RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
NUP85-202ENST00000449421 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
NUP85-202ENST00000449421 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
NUP85-202ENST00000449421 PTPRUQ92729 1446 aa17.07■□□□□ 0.32
NUP85-202ENST00000449421 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
NUP85-202ENST00000449421 PANK3Q9H999 370 aa17.07■□□□□ 0.32
NUP85-202ENST00000449421 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
NUP85-202ENST00000449421 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
NUP85-202ENST00000449421 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
NUP85-202ENST00000449421 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
NUP85-202ENST00000449421 KCNA6P17658 529 aa17.06■□□□□ 0.32
NUP85-202ENST00000449421 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
NUP85-202ENST00000449421 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
NUP85-202ENST00000449421 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
NUP85-202ENST00000449421 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
NUP85-202ENST00000449421 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
NUP85-202ENST00000449421 TECPR2O15040 1411 aa17.04■□□□□ 0.32
NUP85-202ENST00000449421 TMC1Q8TDI8 760 aa17.04■□□□□ 0.32
NUP85-202ENST00000449421 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
NUP85-202ENST00000449421 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
NUP85-202ENST00000449421 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
NUP85-202ENST00000449421 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
NUP85-202ENST00000449421 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
NUP85-202ENST00000449421 CPS1P31327 1500 aa17.02■□□□□ 0.32
NUP85-202ENST00000449421 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
NUP85-202ENST00000449421 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
NUP85-202ENST00000449421 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP85-202ENST00000449421 PTCH1Q13635 1447 aa17■□□□□ 0.31
NUP85-202ENST00000449421 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
NUP85-202ENST00000449421 NLRP13Q86W25 1043 aa17■□□□□ 0.31
NUP85-202ENST00000449421 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
NUP85-202ENST00000449421 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
NUP85-202ENST00000449421 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
NUP85-202ENST00000449421 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
NUP85-202ENST00000449421 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
NUP85-202ENST00000449421 ZNF335Q9H4Z2 1342 aaPredicted RBP16.98■□□□□ 0.31
NUP85-202ENST00000449421 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
NUP85-202ENST00000449421 STK26Q9P289 416 aa16.97■□□□□ 0.31
NUP85-202ENST00000449421 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
NUP85-202ENST00000449421 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.31
NUP85-202ENST00000449421 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.31
NUP85-202ENST00000449421 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
NUP85-202ENST00000449421 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
NUP85-202ENST00000449421 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
NUP85-202ENST00000449421 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
NUP85-202ENST00000449421 POGKQ9P215 609 aa16.93■□□□□ 0.3
NUP85-202ENST00000449421 QRICH2Q9H0J4 1663 aa16.93■□□□□ 0.3
NUP85-202ENST00000449421 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
NUP85-202ENST00000449421 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
NUP85-202ENST00000449421 ZBED9Q6R2W3 1325 aa16.92■□□□□ 0.3
NUP85-202ENST00000449421 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
NUP85-202ENST00000449421 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
NUP85-202ENST00000449421 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
NUP85-202ENST00000449421 INSRP06213 1382 aa16.9■□□□□ 0.3
NUP85-202ENST00000449421 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
NUP85-202ENST00000449421 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
NUP85-202ENST00000449421 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
NUP85-202ENST00000449421 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
NUP85-202ENST00000449421 ADGRB2O60241 1585 aa16.89■□□□□ 0.29
NUP85-202ENST00000449421 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
NUP85-202ENST00000449421 MYOM1P52179 1685 aa16.87■□□□□ 0.29
NUP85-202ENST00000449421 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
NUP85-202ENST00000449421 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
NUP85-202ENST00000449421 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
NUP85-202ENST00000449421 NEFLP07196 543 aa16.86■□□□□ 0.29
NUP85-202ENST00000449421 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
NUP85-202ENST00000449421 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
NUP85-202ENST00000449421 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
NUP85-202ENST00000449421 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
NUP85-202ENST00000449421 DCCP43146 1447 aa16.84■□□□□ 0.29
NUP85-202ENST00000449421 CDC42BPGQ6DT37 1551 aa16.84■□□□□ 0.29
NUP85-202ENST00000449421 ANKRD36BQ8N2N9 1353 aa16.82■□□□□ 0.28
NUP85-202ENST00000449421 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP85-202ENST00000449421 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
NUP85-202ENST00000449421 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
NUP85-202ENST00000449421 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
NUP85-202ENST00000449421 NSD2O96028 1365 aa16.81■□□□□ 0.28
NUP85-202ENST00000449421 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
NUP85-202ENST00000449421 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
NUP85-202ENST00000449421 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
NUP85-202ENST00000449421 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
NUP85-202ENST00000449421 MSH6P52701 1360 aa16.8■□□□□ 0.28
NUP85-202ENST00000449421 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
NUP85-202ENST00000449421 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
NUP85-202ENST00000449421 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
NUP85-202ENST00000449421 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
NUP85-202ENST00000449421 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
NUP85-202ENST00000449421 CERKQ8TCT0 537 aa16.79■□□□□ 0.28
NUP85-202ENST00000449421 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
NUP85-202ENST00000449421 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
NUP85-202ENST00000449421 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
NUP85-202ENST00000449421 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
NUP85-202ENST00000449421 NSD3Q9BZ95 1437 aa16.78■□□□□ 0.28
NUP85-202ENST00000449421 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
NUP85-202ENST00000449421 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
NUP85-202ENST00000449421 USP32Q8NFA0 1604 aa16.77■□□□□ 0.27
NUP85-202ENST00000449421 RGPD8O14715 1765 aaPredicted RBP16.76■□□□□ 0.27
NUP85-202ENST00000449421 ATF3P18847 181 aa16.75■□□□□ 0.27
NUP85-202ENST00000449421 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
NUP85-202ENST00000449421 MST1RQ04912 1400 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms