RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 THEMISQ8N1K5 641 aaPredicted RBP10.91□□□□□ -0.66
SFPQ-202ENST00000460428 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
SFPQ-202ENST00000460428 METP08581 1390 aa10.9□□□□□ -0.66
SFPQ-202ENST00000460428 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
SFPQ-202ENST00000460428 LTKP29376 864 aa10.9□□□□□ -0.66
SFPQ-202ENST00000460428 HNRNPUQ00839 825 aaKnown RBP eCLIP10.9□□□□□ -0.66
SFPQ-202ENST00000460428 PRAM1Q96QH2 718 aa10.9□□□□□ -0.66
SFPQ-202ENST00000460428 NSD2O96028 1365 aa10.9□□□□□ -0.67
SFPQ-202ENST00000460428 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
SFPQ-202ENST00000460428 FAM9BQ8IZU0 186 aa10.89□□□□□ -0.67
SFPQ-202ENST00000460428 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
SFPQ-202ENST00000460428 DIP2AQ14689 1571 aa10.89□□□□□ -0.67
SFPQ-202ENST00000460428 PPP2R1AP30153 589 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 TXNDC2Q86VQ3 553 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 POGKQ9P215 609 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 STK26Q9P289 416 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 CEP170BQ9Y4F5 1589 aaPredicted RBP10.88□□□□□ -0.67
SFPQ-202ENST00000460428 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
SFPQ-202ENST00000460428 ZNF142P52746 1687 aaPredicted RBP10.88□□□□□ -0.67
SFPQ-202ENST00000460428 RIMS1Q86UR5 1692 aaKnown RBP10.87□□□□□ -0.67
SFPQ-202ENST00000460428 PIK3R4Q99570 1358 aa10.87□□□□□ -0.67
SFPQ-202ENST00000460428 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
SFPQ-202ENST00000460428 CD163L1Q9NR16 1453 aa10.86□□□□□ -0.67
SFPQ-202ENST00000460428 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
SFPQ-202ENST00000460428 BLMP54132 1417 aaPredicted RBP10.85□□□□□ -0.67
SFPQ-202ENST00000460428 NSD3Q9BZ95 1437 aa10.85□□□□□ -0.67
SFPQ-202ENST00000460428 CDK19Q9BWU1 502 aa10.85□□□□□ -0.67
SFPQ-202ENST00000460428 CABP2Q9NPB3 220 aa10.85□□□□□ -0.67
SFPQ-202ENST00000460428 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
SFPQ-202ENST00000460428 ATP7BP35670 1465 aa10.85□□□□□ -0.67
SFPQ-202ENST00000460428 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
SFPQ-202ENST00000460428 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
SFPQ-202ENST00000460428 POLR3AO14802 1390 aaPredicted RBP10.84□□□□□ -0.67
SFPQ-202ENST00000460428 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
SFPQ-202ENST00000460428 PTPRUQ92729 1446 aa10.84□□□□□ -0.67
SFPQ-202ENST00000460428 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
SFPQ-202ENST00000460428 A0A1W2PP64 1363 aa10.83□□□□□ -0.68
SFPQ-202ENST00000460428 WAPLQ7Z5K2 1190 aa10.83□□□□□ -0.68
SFPQ-202ENST00000460428 TERF2IPQ9NYB0 399 aa10.83□□□□□ -0.68
SFPQ-202ENST00000460428 CPSF1Q10570 1443 aaKnown RBP10.83□□□□□ -0.68
SFPQ-202ENST00000460428 ROBO2Q9HCK4 1378 aa10.82□□□□□ -0.68
SFPQ-202ENST00000460428 SRPK2P78362 688 aaKnown RBP10.82□□□□□ -0.68
SFPQ-202ENST00000460428 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
SFPQ-202ENST00000460428 CNGB1Q14028 1251 aaPredicted RBP10.81□□□□□ -0.68
SFPQ-202ENST00000460428 SAFB2Q14151 953 aaKnown RBP eCLIP10.81□□□□□ -0.68
SFPQ-202ENST00000460428 PDE3BQ13370 1112 aa10.8□□□□□ -0.68
SFPQ-202ENST00000460428 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
SFPQ-202ENST00000460428 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.8□□□□□ -0.68
SFPQ-202ENST00000460428 ANKRD26Q9UPS8 1709 aa10.8□□□□□ -0.68
SFPQ-202ENST00000460428 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
SFPQ-202ENST00000460428 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
SFPQ-202ENST00000460428 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
SFPQ-202ENST00000460428 CABP1Q9NZU7 370 aa10.79□□□□□ -0.68
SFPQ-202ENST00000460428 CCDC61Q9Y6R9 512 aa10.79□□□□□ -0.68
SFPQ-202ENST00000460428 FYB1O15117 783 aa10.78□□□□□ -0.68
SFPQ-202ENST00000460428 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
SFPQ-202ENST00000460428 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
SFPQ-202ENST00000460428 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
SFPQ-202ENST00000460428 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
SFPQ-202ENST00000460428 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
SFPQ-202ENST00000460428 NUDT16Q96DE0 195 aaKnown RBP10.77□□□□□ -0.69
SFPQ-202ENST00000460428 BCANQ96GW7 911 aa10.77□□□□□ -0.69
SFPQ-202ENST00000460428 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
SFPQ-202ENST00000460428 ADAMTS8Q9UP79 889 aa10.77□□□□□ -0.69
SFPQ-202ENST00000460428 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
SFPQ-202ENST00000460428 PPIP5K1Q6PFW1 1433 aa10.76□□□□□ -0.69
SFPQ-202ENST00000460428 TOPAZ1Q8N9V7 1692 aa10.76□□□□□ -0.69
SFPQ-202ENST00000460428 AKAP12Q02952 1782 aa10.76□□□□□ -0.69
SFPQ-202ENST00000460428 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
SFPQ-202ENST00000460428 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
SFPQ-202ENST00000460428 NUDCQ9Y266 331 aa10.76□□□□□ -0.69
SFPQ-202ENST00000460428 CHD2O14647 1828 aaKnown RBP10.76□□□□□ -0.69
SFPQ-202ENST00000460428 MON2Q7Z3U7 1717 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 ERICH6BQ5W0A0 696 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 RNF123Q5XPI4 1314 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 PRR36Q9H6K5 1346 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 SHPRHQ149N8 1683 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 PNPLA6Q8IY17 1366 aa10.75□□□□□ -0.69
SFPQ-202ENST00000460428 KIF20BQ96Q89 1820 aa10.74□□□□□ -0.69
SFPQ-202ENST00000460428 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.691e-6■■■□□ 15.8
SFPQ-202ENST00000460428 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
SFPQ-202ENST00000460428 ANKARQ7Z5J8 1434 aa10.74□□□□□ -0.69
SFPQ-202ENST00000460428 MTHFSP49914 203 aa10.73□□□□□ -0.69
SFPQ-202ENST00000460428 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
SFPQ-202ENST00000460428 AATKQ6ZMQ8 1374 aa10.73□□□□□ -0.69
SFPQ-202ENST00000460428 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
SFPQ-202ENST00000460428 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
SFPQ-202ENST00000460428 COL3A1P02461 1466 aaPredicted RBP10.72□□□□□ -0.69
SFPQ-202ENST00000460428 NWD1Q149M9 1564 aa10.71□□□□□ -0.69
SFPQ-202ENST00000460428 ITSN1Q15811 1721 aa10.71□□□□□ -0.69
SFPQ-202ENST00000460428 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
SFPQ-202ENST00000460428 NRKQ7Z2Y5 1582 aa10.71□□□□□ -0.69
SFPQ-202ENST00000460428 CFAP53Q96M91 514 aa10.71□□□□□ -0.69
SFPQ-202ENST00000460428 KCNA6P17658 529 aa10.7□□□□□ -0.7
SFPQ-202ENST00000460428 GGNBP2Q9H3C7 697 aa10.7□□□□□ -0.7
SFPQ-202ENST00000460428 NEFLP07196 543 aa10.69□□□□□ -0.7
SFPQ-202ENST00000460428 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
SFPQ-202ENST00000460428 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
SFPQ-202ENST00000460428 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms