RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 TONSLQ96HA7 1378 aa29.51■■■□□ 2.32
PTX4-203ENST00000447419 KNDC1Q76NI1 1749 aa29.51■■■□□ 2.31
PTX4-203ENST00000447419 BRINP3Q76B58 766 aa29.49■■■□□ 2.31
PTX4-203ENST00000447419 HIRIP3Q9BW71 556 aaPredicted RBP29.47■■■□□ 2.31
PTX4-203ENST00000447419 NBPF8Q3BBV2 869 aa29.46■■■□□ 2.31
PTX4-203ENST00000447419 DDX17Q92841 729 aaKnown RBP29.46■■■□□ 2.31
PTX4-203ENST00000447419 SIRT1Q96EB6 747 aa29.45■■■□□ 2.3
PTX4-203ENST00000447419 ORAI2Q96SN7 254 aa29.45■■■□□ 2.3
PTX4-203ENST00000447419 CCER1Q8TC90 406 aaPredicted RBP29.44■■■□□ 2.3
PTX4-203ENST00000447419 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
PTX4-203ENST00000447419 C1orf167Q5SNV9 1468 aa29.44■■■□□ 2.3
PTX4-203ENST00000447419 DLC1Q96QB1 1528 aa29.41■■■□□ 2.3
PTX4-203ENST00000447419 CDC42BPGQ6DT37 1551 aa29.39■■■□□ 2.29
PTX4-203ENST00000447419 ESCO1Q5FWF5 840 aa29.38■■■□□ 2.29
PTX4-203ENST00000447419 ROCK2O75116 1388 aaKnown RBP29.37■■■□□ 2.29
PTX4-203ENST00000447419 KIAA1210Q9ULL0 1709 aa29.37■■■□□ 2.29
PTX4-203ENST00000447419 PHLPP1O60346 1717 aa29.35■■■□□ 2.29
PTX4-203ENST00000447419 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
PTX4-203ENST00000447419 ARHGEF28Q8N1W1 1705 aaKnown RBP29.33■■■□□ 2.29
PTX4-203ENST00000447419 XPCQ01831 940 aaPredicted RBP29.3■■■□□ 2.28
PTX4-203ENST00000447419 AHDC1Q5TGY3 1603 aaPredicted RBP29.28■■■□□ 2.28
PTX4-203ENST00000447419 COL16A1Q07092 1604 aaPredicted RBP29.28■■■□□ 2.28
PTX4-203ENST00000447419 FMN2Q9NZ56 1722 aa29.27■■■□□ 2.28
PTX4-203ENST00000447419 FOXO3O43524 673 aa29.26■■■□□ 2.27
PTX4-203ENST00000447419 WASLO00401 505 aaPredicted RBP29.25■■■□□ 2.27
PTX4-203ENST00000447419 CENPJQ9HC77 1338 aaPredicted RBP29.25■■■□□ 2.27
PTX4-203ENST00000447419 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
PTX4-203ENST00000447419 CLSPNQ9HAW4 1339 aa29.24■■■□□ 2.27
PTX4-203ENST00000447419 DISP3Q9P2K9 1392 aa29.24■■■□□ 2.27
PTX4-203ENST00000447419 PRR36Q9H6K5 1346 aa29.23■■■□□ 2.27
PTX4-203ENST00000447419 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
PTX4-203ENST00000447419 PMFBP1Q8TBY8 1022 aa29.22■■■□□ 2.27
PTX4-203ENST00000447419 NHSL1Q5SYE7 1610 aa29.21■■■□□ 2.27
PTX4-203ENST00000447419 JCADQ9P266 1359 aa29.2■■■□□ 2.27
PTX4-203ENST00000447419 CDK19Q9BWU1 502 aa29.2■■■□□ 2.27
PTX4-203ENST00000447419 RALGAPBQ86X10 1494 aa29.2■■■□□ 2.26
PTX4-203ENST00000447419 PHF8Q9UPP1 1060 aa29.2■■■□□ 2.26
PTX4-203ENST00000447419 MED1Q15648 1581 aaPredicted RBP29.19■■■□□ 2.26
PTX4-203ENST00000447419 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
PTX4-203ENST00000447419 USP32Q8NFA0 1604 aa29.18■■■□□ 2.26
PTX4-203ENST00000447419 RGPD8O14715 1765 aaPredicted RBP29.17■■■□□ 2.26
PTX4-203ENST00000447419 NPHP3Q7Z494 1330 aa29.16■■■□□ 2.26
PTX4-203ENST00000447419 SOS2Q07890 1332 aaPredicted RBP29.16■■■□□ 2.26
PTX4-203ENST00000447419 NUTM2BA6NNL0 878 aaPredicted RBP29.15■■■□□ 2.26
PTX4-203ENST00000447419 NUTM2EB1AL46 878 aaPredicted RBP29.15■■■□□ 2.26
PTX4-203ENST00000447419 NUTM2AQ8IVF1 878 aaPredicted RBP29.15■■■□□ 2.26
PTX4-203ENST00000447419 LRRC59Q96AG4 307 aaKnown RBP29.15■■■□□ 2.26
PTX4-203ENST00000447419 TULP4Q9NRJ4 1543 aa29.14■■■□□ 2.26
PTX4-203ENST00000447419 SRPK2P78362 688 aaKnown RBP29.14■■■□□ 2.25
PTX4-203ENST00000447419 ANKARQ7Z5J8 1434 aa29.14■■■□□ 2.25
PTX4-203ENST00000447419 NUDT16Q96DE0 195 aaKnown RBP29.14■■■□□ 2.25
PTX4-203ENST00000447419 CABP2Q9NPB3 220 aa29.14■■■□□ 2.25
PTX4-203ENST00000447419 QRICH2Q9H0J4 1663 aa29.13■■■□□ 2.25
PTX4-203ENST00000447419 EIF3AQ14152 1382 aaKnown RBP29.12■■■□□ 2.25
PTX4-203ENST00000447419 PLEKHG5O94827 1062 aa29.11■■■□□ 2.25
PTX4-203ENST00000447419 KRT28Q7Z3Y7 464 aa29.1■■■□□ 2.25
PTX4-203ENST00000447419 PXDNQ92626 1479 aa29.1■■■□□ 2.25
PTX4-203ENST00000447419 ATP7BP35670 1465 aa29.1■■■□□ 2.25
PTX4-203ENST00000447419 PHF23Q9BUL5 403 aaPredicted RBP29.1■■■□□ 2.25
PTX4-203ENST00000447419 PNPLA6Q8IY17 1366 aa29.09■■■□□ 2.25
PTX4-203ENST00000447419 PSME1Q06323 249 aa29.08■■■□□ 2.25
PTX4-203ENST00000447419 TIMELESSQ9UNS1 1208 aa29.08■■■□□ 2.25
PTX4-203ENST00000447419 LRP6O75581 1613 aa29.07■■■□□ 2.24
PTX4-203ENST00000447419 KIF1AQ12756 1690 aa29.06■■■□□ 2.24
PTX4-203ENST00000447419 NGDNQ8NEJ9 315 aaKnown RBP29.06■■■□□ 2.24
PTX4-203ENST00000447419 LMOD2Q6P5Q4 547 aa29.04■■■□□ 2.24
PTX4-203ENST00000447419 SPATA31A6Q5VVP1 1343 aa29.04■■■□□ 2.24
PTX4-203ENST00000447419 SHPRHQ149N8 1683 aa29.04■■■□□ 2.24
PTX4-203ENST00000447419 MEX3CQ5U5Q3 659 aaKnown RBP29.04■■■□□ 2.24
PTX4-203ENST00000447419 CCDC61Q9Y6R9 512 aa29.02■■■□□ 2.24
PTX4-203ENST00000447419 EVC2Q86UK5 1308 aa29.02■■■□□ 2.24
PTX4-203ENST00000447419 ST20-MTHFSA0A0A6YYL1 179 aa29.01■■■□□ 2.23
PTX4-203ENST00000447419 ADAMTS2O95450 1211 aa28.99■■■□□ 2.23
PTX4-203ENST00000447419 SPATA31A3Q5VYP0 1347 aa28.99■■■□□ 2.23
PTX4-203ENST00000447419 PPIP5K1Q6PFW1 1433 aa28.98■■■□□ 2.23
PTX4-203ENST00000447419 ACEP12821 1306 aa28.98■■■□□ 2.23
PTX4-203ENST00000447419 PAK3O75914 559 aaPredicted RBP28.98■■■□□ 2.23
PTX4-203ENST00000447419 CABP1Q9NZU7 370 aa28.97■■■□□ 2.23
PTX4-203ENST00000447419 RGS17Q9UGC6 210 aaPredicted RBP28.97■■■□□ 2.23
PTX4-203ENST00000447419 USP47Q96K76 1375 aa28.96■■■□□ 2.23
PTX4-203ENST00000447419 ILDR2Q71H61 639 aa28.96■■■□□ 2.23
PTX4-203ENST00000447419 CABLES1Q8TDN4 633 aa28.94■■■□□ 2.22
PTX4-203ENST00000447419 TNS3Q68CZ2 1445 aa28.94■■■□□ 2.22
PTX4-203ENST00000447419 C8orf37Q96NL8 207 aa28.93■■■□□ 2.22
PTX4-203ENST00000447419 TOPAZ1Q8N9V7 1692 aa28.92■■■□□ 2.22
PTX4-203ENST00000447419 ITSN1Q15811 1721 aa28.92■■■□□ 2.22
PTX4-203ENST00000447419 PLEKHG3A1L390 1219 aa28.91■■■□□ 2.22
PTX4-203ENST00000447419 TESK2Q96S53 571 aa28.91■■■□□ 2.22
PTX4-203ENST00000447419 SBNO1A3KN83 1393 aa28.9■■■□□ 2.22
PTX4-203ENST00000447419 NUTM2GQ5VZR2 741 aa28.89■■■□□ 2.22
PTX4-203ENST00000447419 SBNO2Q9Y2G9 1366 aa28.89■■■□□ 2.22
PTX4-203ENST00000447419 POLR3AO14802 1390 aaPredicted RBP28.88■■■□□ 2.21
PTX4-203ENST00000447419 HAP1P54257 671 aaPredicted RBP28.87■■■□□ 2.21
PTX4-203ENST00000447419 POTEAQ6S8J7 498 aa28.85■■■□□ 2.21
PTX4-203ENST00000447419 TMC1Q8TDI8 760 aa28.85■■■□□ 2.21
PTX4-203ENST00000447419 TRPM3Q9HCF6 1732 aaPredicted RBP28.85■■■□□ 2.21
PTX4-203ENST00000447419 COL22A1Q8NFW1 1626 aaPredicted RBP28.85■■■□□ 2.21
PTX4-203ENST00000447419 NGLY1Q96IV0 654 aa28.84■■■□□ 2.21
PTX4-203ENST00000447419 AFF2P51816 1311 aa28.83■■■□□ 2.21
PTX4-203ENST00000447419 ARHGEF10O15013 1369 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms