPD8	O14715	1765 aa	Predicted RBP	13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	GLI3	P10071	1580 aa		13.49	□□□□□ -0.25
PSMD2-209	ENST00000460628	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-209	ENST00000460628	MARF1	Q9Y4F3	1742 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-209	ENST00000460628	FAM83G	A6ND36	823 aa		13.48	□□□□□ -0.25
PSMD2-209	ENST00000460628	EP400	Q96L91	3159 aa		13.48	□□□□□ -0.25
PSMD2-209	ENST00000460628	ABCA3	Q99758	1704 aa		13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	KIAA1210	Q9ULL0	1709 aa		13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	SIN3A	Q96ST3	1273 aa		13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	CCDC9	Q9Y3X0	531 aa	Known RBP	13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	CCDC61	Q9Y6R9	512 aa		13.47	□□□□□ -0.25
PSMD2-209	ENST00000460628	POLR3A	O14802	1390 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD2-209	ENST00000460628	ALS2	Q96Q42	1657 aa		13.46	□□□□□ -0.26
PSMD2-209	ENST00000460628	ACE	P12821	1306 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms