RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, human

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11A-208	ENST00000459908	RPRD2	Q5VT52	1461 aa	Known RBP	13.66	□□□□□ -0.22
ATP11A-208	ENST00000459908	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.66	□□□□□ -0.22
ATP11A-208	ENST00000459908	DIP2B	Q9P265	1576 aa		13.65	□□□□□ -0.22
ATP11A-208	ENST00000459908	CCDC7	Q96M83	1385 aa		13.65	□□□□□ -0.22
ATP11A-208	ENST00000459908	KDM5D	Q9BY66	1539 aa		13.65	□□□□□ -0.22
ATP11A-208	ENST00000459908	GTF2E1	P29083	439 aa	Predicted RBP	13.65	□□□□□ -0.22
ATP11A-208	ENST00000459908	STK31	Q9BXU1	1019 aa		13.65	□□□□□ -0.22
ATP11A-208	ENST00000459908	FRAT1	Q92837	279 aa	Predicted RBP	13.64	□□□□□ -0.23
ATP11A-208	ENST00000459908	ERICH6	Q7L0X2	663 aa		13.64	□□□□□ -0.23
ATP11A-208	ENST00000459908	SLAIN2	Q9P270	581 aa		13.64	□□□□□ -0.23
ATP11A-208	ENST00000459908	HMOX1	P09601	288 aa		13.64	□□□□□ -0.23
ATP11A-208	ENST00000459908	DDX54	Q8TDD1	881 aa	Known RBP	13.64	□□□□□ -0.23
ATP11A-208	ENST00000459908	MTHFS	P49914	203 aa		13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	NPHP4	O75161	1426 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	C8orf37	Q96NL8	207 aa		13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	TMX4	Q9H1E5	349 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	ACE	P12821	1306 aa		13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	MAST1	Q9Y2H9	1570 aa		13.63	□□□□□ -0.23
ATP11A-208	ENST00000459908	CFAP65	Q6ZU64	1925 aa	Known RBP	13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	NLRP1	Q9C000	1473 aa		13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	GLI2	P10070	1586 aa		13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	CCER2	I3L3R5	266 aa		13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	SCAF11	Q99590	1463 aa	Known RBP	13.62	□□□□□ -0.23
ATP11A-208	ENST00000459908	UGGT1	Q9NYU2	1555 aa		13.61	□□□□□ -0.23
ATP11A-208	ENST00000459908	RRP7A	Q9Y3A4	280 aa	Known RBP	13.61	□□□□□ -0.23
ATP11A-208	ENST00000459908	RRS1	Q15050	365 aa	Known RBP	13.6	□□□□□ -0.23
ATP11A-208	ENST00000459908	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP11A-208	ENST00000459908	NME9	Q86XW9	330 aa		13.6	□□□□□ -0.23
ATP11A-208	ENST00000459908	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.58	□□□□□ -0.23
ATP11A-208	ENST00000459908	TMEM94	Q12767	1356 aa		13.58	□□□□□ -0.23
ATP11A-208	ENST00000459908	MS4A1	P11836	297 aa		13.58	□□□□□ -0.24
ATP11A-208	ENST00000459908	PZP	P20742	1482 aa		13.58	□□□□□ -0.24
ATP11A-208	ENST00000459908	SPG7	Q9UQ90	795 aa		13.58	□□□□□ -0.24
ATP11A-208	ENST00000459908	ERVK-7	P63135	1459 aa		13.58	□□□□□ -0.24
ATP11A-208	ENST00000459908	CHRNA2	Q15822	529 aa		13.58	□□□□□ -0.24
ATP11A-208	ENST00000459908	EFCAB6	Q5THR3	1501 aa		13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	GOLGA2	Q08379	1002 aa		13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	KLHL34	Q8N239	644 aa		13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	CHMP4B	Q9H444	224 aa	Known RBP	13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	ORAI2	Q96SN7	254 aa		13.57	□□□□□ -0.24
ATP11A-208	ENST00000459908	WASHC2A	Q641Q2	1341 aa		13.56	□□□□□ -0.24
ATP11A-208	ENST00000459908	OS9	Q13438	667 aa	Predicted RBP	13.56	□□□□□ -0.24
ATP11A-208	ENST00000459908	SULT6B1	Q6IMI4	303 aa		13.56	□□□□□ -0.24
ATP11A-208	ENST00000459908	GAS2L2	Q8NHY3	880 aa		13.56	□□□□□ -0.24
ATP11A-208	ENST00000459908	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	RIPK4	P57078	832 aa		13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	CABLES1	Q8TDN4	633 aa		13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	PLEKHG1	Q9ULL1	1385 aa		13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	NSD3	Q9BZ95	1437 aa		13.55	□□□□□ -0.24
ATP11A-208	ENST00000459908	CDC42BPA	Q5VT25	1732 aa		13.54	□□□□□ -0.24
ATP11A-208	ENST00000459908	DCAF8L1	A6NGE4	600 aa		13.54	□□□□□ -0.24
ATP11A-208	ENST00000459908	NGEF	Q8N5V2	710 aa		13.54	□□□□□ -0.24
ATP11A-208	ENST00000459908	RBM42	Q9BTD8	480 aa	Known RBP	13.54	□□□□□ -0.24
ATP11A-208	ENST00000459908	IPO8	O15397	1037 aa	Known RBP	13.54	□□□□□ -0.24
ATP11A-208	ENST00000459908	ELL2	O00472	640 aa	Predicted RBP	13.53	□□□□□ -0.24
ATP11A-208	ENST00000459908	EIF2S2	P20042	333 aa	Known RBP	13.53	□□□□□ -0.24
ATP11A-208	ENST00000459908	EXOC5	O00471	708 aa		13.52	□□□□□ -0.24
ATP11A-208	ENST00000459908	ABCC3	O15438	1527 aa		13.52	□□□□□ -0.24
ATP11A-208	ENST00000459908	APAF1	O14727	1248 aa		13.52	□□□□□ -0.25
ATP11A-208	ENST00000459908	TTC21A	Q8NDW8	1320 aa		13.52	□□□□□ -0.25
ATP11A-208	ENST00000459908	HSP90AB1	P08238	724 aa	Known RBP	13.52	□□□□□ -0.25
ATP11A-208	ENST00000459908	PRAG1	Q86YV5	1406 aa		13.52	□□□□□ -0.25
ATP11A-208	ENST00000459908	PTPRM	P28827	1452 aa		13.52	□□□□□ -0.25
ATP11A-208	ENST00000459908	PRKAR2B	P31323	418 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	CABP4	P57796	275 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	KDM4F	A0A1W2PPD8	638 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	CCDC136	Q96JN2	1154 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	TTC21B	Q7Z4L5	1316 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	A2ML1	A8K2U0	1454 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	ARHGAP31	Q2M1Z3	1444 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	NINL	Q9Y2I6	1382 aa		13.51	□□□□□ -0.25
ATP11A-208	ENST00000459908	PPIP5K1	Q6PFW1	1433 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	HMGB2	P26583	209 aa	Known RBP	13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	PPP2R1A	P30153	589 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	FKBP8	Q14318	412 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	RUNDC1	Q96C34	613 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	CERK	Q8TCT0	537 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	TSPYL4	Q9UJ04	414 aa		13.5	□□□□□ -0.25
ATP11A-208	ENST00000459908	ADGB	Q8N7X0	1667 aa		13.49	□□□□□ -0.25
ATP11A-208	ENST00000459908	CHMP3	Q9Y3E7	222 aa		13.49	□□□□□ -0.25
ATP11A-208	ENST00000459908	ABCC11	Q96J66	1382 aa		13.49	□□□□□ -0.25
ATP11A-208	ENST00000459908	TAF7L	Q5H9L4	462 aa		13.49	□□□□□ -0.25
ATP11A-208	ENST00000459908	HDAC5	Q9UQL6	1122 aa		13.49	□□□□□ -0.25
ATP11A-208	ENST00000459908	TRPM2	O94759	1503 aa		13.48	□□□□□ -0.25
ATP11A-208	ENST00000459908	SLC4A10	Q6U841	1118 aa		13.48	□□□□□ -0.25
ATP11A-208	ENST00000459908	SMC4	Q9NTJ3	1288 aa		13.48	□□□□□ -0.25
ATP11A-208	ENST00000459908	DDX17	Q92841	729 aa	Known RBP	13.48	□□□□□ -0.25
ATP11A-208	ENST00000459908		G3V3G9	751 aa		13.47	□□□□□ -0.25
ATP11A-208	ENST00000459908	IRX6	P78412	446 aa	Predicted RBP	13.47	□□□□□ -0.25
ATP11A-208	ENST00000459908	DCAF8	Q5TAQ9	597 aa		13.47	□□□□□ -0.25
ATP11A-208	ENST00000459908	SIRT1	Q96EB6	747 aa		13.47	□□□□□ -0.25
ATP11A-208	ENST00000459908	ARHGEF40	Q8TER5	1519 aa		13.47	□□□□□ -0.25
ATP11A-208	ENST00000459908	ANKRD24	Q8TF21	1146 aa		13.46	□□□□□ -0.25
ATP11A-208	ENST00000459908	NECTIN2	Q92692	538 aa		13.46	□□□□□ -0.25
ATP11A-208	ENST00000459908	EMILIN1	Q9Y6C2	1016 aa		13.46	□□□□□ -0.25
ATP11A-208	ENST00000459908	GC	P02774	474 aa		13.46	□□□□□ -0.26
ATP11A-208	ENST00000459908	USHBP1	Q8N6Y0	703 aa		13.46	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms