RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 TUSC1Q2TAM9 212 aa8.01□□□□□ -1.13
VPS8-211ENST00000452140 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
VPS8-211ENST00000452140 NUTM2DQ5VT03 806 aaPredicted RBP8.01□□□□□ -1.13
VPS8-211ENST00000452140 NUTM2AQ8IVF1 878 aaPredicted RBP8.01□□□□□ -1.13
VPS8-211ENST00000452140 HRCP23327 699 aa8□□□□□ -1.13
VPS8-211ENST00000452140 GJA5P36382 358 aa8□□□□□ -1.13
VPS8-211ENST00000452140 KMT5BQ4FZB7 885 aa8□□□□□ -1.13
VPS8-211ENST00000452140 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
VPS8-211ENST00000452140 ZMYND15Q9H091 742 aa8□□□□□ -1.13
VPS8-211ENST00000452140 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
VPS8-211ENST00000452140 CLUAP1Q96AJ1 413 aa7.99□□□□□ -1.13
VPS8-211ENST00000452140 ZBTB3Q9H5J0 574 aa7.99□□□□□ -1.13
VPS8-211ENST00000452140 SNRKQ9NRH2 765 aa7.99□□□□□ -1.13
VPS8-211ENST00000452140 AP1G2O75843 785 aa7.98□□□□□ -1.13
VPS8-211ENST00000452140 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
VPS8-211ENST00000452140 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
VPS8-211ENST00000452140 APLP1P51693 650 aa7.98□□□□□ -1.13
VPS8-211ENST00000452140 NECTIN2Q92692 538 aa7.98□□□□□ -1.13
VPS8-211ENST00000452140 C6orf229H3BNL8 230 aa7.97□□□□□ -1.13
VPS8-211ENST00000452140 ACTN4O43707 911 aaKnown RBP7.97□□□□□ -1.13
VPS8-211ENST00000452140 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
VPS8-211ENST00000452140 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
VPS8-211ENST00000452140 TSC1Q92574 1164 aa7.97□□□□□ -1.13
VPS8-211ENST00000452140 MTMR2Q13614 643 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 LAPTM4AQ15012 233 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 MORN1Q5T089 497 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 Q6ZNB5 142 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 POM121Q96HA1 1249 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 SLC27A5Q9Y2P5 690 aa7.96□□□□□ -1.14
VPS8-211ENST00000452140 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
VPS8-211ENST00000452140 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
VPS8-211ENST00000452140 IL21Q9HBE4 155 aa7.95□□□□□ -1.14
VPS8-211ENST00000452140 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
VPS8-211ENST00000452140 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
VPS8-211ENST00000452140 USP17L8P0C7I0 530 aa7.94□□□□□ -1.14
VPS8-211ENST00000452140 MTMR14Q8NCE2 650 aa7.94□□□□□ -1.14
VPS8-211ENST00000452140 BANK1Q8NDB2 785 aa7.94□□□□□ -1.14
VPS8-211ENST00000452140 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
VPS8-211ENST00000452140 MTRQ99707 1265 aa7.93□□□□□ -1.14
VPS8-211ENST00000452140 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
VPS8-211ENST00000452140 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
VPS8-211ENST00000452140 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
VPS8-211ENST00000452140 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
VPS8-211ENST00000452140 PRR7Q8TB68 274 aa7.91□□□□□ -1.14
VPS8-211ENST00000452140 ARID3CA6NKF2 412 aa7.9□□□□□ -1.14
VPS8-211ENST00000452140 COPS2P61201 443 aa7.9□□□□□ -1.14
VPS8-211ENST00000452140 LRRN4Q8WUT4 740 aa7.9□□□□□ -1.14
VPS8-211ENST00000452140 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
VPS8-211ENST00000452140 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
VPS8-211ENST00000452140 Q3C1V9 767 aa7.89□□□□□ -1.15
VPS8-211ENST00000452140 SCUBE3Q8IX30 993 aa7.89□□□□□ -1.15
VPS8-211ENST00000452140 HELBQ8NG08 1087 aaPredicted RBP7.89□□□□□ -1.15
VPS8-211ENST00000452140 A6NJR5 290 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 PER1O15534 1290 aaPredicted RBP7.88□□□□□ -1.15
VPS8-211ENST00000452140 RAD21O60216 631 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 GFRA3O60609 400 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 PPP1R18Q6NYC8 613 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 RETREG3Q86VR2 466 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
VPS8-211ENST00000452140 PRKD2Q9BZL6 878 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 GDPD2Q9HCC8 539 aa7.88□□□□□ -1.15
VPS8-211ENST00000452140 V9GY48 417 aaPredicted RBP7.88□□□□□ -1.15
VPS8-211ENST00000452140 NR1I2O75469 434 aa7.87□□□□□ -1.15
VPS8-211ENST00000452140 GGCXP38435 758 aa7.87□□□□□ -1.15
VPS8-211ENST00000452140 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
VPS8-211ENST00000452140 TBC1D2BQ9UPU7 963 aa7.87□□□□□ -1.15
VPS8-211ENST00000452140 TLL1O43897 1013 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 TRAK2O60296 914 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 ABL2P42684 1182 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 BRICD5Q6PL45 260 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 ZNF516Q92618 1163 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 THAP11Q96EK4 314 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
VPS8-211ENST00000452140 C1orf115Q9H7X2 142 aa7.86□□□□□ -1.15
VPS8-211ENST00000452140 FMNL1O95466 1100 aaPredicted RBP7.85□□□□□ -1.15
VPS8-211ENST00000452140 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
VPS8-211ENST00000452140 USB1Q9BQ65 265 aaKnown RBP7.85□□□□□ -1.15
VPS8-211ENST00000452140 APBB1O00213 710 aa7.84□□□□□ -1.15
VPS8-211ENST00000452140 TRIM34Q9BYJ4 488 aa7.84□□□□□ -1.15
VPS8-211ENST00000452140 NRG2O14511 850 aaPredicted RBP7.83□□□□□ -1.16
VPS8-211ENST00000452140 FNBP4Q8N3X1 1017 aaPredicted RBP7.83□□□□□ -1.16
VPS8-211ENST00000452140 ARID3AQ99856 593 aa7.83□□□□□ -1.16
VPS8-211ENST00000452140 PRDM9Q9NQV7 894 aa7.83□□□□□ -1.16
VPS8-211ENST00000452140 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
VPS8-211ENST00000452140 NR6A1Q15406 480 aa7.82□□□□□ -1.16
VPS8-211ENST00000452140 TRAF7Q6Q0C0 670 aa7.82□□□□□ -1.16
VPS8-211ENST00000452140 SPSB2Q99619 263 aa7.82□□□□□ -1.16
VPS8-211ENST00000452140 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
VPS8-211ENST00000452140 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
VPS8-211ENST00000452140 SOCS7O14512 581 aa7.81□□□□□ -1.16
VPS8-211ENST00000452140 ZPR1O75312 459 aa7.81□□□□□ -1.16
VPS8-211ENST00000452140 FAM160A2Q8N612 972 aaPredicted RBP7.81□□□□□ -1.16
VPS8-211ENST00000452140 NKX2-3Q8TAU0 364 aa7.81□□□□□ -1.16
VPS8-211ENST00000452140 GPR37L1O60883 481 aa7.8□□□□□ -1.16
VPS8-211ENST00000452140 JUNDP17535 347 aa7.8□□□□□ -1.16
VPS8-211ENST00000452140 DESI1Q6ICB0 168 aa7.8□□□□□ -1.16
VPS8-211ENST00000452140 LYPD8Q6UX82 237 aa7.8□□□□□ -1.16
VPS8-211ENST00000452140 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
VPS8-211ENST00000452140 ZNF330Q9Y3S2 320 aaPredicted RBP7.8□□□□□ -1.16
VPS8-211ENST00000452140 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms