RNA–Protein interactions for RNA: ENST00000454757.6

EGFR-206, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-206ENST00000454757 FOXD4L5Q5VV16 416 aaPredicted RBP17.87■□□□□ 0.45
EGFR-206ENST00000454757 FOXD4L4Q8WXT5 416 aaPredicted RBP17.87■□□□□ 0.45
EGFR-206ENST00000454757 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
EGFR-206ENST00000454757 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
EGFR-206ENST00000454757 BRMS1Q9HCU9 246 aa17.85■□□□□ 0.45
EGFR-206ENST00000454757 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
EGFR-206ENST00000454757 GNL3LQ9NVN8 582 aaKnown RBP17.85■□□□□ 0.45
EGFR-206ENST00000454757 SLC3A2P08195 630 aaKnown RBP17.85■□□□□ 0.45
EGFR-206ENST00000454757 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
EGFR-206ENST00000454757 XBP1P17861 261 aa17.85■□□□□ 0.45
EGFR-206ENST00000454757 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
EGFR-206ENST00000454757 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
EGFR-206ENST00000454757 DZIP1LQ8IYY4 767 aaKnown RBP17.84■□□□□ 0.45
EGFR-206ENST00000454757 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
EGFR-206ENST00000454757 CENPQQ7L2Z9 268 aaPredicted RBP17.84■□□□□ 0.45
EGFR-206ENST00000454757 CCDC70Q6NSX1 233 aa17.84■□□□□ 0.45
EGFR-206ENST00000454757 SART3Q15020 963 aaKnown RBP17.83■□□□□ 0.45
EGFR-206ENST00000454757 TMEM132EQ6IEE7 984 aa17.82■□□□□ 0.44
EGFR-206ENST00000454757 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.446e-7■■■□□ 15.2
EGFR-206ENST00000454757 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
EGFR-206ENST00000454757 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 CABP4P57796 275 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
EGFR-206ENST00000454757 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
EGFR-206ENST00000454757 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
EGFR-206ENST00000454757 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
EGFR-206ENST00000454757 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
EGFR-206ENST00000454757 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
EGFR-206ENST00000454757 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
EGFR-206ENST00000454757 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
EGFR-206ENST00000454757 PRG4Q92954 1404 aaPredicted RBP17.78■□□□□ 0.44
EGFR-206ENST00000454757 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 CNNM1Q9NRU3 951 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
EGFR-206ENST00000454757 SLC4A3P48751 1232 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.78■□□□□ 0.44
EGFR-206ENST00000454757 DDX11L8A8MPP1 907 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 GNAI3P08754 354 aa17.78■□□□□ 0.44
EGFR-206ENST00000454757 ANKRD50Q9ULJ7 1429 aa17.77■□□□□ 0.44
EGFR-206ENST00000454757 CLASRPQ8N2M8 674 aaKnown RBP17.77■□□□□ 0.44
EGFR-206ENST00000454757 PAF1Q8N7H5 531 aa17.77■□□□□ 0.44
EGFR-206ENST00000454757 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
EGFR-206ENST00000454757 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
EGFR-206ENST00000454757 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
EGFR-206ENST00000454757 IGF1RP08069 1367 aa17.75■□□□□ 0.43
EGFR-206ENST00000454757 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
EGFR-206ENST00000454757 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
EGFR-206ENST00000454757 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
EGFR-206ENST00000454757 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
EGFR-206ENST00000454757 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
EGFR-206ENST00000454757 ZNF644Q9H582 1327 aaPredicted RBP17.74■□□□□ 0.43
EGFR-206ENST00000454757 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
EGFR-206ENST00000454757 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
EGFR-206ENST00000454757 RBM5P52756 815 aaKnown RBP eCLIP17.73■□□□□ 0.43
EGFR-206ENST00000454757 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
EGFR-206ENST00000454757 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
EGFR-206ENST00000454757 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
EGFR-206ENST00000454757 ZNF530Q6P9A1 599 aaPredicted RBP17.72■□□□□ 0.43
EGFR-206ENST00000454757 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
EGFR-206ENST00000454757 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
EGFR-206ENST00000454757 EPS15P42566 896 aa17.72■□□□□ 0.43
EGFR-206ENST00000454757 CCAR2Q8N163 923 aaKnown RBP17.72■□□□□ 0.43
EGFR-206ENST00000454757 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
EGFR-206ENST00000454757 PDE4AP27815 886 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 CUX1P39880 1505 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
EGFR-206ENST00000454757 OFD1O75665 1012 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 CCDC73Q6ZRK6 1079 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
EGFR-206ENST00000454757 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
EGFR-206ENST00000454757 PSMA5P28066 241 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 SKOR2Q2VWA4 1001 aaPredicted RBP17.7■□□□□ 0.42
EGFR-206ENST00000454757 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
EGFR-206ENST00000454757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
EGFR-206ENST00000454757 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
EGFR-206ENST00000454757 EXOC6Q8TAG9 804 aa17.69■□□□□ 0.42
EGFR-206ENST00000454757 MTHFSP49914 203 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 ZFYVE27Q5T4F4 411 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 HIP1O00291 1037 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
EGFR-206ENST00000454757 AAMPQ13685 434 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
EGFR-206ENST00000454757 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
EGFR-206ENST00000454757 RDXP35241 583 aaKnown RBP17.67■□□□□ 0.42
EGFR-206ENST00000454757 HDGFL1Q5TGJ6 251 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms