RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
YIPF3-205ENST00000460547 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
YIPF3-205ENST00000460547 RBM33Q96EV2 1170 aaKnown RBP22.97■■□□□ 1.27
YIPF3-205ENST00000460547 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
YIPF3-205ENST00000460547 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
YIPF3-205ENST00000460547 DIP2AQ14689 1571 aa22.96■■□□□ 1.27
YIPF3-205ENST00000460547 FAM9BQ8IZU0 186 aa22.96■■□□□ 1.27
YIPF3-205ENST00000460547 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
YIPF3-205ENST00000460547 ADGRB1O14514 1584 aa22.95■■□□□ 1.27
YIPF3-205ENST00000460547 NKTRP30414 1462 aaKnown RBP22.94■■□□□ 1.26
YIPF3-205ENST00000460547 MYOM1P52179 1685 aa22.93■■□□□ 1.26
YIPF3-205ENST00000460547 NWD1Q149M9 1564 aa22.92■■□□□ 1.26
YIPF3-205ENST00000460547 C14orf37Q86TY3 774 aa22.91■■□□□ 1.26
YIPF3-205ENST00000460547 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
YIPF3-205ENST00000460547 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
YIPF3-205ENST00000460547 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
YIPF3-205ENST00000460547 PANK3Q9H999 370 aa22.9■■□□□ 1.26
YIPF3-205ENST00000460547 CHD2O14647 1828 aaKnown RBP22.9■■□□□ 1.26
YIPF3-205ENST00000460547 NLRP13Q86W25 1043 aa22.9■■□□□ 1.26
YIPF3-205ENST00000460547 METP08581 1390 aa22.89■■□□□ 1.25
YIPF3-205ENST00000460547 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
YIPF3-205ENST00000460547 MSH6P52701 1360 aa22.88■■□□□ 1.25
YIPF3-205ENST00000460547 PTPRUQ92729 1446 aa22.87■■□□□ 1.25
YIPF3-205ENST00000460547 NRXN3Q9Y4C0 1643 aa22.87■■□□□ 1.25
YIPF3-205ENST00000460547 NCOA3Q9Y6Q9 1424 aa22.85■■□□□ 1.25
YIPF3-205ENST00000460547 NPC1L1Q9UHC9 1359 aa22.85■■□□□ 1.25
YIPF3-205ENST00000460547 NEFLP07196 543 aa22.84■■□□□ 1.25
YIPF3-205ENST00000460547 INSRP06213 1382 aa22.83■■□□□ 1.25
YIPF3-205ENST00000460547 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.24
YIPF3-205ENST00000460547 C19orf44Q9H6X5 657 aa22.83■■□□□ 1.24
YIPF3-205ENST00000460547 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
YIPF3-205ENST00000460547 HSPA1LP34931 641 aa22.82■■□□□ 1.24
YIPF3-205ENST00000460547 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
YIPF3-205ENST00000460547 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
YIPF3-205ENST00000460547 QRICH2Q9H0J4 1663 aa22.81■■□□□ 1.24
YIPF3-205ENST00000460547 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
YIPF3-205ENST00000460547 ATF3P18847 181 aa22.8■■□□□ 1.24
YIPF3-205ENST00000460547 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
YIPF3-205ENST00000460547 SLAIN2Q9P270 581 aa22.79■■□□□ 1.24
YIPF3-205ENST00000460547 FKBP8Q14318 412 aa22.78■■□□□ 1.24
YIPF3-205ENST00000460547 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.24
YIPF3-205ENST00000460547 AMER1Q5JTC6 1135 aaPredicted RBP22.77■■□□□ 1.24
YIPF3-205ENST00000460547 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.24
YIPF3-205ENST00000460547 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
YIPF3-205ENST00000460547 CC2D1BQ5T0F9 858 aaKnown RBP22.75■■□□□ 1.23
YIPF3-205ENST00000460547 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
YIPF3-205ENST00000460547 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
YIPF3-205ENST00000460547 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
YIPF3-205ENST00000460547 STK26Q9P289 416 aa22.74■■□□□ 1.23
YIPF3-205ENST00000460547 PUS7Q96PZ0 661 aaKnown RBP22.72■■□□□ 1.23
YIPF3-205ENST00000460547 TRAK1Q9UPV9 953 aa22.71■■□□□ 1.23
YIPF3-205ENST00000460547 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
YIPF3-205ENST00000460547 ROBO2Q9HCK4 1378 aa22.7■■□□□ 1.22
YIPF3-205ENST00000460547 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
YIPF3-205ENST00000460547 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
YIPF3-205ENST00000460547 SETD1AO15047 1707 aaKnown RBP22.69■■□□□ 1.22
YIPF3-205ENST00000460547 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
YIPF3-205ENST00000460547 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
YIPF3-205ENST00000460547 DCCP43146 1447 aa22.67■■□□□ 1.22
YIPF3-205ENST00000460547 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
YIPF3-205ENST00000460547 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
YIPF3-205ENST00000460547 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
YIPF3-205ENST00000460547 ABCC11Q96J66 1382 aa22.66■■□□□ 1.22
YIPF3-205ENST00000460547 PPP2R1AP30153 589 aa22.65■■□□□ 1.22
YIPF3-205ENST00000460547 NUDCQ9Y266 331 aa22.65■■□□□ 1.22
YIPF3-205ENST00000460547 YTHDC2Q9H6S0 1430 aaKnown RBP22.64■■□□□ 1.21
YIPF3-205ENST00000460547 WAPLQ7Z5K2 1190 aa22.64■■□□□ 1.21
YIPF3-205ENST00000460547 ROBO1Q9Y6N7 1651 aa22.63■■□□□ 1.21
YIPF3-205ENST00000460547 EVC2Q86UK5 1308 aa22.61■■□□□ 1.21
YIPF3-205ENST00000460547 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
YIPF3-205ENST00000460547 CARD14Q9BXL6 1004 aa22.61■■□□□ 1.21
YIPF3-205ENST00000460547 TECPR2O15040 1411 aa22.6■■□□□ 1.21
YIPF3-205ENST00000460547 DLC1Q96QB1 1528 aa22.59■■□□□ 1.21
YIPF3-205ENST00000460547 BRINP3Q76B58 766 aa22.59■■□□□ 1.21
YIPF3-205ENST00000460547 NINLQ9Y2I6 1382 aa22.59■■□□□ 1.21
YIPF3-205ENST00000460547 MST1RQ04912 1400 aa22.58■■□□□ 1.2
YIPF3-205ENST00000460547 PDE3BQ13370 1112 aa22.57■■□□□ 1.2
YIPF3-205ENST00000460547 POGKQ9P215 609 aa22.57■■□□□ 1.2
YIPF3-205ENST00000460547 NSD3Q9BZ95 1437 aa22.56■■□□□ 1.2
YIPF3-205ENST00000460547 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
YIPF3-205ENST00000460547 PLEKHH1Q9ULM0 1364 aa22.55■■□□□ 1.2
YIPF3-205ENST00000460547 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
YIPF3-205ENST00000460547 ANKRD36BQ8N2N9 1353 aa22.54■■□□□ 1.2
YIPF3-205ENST00000460547 NALCNQ8IZF0 1738 aa22.54■■□□□ 1.2
YIPF3-205ENST00000460547 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
YIPF3-205ENST00000460547 NSD2O96028 1365 aa22.52■■□□□ 1.2
YIPF3-205ENST00000460547 C1orf167Q5SNV9 1468 aa22.52■■□□□ 1.2
YIPF3-205ENST00000460547 ATAD2Q6PL18 1390 aa22.51■■□□□ 1.19
YIPF3-205ENST00000460547 ORAI2Q96SN7 254 aa22.51■■□□□ 1.19
YIPF3-205ENST00000460547 SLC12A5Q9H2X9 1139 aa22.51■■□□□ 1.19
YIPF3-205ENST00000460547 KNDC1Q76NI1 1749 aa22.5■■□□□ 1.19
YIPF3-205ENST00000460547 NUTM2FA1L443 756 aa22.5■■□□□ 1.19
YIPF3-205ENST00000460547 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
YIPF3-205ENST00000460547 ESCO1Q5FWF5 840 aa22.49■■□□□ 1.19
YIPF3-205ENST00000460547 PHLPP1O60346 1717 aa22.48■■□□□ 1.19
YIPF3-205ENST00000460547 POLR3AO14802 1390 aaPredicted RBP22.48■■□□□ 1.19
YIPF3-205ENST00000460547 JCADQ9P266 1359 aa22.48■■□□□ 1.19
YIPF3-205ENST00000460547 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
YIPF3-205ENST00000460547 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
YIPF3-205ENST00000460547 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms