RNA–Protein interactions for RNA: ENST00000453316.1

BUD23-212, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-212ENST00000453316 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.65
BUD23-212ENST00000453316 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
BUD23-212ENST00000453316 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
BUD23-212ENST00000453316 RXRBP28702 533 aa19.1■□□□□ 0.65
BUD23-212ENST00000453316 AFF2P51816 1311 aa19.09■□□□□ 0.65
BUD23-212ENST00000453316 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
BUD23-212ENST00000453316 NAIPQ13075 1403 aa19.08■□□□□ 0.64
BUD23-212ENST00000453316 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
BUD23-212ENST00000453316 CDK12Q9NYV4 1490 aaPredicted RBP19.06■□□□□ 0.64
BUD23-212ENST00000453316 KIF1BO60333 1816 aa19.05■□□□□ 0.64
BUD23-212ENST00000453316 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
BUD23-212ENST00000453316 C1orf167Q5SNV9 1468 aa19.04■□□□□ 0.64
BUD23-212ENST00000453316 ROBO2Q9HCK4 1378 aa19.04■□□□□ 0.64
BUD23-212ENST00000453316 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
BUD23-212ENST00000453316 C8orf37Q96NL8 207 aa19.03■□□□□ 0.64
BUD23-212ENST00000453316 RGS12O14924 1447 aa19■□□□□ 0.63
BUD23-212ENST00000453316 LAMC1P11047 1609 aa19■□□□□ 0.63
BUD23-212ENST00000453316 ORAI2Q96SN7 254 aa19■□□□□ 0.63
BUD23-212ENST00000453316 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
BUD23-212ENST00000453316 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
BUD23-212ENST00000453316 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
BUD23-212ENST00000453316 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
BUD23-212ENST00000453316 SOS2Q07890 1332 aaPredicted RBP18.98■□□□□ 0.63
BUD23-212ENST00000453316 RBM6P78332 1123 aaKnown RBP18.97■□□□□ 0.63
BUD23-212ENST00000453316 NGLY1Q96IV0 654 aa18.96■□□□□ 0.63
BUD23-212ENST00000453316 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
BUD23-212ENST00000453316 HFM1A2PYH4 1435 aa18.95■□□□□ 0.62
BUD23-212ENST00000453316 PPLO60437 1756 aa18.94■□□□□ 0.62
BUD23-212ENST00000453316 COL22A1Q8NFW1 1626 aaPredicted RBP18.89■□□□□ 0.62
BUD23-212ENST00000453316 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
BUD23-212ENST00000453316 USP21Q9UK80 565 aa18.89■□□□□ 0.61
BUD23-212ENST00000453316 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.61
BUD23-212ENST00000453316 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
BUD23-212ENST00000453316 MYOM2P54296 1465 aa18.87■□□□□ 0.61
BUD23-212ENST00000453316 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
BUD23-212ENST00000453316 ESCO1Q5FWF5 840 aa18.87■□□□□ 0.61
BUD23-212ENST00000453316 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
BUD23-212ENST00000453316 PXDNQ92626 1479 aa18.87■□□□□ 0.61
BUD23-212ENST00000453316 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
BUD23-212ENST00000453316 ATRNO75882 1429 aa18.85■□□□□ 0.61
BUD23-212ENST00000453316 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
BUD23-212ENST00000453316 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
BUD23-212ENST00000453316 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
BUD23-212ENST00000453316 TECPR2O15040 1411 aa18.83■□□□□ 0.61
BUD23-212ENST00000453316 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.61
BUD23-212ENST00000453316 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.61
BUD23-212ENST00000453316 FOXO3O43524 673 aa18.83■□□□□ 0.6
BUD23-212ENST00000453316 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
BUD23-212ENST00000453316 STK26Q9P289 416 aa18.83■□□□□ 0.6
BUD23-212ENST00000453316 CCDC144AA2RUR9 1427 aa18.83■□□□□ 0.6
BUD23-212ENST00000453316 NUTM2FA1L443 756 aa18.82■□□□□ 0.6
BUD23-212ENST00000453316 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
BUD23-212ENST00000453316 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
BUD23-212ENST00000453316 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
BUD23-212ENST00000453316 IFT172Q9UG01 1749 aa18.81■□□□□ 0.6
BUD23-212ENST00000453316 TMEM132EQ6IEE7 984 aa18.81■□□□□ 0.6
BUD23-212ENST00000453316 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
BUD23-212ENST00000453316 ABCC11Q96J66 1382 aa18.8■□□□□ 0.6
BUD23-212ENST00000453316 EP400Q96L91 3159 aa18.79■□□□□ 0.6
BUD23-212ENST00000453316 MARF1Q9Y4F3 1742 aaKnown RBP18.79■□□□□ 0.6
BUD23-212ENST00000453316 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
BUD23-212ENST00000453316 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
BUD23-212ENST00000453316 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
BUD23-212ENST00000453316 MPHOSPH9Q99550 1183 aa18.77■□□□□ 0.6
BUD23-212ENST00000453316 FMN2Q9NZ56 1722 aa18.76■□□□□ 0.59
BUD23-212ENST00000453316 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
BUD23-212ENST00000453316 GJD4Q96KN9 370 aaPredicted RBP18.74■□□□□ 0.59
BUD23-212ENST00000453316 SPATA31A3Q5VYP0 1347 aa18.74■□□□□ 0.59
BUD23-212ENST00000453316 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
BUD23-212ENST00000453316 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
BUD23-212ENST00000453316 SLIT2O94813 1529 aa18.72■□□□□ 0.59
BUD23-212ENST00000453316 GLI3P10071 1580 aa18.71■□□□□ 0.59
BUD23-212ENST00000453316 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
BUD23-212ENST00000453316 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
BUD23-212ENST00000453316 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
BUD23-212ENST00000453316 SIRT1Q96EB6 747 aa18.69■□□□□ 0.58
BUD23-212ENST00000453316 C14orf93Q9H972 538 aaKnown RBP18.69■□□□□ 0.58
BUD23-212ENST00000453316 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
BUD23-212ENST00000453316 ZRANB1Q9UGI0 708 aa18.68■□□□□ 0.58
BUD23-212ENST00000453316 NRXN1Q9ULB1 1477 aa18.68■□□□□ 0.58
BUD23-212ENST00000453316 RGPD8O14715 1765 aaPredicted RBP18.68■□□□□ 0.58
BUD23-212ENST00000453316 CFAP70Q5T0N1 1121 aa18.67■□□□□ 0.58
BUD23-212ENST00000453316 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
BUD23-212ENST00000453316 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
BUD23-212ENST00000453316 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
BUD23-212ENST00000453316 CABLES1Q8TDN4 633 aa18.66■□□□□ 0.58
BUD23-212ENST00000453316 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.57
BUD23-212ENST00000453316 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
BUD23-212ENST00000453316 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
BUD23-212ENST00000453316 PLEKHG5O94827 1062 aa18.63■□□□□ 0.57
BUD23-212ENST00000453316 BRWD3Q6RI45 1802 aa18.63■□□□□ 0.57
BUD23-212ENST00000453316 PSME1Q06323 249 aa18.62■□□□□ 0.57
BUD23-212ENST00000453316 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
BUD23-212ENST00000453316 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
BUD23-212ENST00000453316 PLCH1Q4KWH8 1693 aa18.61■□□□□ 0.57
BUD23-212ENST00000453316 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
BUD23-212ENST00000453316 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
BUD23-212ENST00000453316 VPS72Q15906 364 aa18.61■□□□□ 0.57
BUD23-212ENST00000453316 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
BUD23-212ENST00000453316 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms