RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 ZNF330Q9Y3S2 320 aaPredicted RBP12.6□□□□□ -0.39
CUL3-207ENST00000451538 GJA5P36382 358 aa12.59□□□□□ -0.39
CUL3-207ENST00000451538 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
CUL3-207ENST00000451538 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
CUL3-207ENST00000451538 PODXL2Q9NZ53 605 aa12.59□□□□□ -0.39
CUL3-207ENST00000451538 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
CUL3-207ENST00000451538 LILRB3O75022 631 aa12.57□□□□□ -0.4
CUL3-207ENST00000451538 USP46P62068 366 aa12.57□□□□□ -0.4
CUL3-207ENST00000451538 SERPINA10Q9UK55 444 aa12.57□□□□□ -0.4
CUL3-207ENST00000451538 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
CUL3-207ENST00000451538 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
CUL3-207ENST00000451538 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
CUL3-207ENST00000451538 ZBTB3Q9H5J0 574 aa12.56□□□□□ -0.4
CUL3-207ENST00000451538 ABL2P42684 1182 aa12.55□□□□□ -0.4
CUL3-207ENST00000451538 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
CUL3-207ENST00000451538 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
CUL3-207ENST00000451538 HOXA2O43364 376 aa12.54□□□□□ -0.4
CUL3-207ENST00000451538 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
CUL3-207ENST00000451538 FDX1P10109 184 aa12.54□□□□□ -0.4
CUL3-207ENST00000451538 GCGRP47871 477 aa12.54□□□□□ -0.4
CUL3-207ENST00000451538 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
CUL3-207ENST00000451538 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
CUL3-207ENST00000451538 WBP1LQ9NX94 342 aa12.54□□□□□ -0.4
CUL3-207ENST00000451538 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
CUL3-207ENST00000451538 KCNC4Q03721 635 aa12.53□□□□□ -0.4
CUL3-207ENST00000451538 PDIA4P13667 645 aaKnown RBP12.52□□□□□ -0.41
CUL3-207ENST00000451538 SOCS7O14512 581 aa12.5□□□□□ -0.41
CUL3-207ENST00000451538 HRCP23327 699 aa12.5□□□□□ -0.41
CUL3-207ENST00000451538 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
CUL3-207ENST00000451538 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
CUL3-207ENST00000451538 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
CUL3-207ENST00000451538 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
CUL3-207ENST00000451538 TSC1Q92574 1164 aa12.49□□□□□ -0.41
CUL3-207ENST00000451538 RNF40O75150 1001 aa12.48□□□□□ -0.41
CUL3-207ENST00000451538 SLC10A3P09131 477 aa12.48□□□□□ -0.41
CUL3-207ENST00000451538 Q6ZNB5 142 aa12.47□□□□□ -0.41
CUL3-207ENST00000451538 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
CUL3-207ENST00000451538 TSR3Q9UJK0 312 aaKnown RBP12.47□□□□□ -0.41
CUL3-207ENST00000451538 MTMR2Q13614 643 aa12.46□□□□□ -0.41
CUL3-207ENST00000451538 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
CUL3-207ENST00000451538 SLF2Q8IX21 1173 aa12.46□□□□□ -0.41
CUL3-207ENST00000451538 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
CUL3-207ENST00000451538 HLA-CQ95604 372 aa12.46□□□□□ -0.41
CUL3-207ENST00000451538 CALR3Q96L12 384 aaKnown RBP12.46□□□□□ -0.41
CUL3-207ENST00000451538 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
CUL3-207ENST00000451538 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
CUL3-207ENST00000451538 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
CUL3-207ENST00000451538 HPS5Q9UPZ3 1129 aa12.44□□□□□ -0.42
CUL3-207ENST00000451538 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
CUL3-207ENST00000451538 CFHP08603 1231 aa12.43□□□□□ -0.42
CUL3-207ENST00000451538 FUT2Q10981 343 aa12.41□□□□□ -0.42
CUL3-207ENST00000451538 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
CUL3-207ENST00000451538 GLMNQ92990 594 aa12.41□□□□□ -0.42
CUL3-207ENST00000451538 POM121CA8CG34 1229 aa12.4□□□□□ -0.42
CUL3-207ENST00000451538 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
CUL3-207ENST00000451538 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
CUL3-207ENST00000451538 LAPTM4AQ15012 233 aa12.39□□□□□ -0.43
CUL3-207ENST00000451538 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
CUL3-207ENST00000451538 HMX1Q9NP08 348 aaPredicted RBP12.38□□□□□ -0.43
CUL3-207ENST00000451538 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
CUL3-207ENST00000451538 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
CUL3-207ENST00000451538 CFAP99D6REC4 459 aa12.35□□□□□ -0.43
CUL3-207ENST00000451538 PPP4CP60510 307 aa12.35□□□□□ -0.43
CUL3-207ENST00000451538 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
CUL3-207ENST00000451538 LRRN4Q8WUT4 740 aa12.35□□□□□ -0.43
CUL3-207ENST00000451538 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CUL3-207ENST00000451538 IRF5Q13568 498 aa12.32□□□□□ -0.44
CUL3-207ENST00000451538 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
CUL3-207ENST00000451538 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
CUL3-207ENST00000451538 SYMPKQ92797 1274 aaKnown RBP12.31□□□□□ -0.44
CUL3-207ENST00000451538 GFRA3O60609 400 aa12.3□□□□□ -0.44
CUL3-207ENST00000451538 TJAP1Q5JTD0 557 aa12.3□□□□□ -0.44
CUL3-207ENST00000451538 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
CUL3-207ENST00000451538 VAC14Q08AM6 782 aa12.29□□□□□ -0.44
CUL3-207ENST00000451538 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
CUL3-207ENST00000451538 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
CUL3-207ENST00000451538 Q3C1V9 767 aa12.27□□□□□ -0.45
CUL3-207ENST00000451538 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
CUL3-207ENST00000451538 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.45
CUL3-207ENST00000451538 RETREG3Q86VR2 466 aa12.27□□□□□ -0.45
CUL3-207ENST00000451538 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.45
CUL3-207ENST00000451538 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
CUL3-207ENST00000451538 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
CUL3-207ENST00000451538 LCE2BO14633 110 aa12.25□□□□□ -0.45
CUL3-207ENST00000451538 EPS8L1Q8TE68 723 aa12.25□□□□□ -0.45
CUL3-207ENST00000451538 PRKD2Q9BZL6 878 aa12.25□□□□□ -0.45
CUL3-207ENST00000451538 ACTN4O43707 911 aaKnown RBP12.24□□□□□ -0.45
CUL3-207ENST00000451538 GPR37L1O60883 481 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 NR6A1Q15406 480 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 MORN1Q5T089 497 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 PNMA1Q8ND90 353 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 ADAMTS19Q8TE59 1207 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 IL21Q9HBE4 155 aa12.24□□□□□ -0.45
CUL3-207ENST00000451538 RFX1P22670 979 aa12.23□□□□□ -0.45
CUL3-207ENST00000451538 KCTD17Q8N5Z5 321 aa12.23□□□□□ -0.45
CUL3-207ENST00000451538 MTRQ99707 1265 aa12.23□□□□□ -0.45
CUL3-207ENST00000451538 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
CUL3-207ENST00000451538 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
CUL3-207ENST00000451538 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
CUL3-207ENST00000451538 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms