RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
HMGB2-203ENST00000446922 ZNF772Q68DY9 489 aaPredicted RBP22.86■■□□□ 1.25
HMGB2-203ENST00000446922 TMEM132EQ6IEE7 984 aa22.86■■□□□ 1.25
HMGB2-203ENST00000446922 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
HMGB2-203ENST00000446922 KNDC1Q76NI1 1749 aa22.85■■□□□ 1.25
HMGB2-203ENST00000446922 ORAI2Q96SN7 254 aa22.85■■□□□ 1.25
HMGB2-203ENST00000446922 SOS2Q07890 1332 aaPredicted RBP22.84■■□□□ 1.25
HMGB2-203ENST00000446922 LRP6O75581 1613 aa22.84■■□□□ 1.25
HMGB2-203ENST00000446922 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
HMGB2-203ENST00000446922 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
HMGB2-203ENST00000446922 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
HMGB2-203ENST00000446922 DDX17Q92841 729 aaKnown RBP22.8■■□□□ 1.24
HMGB2-203ENST00000446922 NPHP3Q7Z494 1330 aa22.8■■□□□ 1.24
HMGB2-203ENST00000446922 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
HMGB2-203ENST00000446922 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
HMGB2-203ENST00000446922 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
HMGB2-203ENST00000446922 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
HMGB2-203ENST00000446922 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
HMGB2-203ENST00000446922 PLEKHH1Q9ULM0 1364 aa22.75■■□□□ 1.23
HMGB2-203ENST00000446922 DLC1Q96QB1 1528 aa22.74■■□□□ 1.23
HMGB2-203ENST00000446922 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
HMGB2-203ENST00000446922 FOXO3O43524 673 aa22.7■■□□□ 1.22
HMGB2-203ENST00000446922 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
HMGB2-203ENST00000446922 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
HMGB2-203ENST00000446922 AFF2P51816 1311 aa22.7■■□□□ 1.22
HMGB2-203ENST00000446922 ADGRB1O14514 1584 aa22.69■■□□□ 1.22
HMGB2-203ENST00000446922 RXRBP28702 533 aa22.69■■□□□ 1.22
HMGB2-203ENST00000446922 POGKQ9P215 609 aa22.69■■□□□ 1.22
HMGB2-203ENST00000446922 PXDNQ92626 1479 aa22.68■■□□□ 1.22
HMGB2-203ENST00000446922 COL22A1Q8NFW1 1626 aaPredicted RBP22.68■■□□□ 1.22
HMGB2-203ENST00000446922 CDK12Q9NYV4 1490 aaPredicted RBP22.67■■□□□ 1.22
HMGB2-203ENST00000446922 KIF1AQ12756 1690 aa22.66■■□□□ 1.22
HMGB2-203ENST00000446922 NUTM2FA1L443 756 aa22.66■■□□□ 1.22
HMGB2-203ENST00000446922 NGLY1Q96IV0 654 aa22.66■■□□□ 1.22
HMGB2-203ENST00000446922 C8orf37Q96NL8 207 aa22.66■■□□□ 1.22
HMGB2-203ENST00000446922 PSME1Q06323 249 aa22.64■■□□□ 1.21
HMGB2-203ENST00000446922 QTRT2Q9H974 415 aaKnown RBP22.64■■□□□ 1.21
HMGB2-203ENST00000446922 PHF8Q9UPP1 1060 aa22.64■■□□□ 1.21
HMGB2-203ENST00000446922 ANKARQ7Z5J8 1434 aa22.64■■□□□ 1.21
HMGB2-203ENST00000446922 FNBP4Q8N3X1 1017 aaPredicted RBP22.63■■□□□ 1.21
HMGB2-203ENST00000446922 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
HMGB2-203ENST00000446922 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
HMGB2-203ENST00000446922 SPATA31A3Q5VYP0 1347 aa22.62■■□□□ 1.21
HMGB2-203ENST00000446922 ADAMTS2O95450 1211 aa22.62■■□□□ 1.21
HMGB2-203ENST00000446922 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
HMGB2-203ENST00000446922 KRT28Q7Z3Y7 464 aa22.62■■□□□ 1.21
HMGB2-203ENST00000446922 ADGRB2O60241 1585 aa22.62■■□□□ 1.21
HMGB2-203ENST00000446922 SAFB2Q14151 953 aaKnown RBP eCLIP22.6■■□□□ 1.21
HMGB2-203ENST00000446922 XPCQ01831 940 aaPredicted RBP22.58■■□□□ 1.21
HMGB2-203ENST00000446922 USP21Q9UK80 565 aa22.57■■□□□ 1.2
HMGB2-203ENST00000446922 SBNO1A3KN83 1393 aa22.57■■□□□ 1.2
HMGB2-203ENST00000446922 WASLO00401 505 aaPredicted RBP22.56■■□□□ 1.2
HMGB2-203ENST00000446922 TRPC5Q9UL62 973 aaPredicted RBP22.56■■□□□ 1.2
HMGB2-203ENST00000446922 KIAA1210Q9ULL0 1709 aa22.55■■□□□ 1.2
HMGB2-203ENST00000446922 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
HMGB2-203ENST00000446922 MINK1Q8N4C8 1332 aaPredicted RBP22.53■■□□□ 1.2
HMGB2-203ENST00000446922 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
HMGB2-203ENST00000446922 TNS3Q68CZ2 1445 aa22.52■■□□□ 1.2
HMGB2-203ENST00000446922 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.19
HMGB2-203ENST00000446922 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
HMGB2-203ENST00000446922 MARF1Q9Y4F3 1742 aaKnown RBP22.51■■□□□ 1.19
HMGB2-203ENST00000446922 USP32Q8NFA0 1604 aa22.5■■□□□ 1.19
HMGB2-203ENST00000446922 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
HMGB2-203ENST00000446922 ATRNO75882 1429 aa22.49■■□□□ 1.19
HMGB2-203ENST00000446922 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
HMGB2-203ENST00000446922 GPRASP1Q5JY77 1395 aa22.49■■□□□ 1.19
HMGB2-203ENST00000446922 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
HMGB2-203ENST00000446922 ARHGEF28Q8N1W1 1705 aaKnown RBP22.48■■□□□ 1.19
HMGB2-203ENST00000446922 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
HMGB2-203ENST00000446922 RGS12O14924 1447 aa22.46■■□□□ 1.19
HMGB2-203ENST00000446922 SLIT2O94813 1529 aa22.44■■□□□ 1.18
HMGB2-203ENST00000446922 HAP1P54257 671 aaPredicted RBP22.44■■□□□ 1.18
HMGB2-203ENST00000446922 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
HMGB2-203ENST00000446922 NUDT16Q96DE0 195 aaKnown RBP22.44■■□□□ 1.18
HMGB2-203ENST00000446922 NBPF1Q3BBV0 1214 aa22.43■■□□□ 1.18
HMGB2-203ENST00000446922 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
HMGB2-203ENST00000446922 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
HMGB2-203ENST00000446922 GJD4Q96KN9 370 aaPredicted RBP22.43■■□□□ 1.18
HMGB2-203ENST00000446922 CDK19Q9BWU1 502 aa22.42■■□□□ 1.18
HMGB2-203ENST00000446922 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.42■■□□□ 1.18
HMGB2-203ENST00000446922 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
HMGB2-203ENST00000446922 CCDC61Q9Y6R9 512 aa22.41■■□□□ 1.18
HMGB2-203ENST00000446922 ATP7BP35670 1465 aa22.4■■□□□ 1.18
HMGB2-203ENST00000446922 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
HMGB2-203ENST00000446922 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
HMGB2-203ENST00000446922 CABLES1Q8TDN4 633 aa22.39■■□□□ 1.17
HMGB2-203ENST00000446922 PLEKHG3A1L390 1219 aa22.38■■□□□ 1.17
HMGB2-203ENST00000446922 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
HMGB2-203ENST00000446922 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
HMGB2-203ENST00000446922 SIN3AQ96ST3 1273 aa22.37■■□□□ 1.17
HMGB2-203ENST00000446922 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
HMGB2-203ENST00000446922 POLR3AO14802 1390 aaPredicted RBP22.36■■□□□ 1.17
HMGB2-203ENST00000446922 VPS72Q15906 364 aa22.35■■□□□ 1.17
HMGB2-203ENST00000446922 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
HMGB2-203ENST00000446922 FAM83GA6ND36 823 aa22.33■■□□□ 1.17
HMGB2-203ENST00000446922 PAK3O75914 559 aaPredicted RBP22.33■■□□□ 1.17
HMGB2-203ENST00000446922 NBPF8Q3BBV2 869 aa22.33■■□□□ 1.17
HMGB2-203ENST00000446922 ABCA3Q99758 1704 aa22.33■■□□□ 1.17
HMGB2-203ENST00000446922 ONECUT3O60422 494 aaPredicted RBP22.32■■□□□ 1.16
HMGB2-203ENST00000446922 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms