RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KDM5BQ9UGL1 1544 aa7.26□□□□□ -1.25
CDC42BPA-209ENST00000448940 TRPC5Q9UL62 973 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-209ENST00000448940 TARBP1Q13395 1621 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-209ENST00000448940 RAPGEF6Q8TEU7 1601 aa7.26□□□□□ -1.25
CDC42BPA-209ENST00000448940 TCERG1O14776 1098 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-209ENST00000448940 NUP153P49790 1475 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-209ENST00000448940 SPDYE4A6NLX3 237 aa7.25□□□□□ -1.25
CDC42BPA-209ENST00000448940 ZNF622Q969S3 477 aaKnown RBP eCLIP7.25□□□□□ -1.256e-8■■□□□ 13
CDC42BPA-209ENST00000448940 LMOD3Q0VAK6 560 aa7.25□□□□□ -1.25
CDC42BPA-209ENST00000448940 RBM5P52756 815 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 NUDT16Q96DE0 195 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 WAPLQ7Z5K2 1190 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 TMEM87AQ8NBN3 555 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 STK31Q9BXU1 1019 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 SPG7Q9UQ90 795 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 YEATS2Q9ULM3 1422 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 HRCP23327 699 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 PLEKHO1Q53GL0 409 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 HDAC9Q9UKV0 1011 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 BICDL1Q6ZP65 573 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 BCL2L13Q9BXK5 485 aa7.24□□□□□ -1.25
CDC42BPA-209ENST00000448940 DPY19L2Q6NUT2 758 aa7.23□□□□□ -1.25
CDC42BPA-209ENST00000448940 HSP90AB1P08238 724 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-209ENST00000448940 CAMSAP2Q08AD1 1489 aa7.23□□□□□ -1.25
CDC42BPA-209ENST00000448940 RIMS2Q9UQ26 1411 aa7.23□□□□□ -1.25
CDC42BPA-209ENST00000448940 DAPK1P53355 1430 aa7.23□□□□□ -1.25
CDC42BPA-209ENST00000448940 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 PBRM1Q86U86 1689 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 ROCK1Q13464 1354 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 DDB1Q16531 1140 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 CRBNQ96SW2 442 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 DISP1Q96F81 1524 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 PTPRKQ15262 1439 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 ABCA5Q8WWZ7 1642 aa7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-209ENST00000448940 GPATCH8Q9UKJ3 1502 aaKnown RBP7.21□□□□□ -1.25
CDC42BPA-209ENST00000448940 PSDA5PKW4 1024 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-209ENST00000448940 RFX1P22670 979 aa7.21□□□□□ -1.25
CDC42BPA-209ENST00000448940 RFC4P35249 363 aa7.21□□□□□ -1.25
CDC42BPA-209ENST00000448940 TMEM94Q12767 1356 aa7.21□□□□□ -1.25
CDC42BPA-209ENST00000448940 ST20-MTHFSA0A0A6YYL1 179 aa7.21□□□□□ -1.26
CDC42BPA-209ENST00000448940 NPHP4O75161 1426 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-209ENST00000448940 VPS53Q5VIR6 699 aa7.21□□□□□ -1.26
CDC42BPA-209ENST00000448940 HSP90B1P14625 803 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 CHRNA2Q15822 529 aa7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 TCEAL9Q9UHQ7 104 aa7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 CABP4P57796 275 aa7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 MAGI3Q5TCQ9 1506 aa7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 GPBP1L1Q9HC44 474 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 ABT1Q9ULW3 272 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-209ENST00000448940 NF2P35240 595 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 FAM98CQ17RN3 349 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 GGNBP2Q9H3C7 697 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 ATF5Q9Y2D1 282 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 WASLO00401 505 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 GLIPR1L2Q4G1C9 344 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 ACSBG1Q96GR2 724 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 KDM4FA0A1W2PPD8 638 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 ATAD2Q6PL18 1390 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 HSPA1LP34931 641 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 PARP3Q9Y6F1 533 aa7.19□□□□□ -1.26
CDC42BPA-209ENST00000448940 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 SUPT6HQ7KZ85 1726 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 SYCP2Q9BX26 1530 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 DIEXFQ68CQ4 756 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 NEXNQ0ZGT2 675 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 AMOTL1Q8IY63 956 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 SPON1Q9HCB6 807 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 KTN1Q86UP2 1357 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 CHMP4BQ9H444 224 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 BTG4Q9NY30 223 aa7.18□□□□□ -1.26
CDC42BPA-209ENST00000448940 DIAPH1O60610 1272 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 WDR78Q5VTH9 848 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 TMOD3Q9NYL9 352 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 DDRGK1Q96HY6 314 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 APBB1O00213 710 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 BCS1LQ9Y276 419 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 TMEM2Q9UHN6 1383 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 RBM6P78332 1123 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 ZNF530Q6P9A1 599 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 PRM3Q9NNZ6 103 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 ZNF710Q8N1W2 664 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 HSPA5P11021 654 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 CABLES1Q8TDN4 633 aa7.17□□□□□ -1.26
CDC42BPA-209ENST00000448940 FCHSD2O94868 740 aa7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 CFAP74Q9C0B2 1584 aa7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 MPRIPQ6WCQ1 1025 aa7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 FTSJ3Q8IY81 847 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms