RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 EFCAB6Q5THR3 1501 aa18.27■□□□□ 0.51
SCFD1-203ENST00000458591 ASXL2Q76L83 1435 aa18.27■□□□□ 0.51
SCFD1-203ENST00000458591 USP19O94966 1318 aa18.27■□□□□ 0.51
SCFD1-203ENST00000458591 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
SCFD1-203ENST00000458591 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
SCFD1-203ENST00000458591 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
SCFD1-203ENST00000458591 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
SCFD1-203ENST00000458591 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
SCFD1-203ENST00000458591 CABP2Q9NPB3 220 aa18.25■□□□□ 0.51
SCFD1-203ENST00000458591 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
SCFD1-203ENST00000458591 KIF1BO60333 1816 aa18.24■□□□□ 0.51
SCFD1-203ENST00000458591 NPATQ14207 1427 aa18.24■□□□□ 0.51
SCFD1-203ENST00000458591 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
SCFD1-203ENST00000458591 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
SCFD1-203ENST00000458591 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
SCFD1-203ENST00000458591 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
SCFD1-203ENST00000458591 IFT172Q9UG01 1749 aa18.21■□□□□ 0.51
SCFD1-203ENST00000458591 GSE1Q14687 1217 aa18.21■□□□□ 0.51
SCFD1-203ENST00000458591 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
SCFD1-203ENST00000458591 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
SCFD1-203ENST00000458591 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
SCFD1-203ENST00000458591 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.58e-6■■□□□ 11.7
SCFD1-203ENST00000458591 STK26Q9P289 416 aa18.2■□□□□ 0.5
SCFD1-203ENST00000458591 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
SCFD1-203ENST00000458591 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
SCFD1-203ENST00000458591 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
SCFD1-203ENST00000458591 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
SCFD1-203ENST00000458591 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
SCFD1-203ENST00000458591 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
SCFD1-203ENST00000458591 RAPGEF3O95398 923 aa18.18■□□□□ 0.5
SCFD1-203ENST00000458591 IQSEC2Q5JU85 1478 aa18.17■□□□□ 0.5
SCFD1-203ENST00000458591 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
SCFD1-203ENST00000458591 MYO3AQ8NEV4 1616 aa18.17■□□□□ 0.5
SCFD1-203ENST00000458591 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
SCFD1-203ENST00000458591 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
SCFD1-203ENST00000458591 QRICH2Q9H0J4 1663 aa18.16■□□□□ 0.5
SCFD1-203ENST00000458591 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
SCFD1-203ENST00000458591 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
SCFD1-203ENST00000458591 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
SCFD1-203ENST00000458591 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
SCFD1-203ENST00000458591 FRMPD1Q5SYB0 1578 aa18.14■□□□□ 0.49
SCFD1-203ENST00000458591 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
SCFD1-203ENST00000458591 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
SCFD1-203ENST00000458591 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
SCFD1-203ENST00000458591 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
SCFD1-203ENST00000458591 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
SCFD1-203ENST00000458591 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
SCFD1-203ENST00000458591 CD109Q6YHK3 1445 aa18.11■□□□□ 0.49
SCFD1-203ENST00000458591 FBLN1P23142 703 aa18.11■□□□□ 0.49
SCFD1-203ENST00000458591 IDI1Q13907 227 aa18.11■□□□□ 0.49
SCFD1-203ENST00000458591 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCFD1-203ENST00000458591 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
SCFD1-203ENST00000458591 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
SCFD1-203ENST00000458591 PPLO60437 1756 aa18.1■□□□□ 0.49
SCFD1-203ENST00000458591 ZC3H13Q5T200 1668 aaKnown RBP18.1■□□□□ 0.49
SCFD1-203ENST00000458591 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
SCFD1-203ENST00000458591 NINLQ9Y2I6 1382 aa18.1■□□□□ 0.49
SCFD1-203ENST00000458591 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
SCFD1-203ENST00000458591 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
SCFD1-203ENST00000458591 NLRP1Q9C000 1473 aa18.09■□□□□ 0.49
SCFD1-203ENST00000458591 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
SCFD1-203ENST00000458591 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
SCFD1-203ENST00000458591 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
SCFD1-203ENST00000458591 MYH16Q9H6N6 1097 aa18.08■□□□□ 0.48
SCFD1-203ENST00000458591 A0A1W2PP64 1363 aa18.08■□□□□ 0.48
SCFD1-203ENST00000458591 MVPQ14764 893 aaKnown RBP18.08■□□□□ 0.48
SCFD1-203ENST00000458591 TRIM35Q9UPQ4 493 aa18.08■□□□□ 0.48
SCFD1-203ENST00000458591 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
SCFD1-203ENST00000458591 GLI2P10070 1586 aa18.07■□□□□ 0.48
SCFD1-203ENST00000458591 RPGRIP1LQ68CZ1 1315 aa18.07■□□□□ 0.48
SCFD1-203ENST00000458591 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
SCFD1-203ENST00000458591 ABCC3O15438 1527 aa18.07■□□□□ 0.48
SCFD1-203ENST00000458591 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
SCFD1-203ENST00000458591 SSH1Q8WYL5 1049 aa18.06■□□□□ 0.48
SCFD1-203ENST00000458591 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
SCFD1-203ENST00000458591 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
SCFD1-203ENST00000458591 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
SCFD1-203ENST00000458591 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
SCFD1-203ENST00000458591 POGKQ9P215 609 aa18.06■□□□□ 0.48
SCFD1-203ENST00000458591 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
SCFD1-203ENST00000458591 RWDD1Q9H446 243 aaPredicted RBP18.05■□□□□ 0.48
SCFD1-203ENST00000458591 FYB1O15117 783 aa18.04■□□□□ 0.48
SCFD1-203ENST00000458591 TRIM27P14373 513 aa18.04■□□□□ 0.48
SCFD1-203ENST00000458591 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
SCFD1-203ENST00000458591 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
SCFD1-203ENST00000458591 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
SCFD1-203ENST00000458591 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
SCFD1-203ENST00000458591 MLH3Q9UHC1 1453 aa18.02■□□□□ 0.48
SCFD1-203ENST00000458591 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
SCFD1-203ENST00000458591 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
SCFD1-203ENST00000458591 NEXMIFQ5QGS0 1516 aa18.01■□□□□ 0.47
SCFD1-203ENST00000458591 RIPK4P57078 832 aa18.01■□□□□ 0.47
SCFD1-203ENST00000458591 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
SCFD1-203ENST00000458591 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
SCFD1-203ENST00000458591 BECN1Q14457 450 aa18■□□□□ 0.47
SCFD1-203ENST00000458591 TMEM57Q8N5G2 664 aa18■□□□□ 0.47
SCFD1-203ENST00000458591 ANTXR1Q9H6X2 564 aa18■□□□□ 0.47
SCFD1-203ENST00000458591 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
SCFD1-203ENST00000458591 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
SCFD1-203ENST00000458591 ABCC11Q96J66 1382 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms