RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	APLP2	Q06481	763 aa		11.2	□□□□□ -0.62
HDLBP-222	ENST00000449504	FAM50A	Q14320	339 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-222	ENST00000449504	ESCO1	Q5FWF5	840 aa		11.2	□□□□□ -0.62
HDLBP-222	ENST00000449504	RNF39	Q9H2S5	420 aa		11.2	□□□□□ -0.62
HDLBP-222	ENST00000449504	CCDC9	Q9Y3X0	531 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-222	ENST00000449504	R3HDM1	Q15032	1099 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-222	ENST00000449504	RALGAPB	Q86X10	1494 aa		11.19	□□□□□ -0.62
HDLBP-222	ENST00000449504		A0A0G2JS52	829 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	FOXO3	O43524	673 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	PLEKHG5	O94827	1062 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	MYT1	Q01538	1121 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	MYOM2	P54296	1465 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	NALCN	Q8IZF0	1738 aa		11.18	□□□□□ -0.62
HDLBP-222	ENST00000449504	NPHP3	Q7Z494	1330 aa		11.17	□□□□□ -0.62
HDLBP-222	ENST00000449504	KRT27	Q7Z3Y8	459 aa		11.17	□□□□□ -0.62
HDLBP-222	ENST00000449504	HAP1	P54257	671 aa	Predicted RBP	11.16	□□□□□ -0.62
HDLBP-222	ENST00000449504	EN1	Q05925	392 aa	Predicted RBP	11.16	□□□□□ -0.62
HDLBP-222	ENST00000449504	EP400	Q96L91	3159 aa		11.16	□□□□□ -0.62
HDLBP-222	ENST00000449504	NRXN3	Q9Y4C0	1643 aa		11.16	□□□□□ -0.62
HDLBP-222	ENST00000449504	GLI3	P10071	1580 aa		11.16	□□□□□ -0.62
HDLBP-222	ENST00000449504	ADGRL2	O95490	1459 aa		11.15	□□□□□ -0.62
HDLBP-222	ENST00000449504	NUTM2F	A1L443	756 aa		11.15	□□□□□ -0.62
HDLBP-222	ENST00000449504		E9PCH4	1651 aa		11.14	□□□□□ -0.63
HDLBP-222	ENST00000449504	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-222	ENST00000449504	ROBO2	Q9HCK4	1378 aa		11.14	□□□□□ -0.63
HDLBP-222	ENST00000449504	LAMC1	P11047	1609 aa		11.13	□□□□□ -0.63
HDLBP-222	ENST00000449504	NUP155	O75694	1391 aa		11.13	□□□□□ -0.63
HDLBP-222	ENST00000449504	LOC105371045	A0A1W2PR82	267 aa		11.12	□□□□□ -0.63
HDLBP-222	ENST00000449504	HOXD11	P31277	338 aa	Predicted RBP	11.12	□□□□□ -0.63
HDLBP-222	ENST00000449504	VPS72	Q15906	364 aa		11.12	□□□□□ -0.63
HDLBP-222	ENST00000449504	SLIT2	O94813	1529 aa		11.12	□□□□□ -0.63
HDLBP-222	ENST00000449504	BRWD3	Q6RI45	1802 aa		11.12	□□□□□ -0.63
HDLBP-222	ENST00000449504	FAM182B	Q5T319	152 aa		11.11	□□□□□ -0.63
HDLBP-222	ENST00000449504	CABLES1	Q8TDN4	633 aa		11.11	□□□□□ -0.63
HDLBP-222	ENST00000449504	PXDN	Q92626	1479 aa		11.11	□□□□□ -0.63
HDLBP-222	ENST00000449504	ONECUT3	O60422	494 aa	Predicted RBP	11.1	□□□□□ -0.63
HDLBP-222	ENST00000449504	FAM98C	Q17RN3	349 aa	Known RBP	11.1	□□□□□ -0.63
HDLBP-222	ENST00000449504	LRPPRC	P42704	1394 aa	Known RBP	11.1	□□□□□ -0.63
HDLBP-222	ENST00000449504	MARF1	Q9Y4F3	1742 aa	Known RBP	11.09	□□□□□ -0.63
HDLBP-222	ENST00000449504	EZH2	Q15910	746 aa	Known RBP	11.09	□□□□□ -0.63
HDLBP-222	ENST00000449504	LMOD2	Q6P5Q4	547 aa		11.09	□□□□□ -0.63
HDLBP-222	ENST00000449504	SPATA31A3	Q5VYP0	1347 aa		11.09	□□□□□ -0.63
HDLBP-222	ENST00000449504	PPP4R3CP	Q6ZMV5	832 aa		11.08	□□□□□ -0.64
HDLBP-222	ENST00000449504	KRT28	Q7Z3Y7	464 aa		11.08	□□□□□ -0.64
HDLBP-222	ENST00000449504	SPHKAP	Q2M3C7	1700 aa		11.08	□□□□□ -0.64
HDLBP-222	ENST00000449504	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-222	ENST00000449504	VGF	O15240	615 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-222	ENST00000449504	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-222	ENST00000449504	HFM1	A2PYH4	1435 aa		11.07	□□□□□ -0.64
HDLBP-222	ENST00000449504	IQGAP3	Q86VI3	1631 aa		11.06	□□□□□ -0.64
HDLBP-222	ENST00000449504	ITGAE	P38570	1179 aa		11.05	□□□□□ -0.64
HDLBP-222	ENST00000449504	WAPL	Q7Z5K2	1190 aa		11.05	□□□□□ -0.64
HDLBP-222	ENST00000449504	STK26	Q9P289	416 aa		11.05	□□□□□ -0.64
HDLBP-222	ENST00000449504	NEXMIF	Q5QGS0	1516 aa		11.04	□□□□□ -0.64
HDLBP-222	ENST00000449504	SENP3-EIF4A1	A0A087X0R7	540 aa		11.04	□□□□□ -0.64
HDLBP-222	ENST00000449504	FAM83G	A6ND36	823 aa		11.04	□□□□□ -0.64
HDLBP-222	ENST00000449504	USP32	Q8NFA0	1604 aa		11.03	□□□□□ -0.64
HDLBP-222	ENST00000449504	TRIM37	O94972	964 aa		11.03	□□□□□ -0.64
HDLBP-222	ENST00000449504	PSME1	Q06323	249 aa		11.03	□□□□□ -0.64
HDLBP-222	ENST00000449504	IFFO2	Q5TF58	517 aa		11.03	□□□□□ -0.64
HDLBP-222	ENST00000449504	BTG4	Q9NY30	223 aa		11.03	□□□□□ -0.64
HDLBP-222	ENST00000449504	NAIP	Q13075	1403 aa		11.02	□□□□□ -0.64
HDLBP-222	ENST00000449504	APBA3	O96018	575 aa		11.02	□□□□□ -0.65
HDLBP-222	ENST00000449504	CAMKK2	Q96RR4	588 aa		11.02	□□□□□ -0.65
HDLBP-222	ENST00000449504	CCDC144A	A2RUR9	1427 aa		11.01	□□□□□ -0.65
HDLBP-222	ENST00000449504	CDC42BPG	Q6DT37	1551 aa		11	□□□□□ -0.65
HDLBP-222	ENST00000449504	NBPF8	Q3BBV2	869 aa		11	□□□□□ -0.65
HDLBP-222	ENST00000449504	NBPF14	Q5TI25	921 aa		11	□□□□□ -0.65
HDLBP-222	ENST00000449504	SPON1	Q9HCB6	807 aa		11	□□□□□ -0.65
HDLBP-222	ENST00000449504	PHF8	Q9UPP1	1060 aa		11	□□□□□ -0.65
HDLBP-222	ENST00000449504	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.99	□□□□□ -0.65
HDLBP-222	ENST00000449504	ROCK1	Q13464	1354 aa		10.99	□□□□□ -0.65
HDLBP-222	ENST00000449504	TNS3	Q68CZ2	1445 aa		10.99	□□□□□ -0.65
HDLBP-222	ENST00000449504	CLTCL1	P53675	1640 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	PLCH1	Q4KWH8	1693 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	RGPD1	P0DJD0	1748 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	KCNQ2	O43526	872 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	FAM196A	Q6ZSG2	479 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	PLEKHH1	Q9ULM0	1364 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	DISP2	A7MBM2	1401 aa		10.98	□□□□□ -0.65
HDLBP-222	ENST00000449504	C1QBP	Q07021	282 aa	Known RBP	10.97	□□□□□ -0.65
HDLBP-222	ENST00000449504	TMEM132E	Q6IEE7	984 aa		10.97	□□□□□ -0.65
HDLBP-222	ENST00000449504	RPGRIP1L	Q68CZ1	1315 aa		10.97	□□□□□ -0.65
HDLBP-222	ENST00000449504	PRAG1	Q86YV5	1406 aa		10.97	□□□□□ -0.65
HDLBP-222	ENST00000449504	NWD2	Q9ULI1	1742 aa		10.96	□□□□□ -0.65
HDLBP-222	ENST00000449504	SPATA31A5	Q5VU36	1347 aa		10.96	□□□□□ -0.65
HDLBP-222	ENST00000449504	SPATA31A7	Q8IWB4	1347 aa		10.96	□□□□□ -0.65
HDLBP-222	ENST00000449504	PMFBP1	Q8TBY8	1022 aa		10.96	□□□□□ -0.65
HDLBP-222	ENST00000449504	ARHGEF10	O15013	1369 aa		10.95	□□□□□ -0.66
HDLBP-222	ENST00000449504	NINL	Q9Y2I6	1382 aa		10.95	□□□□□ -0.66
HDLBP-222	ENST00000449504	C1QTNF8	P60827	252 aa		10.95	□□□□□ -0.66
HDLBP-222	ENST00000449504	SBNO1	A3KN83	1393 aa		10.94	□□□□□ -0.66
HDLBP-222	ENST00000449504	PARD3	Q8TEW0	1356 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	TNS1	Q9HBL0	1735 aa	Known RBP	10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	ADGRF5	Q8IZF2	1346 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	KIF1A	Q12756	1690 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	PDE3B	Q13370	1112 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	CNKSR2	Q8WXI2	1034 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	STRN4	Q9NRL3	753 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	RNF216	Q9NWF9	866 aa	Predicted RBP	10.93	□□□□□ -0.66

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