RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
VPS16-205ENST00000453689 RGPD8O14715 1765 aaPredicted RBP21.18■□□□□ 0.98
VPS16-205ENST00000453689 COL16A1Q07092 1604 aaPredicted RBP21.17■□□□□ 0.98
VPS16-205ENST00000453689 AHDC1Q5TGY3 1603 aaPredicted RBP21.17■□□□□ 0.98
VPS16-205ENST00000453689 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
VPS16-205ENST00000453689 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
VPS16-205ENST00000453689 SIRT1Q96EB6 747 aa21.15■□□□□ 0.98
VPS16-205ENST00000453689 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
VPS16-205ENST00000453689 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
VPS16-205ENST00000453689 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
VPS16-205ENST00000453689 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
VPS16-205ENST00000453689 ADGRB2O60241 1585 aa21.12■□□□□ 0.97
VPS16-205ENST00000453689 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
VPS16-205ENST00000453689 MED1Q15648 1581 aaPredicted RBP21.11■□□□□ 0.97
VPS16-205ENST00000453689 PRAM1Q96QH2 718 aa21.11■□□□□ 0.97
VPS16-205ENST00000453689 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
VPS16-205ENST00000453689 SAFB2Q14151 953 aaKnown RBP eCLIP21.08■□□□□ 0.97
VPS16-205ENST00000453689 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
VPS16-205ENST00000453689 POGKQ9P215 609 aa21.07■□□□□ 0.96
VPS16-205ENST00000453689 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
VPS16-205ENST00000453689 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
VPS16-205ENST00000453689 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
VPS16-205ENST00000453689 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
VPS16-205ENST00000453689 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
VPS16-205ENST00000453689 NUTM2FA1L443 756 aa21.02■□□□□ 0.96
VPS16-205ENST00000453689 DDX17Q92841 729 aaKnown RBP21.02■□□□□ 0.96
VPS16-205ENST00000453689 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
VPS16-205ENST00000453689 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
VPS16-205ENST00000453689 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
VPS16-205ENST00000453689 JCADQ9P266 1359 aa21■□□□□ 0.95
VPS16-205ENST00000453689 NBPF8Q3BBV2 869 aa20.99■□□□□ 0.95
VPS16-205ENST00000453689 ESCO1Q5FWF5 840 aa20.99■□□□□ 0.95
VPS16-205ENST00000453689 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
VPS16-205ENST00000453689 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
VPS16-205ENST00000453689 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
VPS16-205ENST00000453689 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
VPS16-205ENST00000453689 RALGAPBQ86X10 1494 aa20.94■□□□□ 0.94
VPS16-205ENST00000453689 PXDNQ92626 1479 aa20.94■□□□□ 0.94
VPS16-205ENST00000453689 TOPAZ1Q8N9V7 1692 aa20.94■□□□□ 0.94
VPS16-205ENST00000453689 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
VPS16-205ENST00000453689 WASLO00401 505 aaPredicted RBP20.93■□□□□ 0.94
VPS16-205ENST00000453689 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
VPS16-205ENST00000453689 NPHP3Q7Z494 1330 aa20.92■□□□□ 0.94
VPS16-205ENST00000453689 EIF3AQ14152 1382 aaKnown RBP20.92■□□□□ 0.94
VPS16-205ENST00000453689 GPRASP1Q5JY77 1395 aa20.92■□□□□ 0.94
VPS16-205ENST00000453689 COL22A1Q8NFW1 1626 aaPredicted RBP20.92■□□□□ 0.94
VPS16-205ENST00000453689 FOXO3O43524 673 aa20.91■□□□□ 0.94
VPS16-205ENST00000453689 LRP6O75581 1613 aa20.91■□□□□ 0.94
VPS16-205ENST00000453689 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
VPS16-205ENST00000453689 PNPLA6Q8IY17 1366 aa20.9■□□□□ 0.94
VPS16-205ENST00000453689 SPATA31A6Q5VVP1 1343 aa20.9■□□□□ 0.94
VPS16-205ENST00000453689 PRR36Q9H6K5 1346 aa20.9■□□□□ 0.94
VPS16-205ENST00000453689 TIMELESSQ9UNS1 1208 aa20.9■□□□□ 0.94
VPS16-205ENST00000453689 ATP7BP35670 1465 aa20.89■□□□□ 0.94
VPS16-205ENST00000453689 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
VPS16-205ENST00000453689 TRPM3Q9HCF6 1732 aaPredicted RBP20.89■□□□□ 0.93
VPS16-205ENST00000453689 MARF1Q9Y4F3 1742 aaKnown RBP20.88■□□□□ 0.93
VPS16-205ENST00000453689 XPCQ01831 940 aaPredicted RBP20.87■□□□□ 0.93
VPS16-205ENST00000453689 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
VPS16-205ENST00000453689 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
VPS16-205ENST00000453689 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
VPS16-205ENST00000453689 CARD11Q9BXL7 1154 aa20.84■□□□□ 0.93
VPS16-205ENST00000453689 ALS2Q96Q42 1657 aa20.83■□□□□ 0.93
VPS16-205ENST00000453689 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
VPS16-205ENST00000453689 NUDT16Q96DE0 195 aaKnown RBP20.83■□□□□ 0.93
VPS16-205ENST00000453689 ABCA3Q99758 1704 aa20.83■□□□□ 0.92
VPS16-205ENST00000453689 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
VPS16-205ENST00000453689 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
VPS16-205ENST00000453689 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
VPS16-205ENST00000453689 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
VPS16-205ENST00000453689 TNS3Q68CZ2 1445 aa20.79■□□□□ 0.92
VPS16-205ENST00000453689 PSME1Q06323 249 aa20.79■□□□□ 0.92
VPS16-205ENST00000453689 MEX3CQ5U5Q3 659 aaKnown RBP20.79■□□□□ 0.92
VPS16-205ENST00000453689 ILDR2Q71H61 639 aa20.79■□□□□ 0.92
VPS16-205ENST00000453689 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
VPS16-205ENST00000453689 SBNO1A3KN83 1393 aa20.78■□□□□ 0.92
VPS16-205ENST00000453689 SRPK2P78362 688 aaKnown RBP20.78■□□□□ 0.92
VPS16-205ENST00000453689 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
VPS16-205ENST00000453689 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.92
VPS16-205ENST00000453689 AKAP12Q02952 1782 aa20.77■□□□□ 0.91
VPS16-205ENST00000453689 EVC2Q86UK5 1308 aa20.77■□□□□ 0.91
VPS16-205ENST00000453689 SBNO2Q9Y2G9 1366 aa20.76■□□□□ 0.91
VPS16-205ENST00000453689 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
VPS16-205ENST00000453689 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
VPS16-205ENST00000453689 PPIP5K1Q6PFW1 1433 aa20.75■□□□□ 0.91
VPS16-205ENST00000453689 POLR3AO14802 1390 aaPredicted RBP20.74■□□□□ 0.91
VPS16-205ENST00000453689 ACEP12821 1306 aa20.73■□□□□ 0.91
VPS16-205ENST00000453689 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
VPS16-205ENST00000453689 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
VPS16-205ENST00000453689 ADAMTS2O95450 1211 aa20.7■□□□□ 0.9
VPS16-205ENST00000453689 LMOD2Q6P5Q4 547 aa20.7■□□□□ 0.9
VPS16-205ENST00000453689 PHRF1Q9P1Y6 1649 aaKnown RBP20.7■□□□□ 0.9
VPS16-205ENST00000453689 POTEAQ6S8J7 498 aa20.69■□□□□ 0.9
VPS16-205ENST00000453689 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
VPS16-205ENST00000453689 PLCH1Q4KWH8 1693 aa20.68■□□□□ 0.9
VPS16-205ENST00000453689 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
VPS16-205ENST00000453689 AFF2P51816 1311 aa20.68■□□□□ 0.9
VPS16-205ENST00000453689 USP47Q96K76 1375 aa20.68■□□□□ 0.9
VPS16-205ENST00000453689 ST20-MTHFSA0A0A6YYL1 179 aa20.67■□□□□ 0.9
VPS16-205ENST00000453689 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms