RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.89
SMG1-202ENST00000446231 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.89
SMG1-202ENST00000446231 CCDC27Q2M243 656 aa9.46□□□□□ -0.89
SMG1-202ENST00000446231 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.89
SMG1-202ENST00000446231 NOL10Q9BSC4 688 aaKnown RBP9.46□□□□□ -0.9
SMG1-202ENST00000446231 ZKSCAN1P17029 563 aaPredicted RBP9.46□□□□□ -0.9
SMG1-202ENST00000446231 TAF7LQ5H9L4 462 aa9.46□□□□□ -0.9
SMG1-202ENST00000446231 KIF18AQ8NI77 898 aa9.46□□□□□ -0.9
SMG1-202ENST00000446231 IGHDP01880 384 aa9.46□□□□□ -0.9
SMG1-202ENST00000446231 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.9
SMG1-202ENST00000446231 GTF2A1P52655 376 aaPredicted RBP9.46□□□□□ -0.9
SMG1-202ENST00000446231 SLC4A10Q6U841 1118 aa9.46□□□□□ -0.9
SMG1-202ENST00000446231 KIF2AO00139 706 aaPredicted RBP9.45□□□□□ -0.9
SMG1-202ENST00000446231 STK31Q9BXU1 1019 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 RDXP35241 583 aaKnown RBP9.45□□□□□ -0.9
SMG1-202ENST00000446231 BICD2Q8TD16 824 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 OGFRQ9NZT2 677 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMG1-202ENST00000446231 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 RNF123Q5XPI4 1314 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 FSD2A1L4K1 749 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 RBM25P49756 843 aaKnown RBP9.45□□□□□ -0.9
SMG1-202ENST00000446231 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 CHMP4CQ96CF2 233 aa9.45□□□□□ -0.9
SMG1-202ENST00000446231 ERC2O15083 957 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 RIPK4P57078 832 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 ADCY5O95622 1261 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 FEZ1Q99689 392 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 KLHL40Q2TBA0 621 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 DHX8Q14562 1220 aaKnown RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 CHD1LQ86WJ1 897 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 ZKSCAN5Q9Y2L8 839 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 ELL2O00472 640 aaPredicted RBP9.44□□□□□ -0.9
SMG1-202ENST00000446231 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
SMG1-202ENST00000446231 FHOD3Q2V2M9 1422 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 ZNF830Q96NB3 372 aaPredicted RBP9.43□□□□□ -0.9
SMG1-202ENST00000446231 UBXN4Q92575 508 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 SNX21Q969T3 373 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 HDGFL2Q7Z4V5 671 aaPredicted RBP9.43□□□□□ -0.9
SMG1-202ENST00000446231 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMG1-202ENST00000446231 RUFY2Q8WXA3 655 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 PAXBP1Q9Y5B6 917 aa9.43□□□□□ -0.9
SMG1-202ENST00000446231 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
SMG1-202ENST00000446231 PDCP20941 246 aa9.42□□□□□ -0.9
SMG1-202ENST00000446231 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
SMG1-202ENST00000446231 RAB3GAP1Q15042 981 aa9.42□□□□□ -0.9
SMG1-202ENST00000446231 PDILTQ8N807 584 aa9.42□□□□□ -0.9
SMG1-202ENST00000446231 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
SMG1-202ENST00000446231 PTPN14Q15678 1187 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 VGLL3A8MV65 326 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMG1-202ENST00000446231 SMC5Q8IY18 1101 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 HDAC5Q9UQL6 1122 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 SEC24BO95487 1268 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 TXLNBQ8N3L3 684 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 GPATCH11Q8N954 259 aa9.41□□□□□ -0.9
SMG1-202ENST00000446231 IGSF3O75054 1194 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 TMCO3Q6UWJ1 677 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 STK26Q9P289 416 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 USP8P40818 1118 aa9.4□□□□□ -0.9
SMG1-202ENST00000446231 RARSP54136 660 aaKnown RBP9.4□□□□□ -0.91
SMG1-202ENST00000446231 KINO60870 393 aaKnown RBP9.4□□□□□ -0.91
SMG1-202ENST00000446231 H0YHG0 523 aa9.4□□□□□ -0.91
SMG1-202ENST00000446231 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
SMG1-202ENST00000446231 NEMFO60524 1076 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 DMTNQ08495 405 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 MAP3K11Q16584 847 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 HSP90AB3PQ58FF7 597 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 TNNT1P13805 278 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 IPO4Q8TEX9 1081 aaKnown RBP9.39□□□□□ -0.91
SMG1-202ENST00000446231 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 FAM107BQ9H098 131 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 SKIDA1Q1XH10 827 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 OLFM4Q6UX06 510 aa9.39□□□□□ -0.91
SMG1-202ENST00000446231 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 IGF1RP08069 1367 aa9.38□□□□□ -0.91
SMG1-202ENST00000446231 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
SMG1-202ENST00000446231 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
SMG1-202ENST00000446231 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
SMG1-202ENST00000446231 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
SMG1-202ENST00000446231 ZFP91Q96JP5 570 aaPredicted RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 C16orf45Q96MC5 204 aaPredicted RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
SMG1-202ENST00000446231 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms