RNA–Protein interactions for RNA: ENST00000454592.5

PHTF2-209, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best)

Gene PHTF2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-209ENST00000454592 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
PHTF2-209ENST00000454592 ZNF326Q5BKZ1 582 aaKnown RBP10.53□□□□□ -0.72
PHTF2-209ENST00000454592 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.72
PHTF2-209ENST00000454592 PIK3R4Q99570 1358 aa10.52□□□□□ -0.72
PHTF2-209ENST00000454592 KCNA6P17658 529 aa10.52□□□□□ -0.72
PHTF2-209ENST00000454592 SLC26A8Q96RN1 970 aa10.52□□□□□ -0.72
PHTF2-209ENST00000454592 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.72
PHTF2-209ENST00000454592 DIP2AQ14689 1571 aa10.52□□□□□ -0.73
PHTF2-209ENST00000454592 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
PHTF2-209ENST00000454592 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
PHTF2-209ENST00000454592 KIF1BO60333 1816 aa10.51□□□□□ -0.73
PHTF2-209ENST00000454592 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
PHTF2-209ENST00000454592 NWD1Q149M9 1564 aa10.5□□□□□ -0.73
PHTF2-209ENST00000454592 LRRC7Q96NW7 1537 aa10.5□□□□□ -0.73
PHTF2-209ENST00000454592 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
PHTF2-209ENST00000454592 STRCP1A6NGW2 1772 aa10.5□□□□□ -0.73
PHTF2-209ENST00000454592 NRXN3Q9Y4C0 1643 aa10.49□□□□□ -0.73
PHTF2-209ENST00000454592 RGL2O15211 777 aa10.49□□□□□ -0.73
PHTF2-209ENST00000454592 BCANQ96GW7 911 aa10.48□□□□□ -0.73
PHTF2-209ENST00000454592 RGL3Q3MIN7 710 aa10.48□□□□□ -0.73
PHTF2-209ENST00000454592 PTPRUQ92729 1446 aa10.47□□□□□ -0.73
PHTF2-209ENST00000454592 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
PHTF2-209ENST00000454592 METP08581 1390 aa10.46□□□□□ -0.73
PHTF2-209ENST00000454592 ADGRF5Q8IZF2 1346 aa10.46□□□□□ -0.73
PHTF2-209ENST00000454592 NRXN1Q9ULB1 1477 aa10.46□□□□□ -0.73
PHTF2-209ENST00000454592 PPLO60437 1756 aa10.46□□□□□ -0.73
PHTF2-209ENST00000454592 PRAG1Q86YV5 1406 aa10.46□□□□□ -0.74
PHTF2-209ENST00000454592 STAC3Q96MF2 364 aa10.46□□□□□ -0.74
PHTF2-209ENST00000454592 TMEM94Q12767 1356 aa10.46□□□□□ -0.74
PHTF2-209ENST00000454592 MYOM2P54296 1465 aa10.45□□□□□ -0.74
PHTF2-209ENST00000454592 PIK3C2GO75747 1445 aa10.45□□□□□ -0.74
PHTF2-209ENST00000454592 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
PHTF2-209ENST00000454592 PYGBP11216 843 aa10.45□□□□□ -0.74
PHTF2-209ENST00000454592 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
PHTF2-209ENST00000454592 ALKQ9UM73 1620 aa10.44□□□□□ -0.74
PHTF2-209ENST00000454592 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
PHTF2-209ENST00000454592 IFT172Q9UG01 1749 aa10.44□□□□□ -0.74
PHTF2-209ENST00000454592 TOM1O60784 492 aa10.43□□□□□ -0.74
PHTF2-209ENST00000454592 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
PHTF2-209ENST00000454592 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
PHTF2-209ENST00000454592 XRN1Q8IZH2 1706 aaKnown RBP10.43□□□□□ -0.74
PHTF2-209ENST00000454592 UBAP1LF5GYI3 381 aa10.43□□□□□ -0.74
PHTF2-209ENST00000454592 C14orf93Q9H972 538 aaKnown RBP10.42□□□□□ -0.74
PHTF2-209ENST00000454592 PTCH1Q13635 1447 aa10.42□□□□□ -0.74
PHTF2-209ENST00000454592 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
PHTF2-209ENST00000454592 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
PHTF2-209ENST00000454592 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
PHTF2-209ENST00000454592 XIRP1Q702N8 1843 aaKnown RBP10.41□□□□□ -0.74
PHTF2-209ENST00000454592 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
PHTF2-209ENST00000454592 TECPR2O15040 1411 aa10.4□□□□□ -0.74
PHTF2-209ENST00000454592 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
PHTF2-209ENST00000454592 ASXL1Q8IXJ9 1541 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
PHTF2-209ENST00000454592 MSH6P52701 1360 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 DCCP43146 1447 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
PHTF2-209ENST00000454592 C19orf44Q9H6X5 657 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
PHTF2-209ENST00000454592 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
PHTF2-209ENST00000454592 FAM135BQ49AJ0 1406 aa10.37□□□□□ -0.75
PHTF2-209ENST00000454592 CFAP70Q5T0N1 1121 aa10.37□□□□□ -0.75
PHTF2-209ENST00000454592 SIRT1Q96EB6 747 aa10.37□□□□□ -0.75
PHTF2-209ENST00000454592 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
PHTF2-209ENST00000454592 SIN3AQ96ST3 1273 aa10.36□□□□□ -0.75
PHTF2-209ENST00000454592 LAMC1P11047 1609 aa10.36□□□□□ -0.75
PHTF2-209ENST00000454592 YTHDC2Q9H6S0 1430 aaKnown RBP10.36□□□□□ -0.75
PHTF2-209ENST00000454592 ADGRB1O14514 1584 aa10.35□□□□□ -0.75
PHTF2-209ENST00000454592 TMEM132EQ6IEE7 984 aa10.35□□□□□ -0.75
PHTF2-209ENST00000454592 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
PHTF2-209ENST00000454592 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
PHTF2-209ENST00000454592 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
PHTF2-209ENST00000454592 RIOK3O14730 519 aaKnown RBP10.34□□□□□ -0.75
PHTF2-209ENST00000454592 L3MBTL2Q969R5 705 aa10.34□□□□□ -0.75
PHTF2-209ENST00000454592 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
PHTF2-209ENST00000454592 SLAIN2Q9P270 581 aa10.34□□□□□ -0.75
PHTF2-209ENST00000454592 ATF3P18847 181 aa10.33□□□□□ -0.76
PHTF2-209ENST00000454592 C14orf37Q86TY3 774 aa10.33□□□□□ -0.76
PHTF2-209ENST00000454592 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
PHTF2-209ENST00000454592 DLC1Q96QB1 1528 aa10.33□□□□□ -0.76
PHTF2-209ENST00000454592 KNDC1Q76NI1 1749 aa10.33□□□□□ -0.76
PHTF2-209ENST00000454592 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
PHTF2-209ENST00000454592 MST1RQ04912 1400 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 HSPA1LP34931 641 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 STK26Q9P289 416 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 MAP3K13O43283 966 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 PCDHB8Q9UN66 801 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
PHTF2-209ENST00000454592 NALCNQ8IZF0 1738 aa10.3□□□□□ -0.76
PHTF2-209ENST00000454592 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
PHTF2-209ENST00000454592 WAPLQ7Z5K2 1190 aa10.3□□□□□ -0.76
PHTF2-209ENST00000454592 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
PHTF2-209ENST00000454592 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
PHTF2-209ENST00000454592 BRINP3Q76B58 766 aa10.28□□□□□ -0.76
PHTF2-209ENST00000454592 C1orf167Q5SNV9 1468 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms