RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ZNF775Q96BV0 537 aaPredicted RBP14.23□□□□□ -0.13
SMARCE1-206ENST00000447024 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
SMARCE1-206ENST00000447024 FAM160A2Q8N612 972 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-206ENST00000447024 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
SMARCE1-206ENST00000447024 RPIAP49247 311 aa14.21□□□□□ -0.13
SMARCE1-206ENST00000447024 FOXC1Q12948 553 aa14.21□□□□□ -0.13
SMARCE1-206ENST00000447024 PRDM9Q9NQV7 894 aa14.21□□□□□ -0.13
SMARCE1-206ENST00000447024 HAP1P54257 671 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-206ENST00000447024 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
SMARCE1-206ENST00000447024 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
SMARCE1-206ENST00000447024 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-206ENST00000447024 POTECB2RU33 542 aa14.17□□□□□ -0.14
SMARCE1-206ENST00000447024 BRICD5Q6PL45 260 aa14.17□□□□□ -0.14
SMARCE1-206ENST00000447024 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-206ENST00000447024 ST8SIA5O15466 376 aa14.16□□□□□ -0.14
SMARCE1-206ENST00000447024 RNF19BQ6ZMZ0 732 aa14.16□□□□□ -0.14
SMARCE1-206ENST00000447024 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
SMARCE1-206ENST00000447024 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
SMARCE1-206ENST00000447024 CUX2O14529 1486 aa14.14□□□□□ -0.15
SMARCE1-206ENST00000447024 MSS51Q4VC12 460 aa14.14□□□□□ -0.15
SMARCE1-206ENST00000447024 AAASQ9NRG9 546 aa14.14□□□□□ -0.15
SMARCE1-206ENST00000447024 NESP48681 1621 aa14.14□□□□□ -0.15
SMARCE1-206ENST00000447024 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
SMARCE1-206ENST00000447024 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-206ENST00000447024 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
SMARCE1-206ENST00000447024 TOR4AQ9NXH8 423 aa14.11□□□□□ -0.15
SMARCE1-206ENST00000447024 CD46P15529 392 aa14.1□□□□□ -0.15
SMARCE1-206ENST00000447024 MAP2K5Q13163 448 aa14.1□□□□□ -0.15
SMARCE1-206ENST00000447024 CYP4X1Q8N118 509 aa14.07□□□□□ -0.16
SMARCE1-206ENST00000447024 ZBTB24O43167 697 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-206ENST00000447024 Q3C1V9 767 aa14.06□□□□□ -0.16
SMARCE1-206ENST00000447024 CRIPAKQ8N1N5 446 aa14.06□□□□□ -0.16
SMARCE1-206ENST00000447024 CFTRP13569 1480 aa14.05□□□□□ -0.16
SMARCE1-206ENST00000447024 AVPP01185 164 aa14.04□□□□□ -0.16
SMARCE1-206ENST00000447024 IRF6O14896 467 aa14.03□□□□□ -0.16
SMARCE1-206ENST00000447024 KDM4AO75164 1064 aa14.03□□□□□ -0.16
SMARCE1-206ENST00000447024 MMP16P51512 607 aa14.03□□□□□ -0.16
SMARCE1-206ENST00000447024 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-206ENST00000447024 DACH1Q9UI36 760 aa14.02□□□□□ -0.17
SMARCE1-206ENST00000447024 HLA-CQ95604 372 aa14□□□□□ -0.17
SMARCE1-206ENST00000447024 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-206ENST00000447024 TRIM32Q13049 653 aa13.99□□□□□ -0.17
SMARCE1-206ENST00000447024 USB1Q9BQ65 265 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-206ENST00000447024 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-206ENST00000447024 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
SMARCE1-206ENST00000447024 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-206ENST00000447024 WNT7AO00755 349 aa13.98□□□□□ -0.17
SMARCE1-206ENST00000447024 AXIN1O15169 862 aa13.98□□□□□ -0.17
SMARCE1-206ENST00000447024 TTC24A2A3L6 582 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-206ENST00000447024 DXOO77932 396 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-206ENST00000447024 CTC1Q2NKJ3 1217 aa13.97□□□□□ -0.17
SMARCE1-206ENST00000447024 CCDC88BA6NC98 1476 aa13.97□□□□□ -0.17
SMARCE1-206ENST00000447024 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
SMARCE1-206ENST00000447024 USP46P62068 366 aa13.96□□□□□ -0.17
SMARCE1-206ENST00000447024 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
SMARCE1-206ENST00000447024 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
SMARCE1-206ENST00000447024 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
SMARCE1-206ENST00000447024 HOXA2O43364 376 aa13.95□□□□□ -0.18
SMARCE1-206ENST00000447024 SMCPP49901 116 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-206ENST00000447024 GMPR2Q9P2T1 348 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-206ENST00000447024 SNIP1Q8TAD8 396 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-206ENST00000447024 MRGPRX2Q96LB1 330 aa13.92□□□□□ -0.18
SMARCE1-206ENST00000447024 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
SMARCE1-206ENST00000447024 SMPD1P17405 629 aa13.91□□□□□ -0.18
SMARCE1-206ENST00000447024 GUCA2AQ02747 115 aa13.91□□□□□ -0.18
SMARCE1-206ENST00000447024 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
SMARCE1-206ENST00000447024 WDR62O43379 1518 aa13.9□□□□□ -0.18
SMARCE1-206ENST00000447024 TREML4Q6UXN2 200 aa13.9□□□□□ -0.18
SMARCE1-206ENST00000447024 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
SMARCE1-206ENST00000447024 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
SMARCE1-206ENST00000447024 LCE2AQ5TA79 106 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-206ENST00000447024 FAM217BQ9NTX9 383 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-206ENST00000447024 CLCN1P35523 988 aa13.88□□□□□ -0.19
SMARCE1-206ENST00000447024 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-206ENST00000447024 J3QL48 77 aa13.87□□□□□ -0.19
SMARCE1-206ENST00000447024 SYMPKQ92797 1274 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-206ENST00000447024 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-206ENST00000447024 JUNDP17535 347 aa13.85□□□□□ -0.19
SMARCE1-206ENST00000447024 SKOR1P84550 965 aa13.85□□□□□ -0.19
SMARCE1-206ENST00000447024 WNT7BP56706 349 aa13.82□□□□□ -0.2
SMARCE1-206ENST00000447024 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-206ENST00000447024 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
SMARCE1-206ENST00000447024 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
SMARCE1-206ENST00000447024 ATP13A2Q9NQ11 1180 aa13.81□□□□□ -0.2
SMARCE1-206ENST00000447024 RETREG3Q86VR2 466 aa13.8□□□□□ -0.2
SMARCE1-206ENST00000447024 HPS1Q92902 700 aa13.8□□□□□ -0.2
SMARCE1-206ENST00000447024 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-206ENST00000447024 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-206ENST00000447024 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-206ENST00000447024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMARCE1-206ENST00000447024 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
SMARCE1-206ENST00000447024 WFS1O76024 890 aa13.76□□□□□ -0.21
SMARCE1-206ENST00000447024 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
SMARCE1-206ENST00000447024 FDX1P10109 184 aa13.75□□□□□ -0.21
SMARCE1-206ENST00000447024 PTCRAQ6ISU1 281 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-206ENST00000447024 SNRPBP14678 240 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-206ENST00000447024 NFX1Q12986 1120 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-206ENST00000447024 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
SMARCE1-206ENST00000447024 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
SMARCE1-206ENST00000447024 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms