RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 KIF14Q15058 1648 aa13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
AMBRA1-202ENST00000458649 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
AMBRA1-202ENST00000458649 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
AMBRA1-202ENST00000458649 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
AMBRA1-202ENST00000458649 MARCH6O60337 910 aa13.17□□□□□ -0.3
AMBRA1-202ENST00000458649 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
AMBRA1-202ENST00000458649 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
AMBRA1-202ENST00000458649 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-202ENST00000458649 APPP05067 770 aa13.17□□□□□ -0.3
AMBRA1-202ENST00000458649 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 GGNBP2Q9H3C7 697 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 RIPK4P57078 832 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-202ENST00000458649 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 GSE1Q14687 1217 aa13.15□□□□□ -0.3
AMBRA1-202ENST00000458649 MTHFSP49914 203 aa13.14□□□□□ -0.31
AMBRA1-202ENST00000458649 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
AMBRA1-202ENST00000458649 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
AMBRA1-202ENST00000458649 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■□□□□ 9.5
AMBRA1-202ENST00000458649 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 NUTM2GQ5VZR2 741 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 ERBINQ96RT1 1412 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-202ENST00000458649 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 TPM4P67936 248 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 PNISRQ8TF01 805 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 GOLGA6L1Q8N7Z2 621 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 SLC12A5Q9H2X9 1139 aa13.12□□□□□ -0.31
AMBRA1-202ENST00000458649 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 PDE4AP27815 886 aa13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 SYAP1Q96A49 352 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 DDX19BQ9UMR2 479 aa13.11□□□□□ -0.31
AMBRA1-202ENST00000458649 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
AMBRA1-202ENST00000458649 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
AMBRA1-202ENST00000458649 LRPPRCP42704 1394 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-202ENST00000458649 ST18O60284 1047 aa13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 RPRD2Q5VT52 1461 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 SLKQ9H2G2 1235 aaPredicted RBP13.09□□□□□ -0.31
AMBRA1-202ENST00000458649 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.31
AMBRA1-202ENST00000458649 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 TRDNQ13061 729 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
AMBRA1-202ENST00000458649 HMOX1P09601 288 aa13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 MAP7D2Q96T17 732 aa13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 NUP153P49790 1475 aaKnown RBP13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
AMBRA1-202ENST00000458649 ATP10BO94823 1461 aa13.06□□□□□ -0.32
AMBRA1-202ENST00000458649 CABP4P57796 275 aa13.06□□□□□ -0.32
AMBRA1-202ENST00000458649 ERC2O15083 957 aa13.06□□□□□ -0.32
AMBRA1-202ENST00000458649 AAMPQ13685 434 aa13.06□□□□□ -0.32
AMBRA1-202ENST00000458649 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-202ENST00000458649 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
AMBRA1-202ENST00000458649 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms