RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 SIRT1Q96EB6 747 aa25.54■■□□□ 1.68
SCARNA2-201ENST00000458748 CDC42BPGQ6DT37 1551 aa25.53■■□□□ 1.68
SCARNA2-201ENST00000458748 MEX3CQ5U5Q3 659 aaKnown RBP25.53■■□□□ 1.68
SCARNA2-201ENST00000458748 DHX57Q6P158 1386 aaKnown RBP25.52■■□□□ 1.68
SCARNA2-201ENST00000458748 CFAP70Q5T0N1 1121 aa25.51■■□□□ 1.67
SCARNA2-201ENST00000458748 DDX17Q92841 729 aaKnown RBP25.5■■□□□ 1.67
SCARNA2-201ENST00000458748 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
SCARNA2-201ENST00000458748 DCAF11Q8TEB1 546 aa25.49■■□□□ 1.67
SCARNA2-201ENST00000458748 NUTM2BA6NNL0 878 aaPredicted RBP25.48■■□□□ 1.67
SCARNA2-201ENST00000458748 NUTM2EB1AL46 878 aaPredicted RBP25.48■■□□□ 1.67
SCARNA2-201ENST00000458748 NUTM2AQ8IVF1 878 aaPredicted RBP25.48■■□□□ 1.67
SCARNA2-201ENST00000458748 LRRC59Q96AG4 307 aaKnown RBP25.48■■□□□ 1.67
SCARNA2-201ENST00000458748 KDM2AQ9Y2K7 1162 aa25.46■■□□□ 1.67
SCARNA2-201ENST00000458748 ORAI2Q96SN7 254 aa25.44■■□□□ 1.66
SCARNA2-201ENST00000458748 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
SCARNA2-201ENST00000458748 DLC1Q96QB1 1528 aa25.43■■□□□ 1.66
SCARNA2-201ENST00000458748 ZNF772Q68DY9 489 aaPredicted RBP25.42■■□□□ 1.66
SCARNA2-201ENST00000458748 ADGRB1O14514 1584 aa25.42■■□□□ 1.66
SCARNA2-201ENST00000458748 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
SCARNA2-201ENST00000458748 FMN2Q9NZ56 1722 aa25.4■■□□□ 1.66
SCARNA2-201ENST00000458748 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
SCARNA2-201ENST00000458748 PNPLA6Q8IY17 1366 aa25.39■■□□□ 1.65
SCARNA2-201ENST00000458748 ESCO1Q5FWF5 840 aa25.38■■□□□ 1.65
SCARNA2-201ENST00000458748 PRAM1Q96QH2 718 aa25.37■■□□□ 1.65
SCARNA2-201ENST00000458748 NPHP3Q7Z494 1330 aa25.37■■□□□ 1.65
SCARNA2-201ENST00000458748 POGKQ9P215 609 aa25.35■■□□□ 1.65
SCARNA2-201ENST00000458748 AFF2P51816 1311 aa25.35■■□□□ 1.65
SCARNA2-201ENST00000458748 KIF1AQ12756 1690 aa25.33■■□□□ 1.65
SCARNA2-201ENST00000458748 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
SCARNA2-201ENST00000458748 C8orf37Q96NL8 207 aa25.32■■□□□ 1.64
SCARNA2-201ENST00000458748 TRAK1Q9UPV9 953 aa25.31■■□□□ 1.64
SCARNA2-201ENST00000458748 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
SCARNA2-201ENST00000458748 NUTM2FA1L443 756 aa25.3■■□□□ 1.64
SCARNA2-201ENST00000458748 PXDNQ92626 1479 aa25.29■■□□□ 1.64
SCARNA2-201ENST00000458748 FOXO3O43524 673 aa25.29■■□□□ 1.64
SCARNA2-201ENST00000458748 RXRBP28702 533 aa25.29■■□□□ 1.64
SCARNA2-201ENST00000458748 RGPD8O14715 1765 aaPredicted RBP25.28■■□□□ 1.64
SCARNA2-201ENST00000458748 COL22A1Q8NFW1 1626 aaPredicted RBP25.28■■□□□ 1.64
SCARNA2-201ENST00000458748 ADAMTS2O95450 1211 aa25.28■■□□□ 1.64
SCARNA2-201ENST00000458748 SAFB2Q14151 953 aaKnown RBP eCLIP25.28■■□□□ 1.64
SCARNA2-201ENST00000458748 ANKARQ7Z5J8 1434 aa25.25■■□□□ 1.63
SCARNA2-201ENST00000458748 ARHGEF28Q8N1W1 1705 aaKnown RBP25.25■■□□□ 1.63
SCARNA2-201ENST00000458748 EIF3AQ14152 1382 aaKnown RBP25.24■■□□□ 1.63
SCARNA2-201ENST00000458748 PHF8Q9UPP1 1060 aa25.23■■□□□ 1.63
SCARNA2-201ENST00000458748 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
SCARNA2-201ENST00000458748 NGLY1Q96IV0 654 aa25.22■■□□□ 1.63
SCARNA2-201ENST00000458748 NEUROD1Q13562 356 aa25.21■■□□□ 1.63
SCARNA2-201ENST00000458748 QTRT2Q9H974 415 aaKnown RBP25.21■■□□□ 1.63
SCARNA2-201ENST00000458748 USP32Q8NFA0 1604 aa25.2■■□□□ 1.62
SCARNA2-201ENST00000458748 SIN3AQ96ST3 1273 aa25.2■■□□□ 1.62
SCARNA2-201ENST00000458748 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
SCARNA2-201ENST00000458748 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
SCARNA2-201ENST00000458748 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
SCARNA2-201ENST00000458748 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
SCARNA2-201ENST00000458748 PSME1Q06323 249 aa25.18■■□□□ 1.62
SCARNA2-201ENST00000458748 KRT28Q7Z3Y7 464 aa25.18■■□□□ 1.62
SCARNA2-201ENST00000458748 UPF1Q92900 1129 aaKnown RBP eCLIP25.18■■□□□ 1.62not detected■■■□□ 15
SCARNA2-201ENST00000458748 HIRIP3Q9BW71 556 aaPredicted RBP25.18■■□□□ 1.62
SCARNA2-201ENST00000458748 TULP4Q9NRJ4 1543 aa25.17■■□□□ 1.62
SCARNA2-201ENST00000458748 SPATA31A3Q5VYP0 1347 aa25.17■■□□□ 1.62
SCARNA2-201ENST00000458748 RBM6P78332 1123 aaKnown RBP25.16■■□□□ 1.62
SCARNA2-201ENST00000458748 MARF1Q9Y4F3 1742 aaKnown RBP25.15■■□□□ 1.62
SCARNA2-201ENST00000458748 RGS12O14924 1447 aa25.14■■□□□ 1.62
SCARNA2-201ENST00000458748 NBPF1Q3BBV0 1214 aa25.14■■□□□ 1.62
SCARNA2-201ENST00000458748 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
SCARNA2-201ENST00000458748 USP21Q9UK80 565 aa25.13■■□□□ 1.61
SCARNA2-201ENST00000458748 ITSN1Q15811 1721 aa25.12■■□□□ 1.61
SCARNA2-201ENST00000458748 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
SCARNA2-201ENST00000458748 PRR36Q9H6K5 1346 aa25.11■■□□□ 1.61
SCARNA2-201ENST00000458748 PMFBP1Q8TBY8 1022 aa25.1■■□□□ 1.61
SCARNA2-201ENST00000458748 FNBP4Q8N3X1 1017 aaPredicted RBP25.09■■□□□ 1.61
SCARNA2-201ENST00000458748 ARHGEF10O15013 1369 aa25.08■■□□□ 1.61
SCARNA2-201ENST00000458748 TRPM1Q7Z4N2 1603 aa25.08■■□□□ 1.6
SCARNA2-201ENST00000458748 GPRASP1Q5JY77 1395 aa25.07■■□□□ 1.6
SCARNA2-201ENST00000458748 TONSLQ96HA7 1378 aa25.07■■□□□ 1.6
SCARNA2-201ENST00000458748 TRPC5Q9UL62 973 aaPredicted RBP25.07■■□□□ 1.6
SCARNA2-201ENST00000458748 TRPM3Q9HCF6 1732 aaPredicted RBP25.06■■□□□ 1.6
SCARNA2-201ENST00000458748 ATP7BP35670 1465 aa25.05■■□□□ 1.6
SCARNA2-201ENST00000458748 NUDT16Q96DE0 195 aaKnown RBP25.05■■□□□ 1.6
SCARNA2-201ENST00000458748 CDK19Q9BWU1 502 aa25.05■■□□□ 1.6
SCARNA2-201ENST00000458748 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
SCARNA2-201ENST00000458748 ROCK2O75116 1388 aaKnown RBP25.04■■□□□ 1.6
SCARNA2-201ENST00000458748 ATRNO75882 1429 aa25.03■■□□□ 1.6
SCARNA2-201ENST00000458748 NGDNQ8NEJ9 315 aaKnown RBP25.03■■□□□ 1.6
SCARNA2-201ENST00000458748 BCL9LQ86UU0 1499 aa25.01■■□□□ 1.59
SCARNA2-201ENST00000458748 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
SCARNA2-201ENST00000458748 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
SCARNA2-201ENST00000458748 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
SCARNA2-201ENST00000458748 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
SCARNA2-201ENST00000458748 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
SCARNA2-201ENST00000458748 ABCA3Q99758 1704 aa25■■□□□ 1.59
SCARNA2-201ENST00000458748 HAP1P54257 671 aaPredicted RBP24.99■■□□□ 1.59
SCARNA2-201ENST00000458748 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.98■■□□□ 1.59
SCARNA2-201ENST00000458748 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
SCARNA2-201ENST00000458748 POLR3AO14802 1390 aaPredicted RBP24.96■■□□□ 1.59
SCARNA2-201ENST00000458748 PLEKHG3A1L390 1219 aa24.96■■□□□ 1.59
SCARNA2-201ENST00000458748 CABLES1Q8TDN4 633 aa24.96■■□□□ 1.59
SCARNA2-201ENST00000458748 SLIT2O94813 1529 aa24.96■■□□□ 1.59
SCARNA2-201ENST00000458748 SRPK2P78362 688 aaKnown RBP24.95■■□□□ 1.58
SCARNA2-201ENST00000458748 ATAD2Q6PL18 1390 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms