RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 CDC42BPGQ6DT37 1551 aa22.6■■□□□ 1.21
UBE2F-216ENST00000445676 PXDNQ92626 1479 aa22.59■■□□□ 1.21
UBE2F-216ENST00000445676 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
UBE2F-216ENST00000445676 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.58■■□□□ 1.21
UBE2F-216ENST00000445676 BCL9LQ86UU0 1499 aa22.58■■□□□ 1.2
UBE2F-216ENST00000445676 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
UBE2F-216ENST00000445676 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
UBE2F-216ENST00000445676 NAIPQ13075 1403 aa22.53■■□□□ 1.2
UBE2F-216ENST00000445676 NPHP3Q7Z494 1330 aa22.53■■□□□ 1.2
UBE2F-216ENST00000445676 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
UBE2F-216ENST00000445676 GLI3P10071 1580 aa22.5■■□□□ 1.19
UBE2F-216ENST00000445676 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
UBE2F-216ENST00000445676 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
UBE2F-216ENST00000445676 ESCO1Q5FWF5 840 aa22.49■■□□□ 1.19
UBE2F-216ENST00000445676 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
UBE2F-216ENST00000445676 FOXD1Q16676 465 aa22.48■■□□□ 1.19
UBE2F-216ENST00000445676 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
UBE2F-216ENST00000445676 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
UBE2F-216ENST00000445676 KNDC1Q76NI1 1749 aa22.47■■□□□ 1.19
UBE2F-216ENST00000445676 FMN2Q9NZ56 1722 aa22.46■■□□□ 1.19
UBE2F-216ENST00000445676 FOXO3O43524 673 aa22.46■■□□□ 1.19
UBE2F-216ENST00000445676 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
UBE2F-216ENST00000445676 SLIT2O94813 1529 aa22.46■■□□□ 1.19
UBE2F-216ENST00000445676 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
UBE2F-216ENST00000445676 IFT172Q9UG01 1749 aa22.45■■□□□ 1.19
UBE2F-216ENST00000445676 TECPR2O15040 1411 aa22.44■■□□□ 1.18
UBE2F-216ENST00000445676 KIF1AQ12756 1690 aa22.44■■□□□ 1.18
UBE2F-216ENST00000445676 RRBP1Q9P2E9 1410 aaKnown RBP22.44■■□□□ 1.18
UBE2F-216ENST00000445676 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
UBE2F-216ENST00000445676 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
UBE2F-216ENST00000445676 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
UBE2F-216ENST00000445676 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
UBE2F-216ENST00000445676 PLCH1Q4KWH8 1693 aa22.4■■□□□ 1.18
UBE2F-216ENST00000445676 UNC5CLQ8IV45 518 aa22.4■■□□□ 1.18
UBE2F-216ENST00000445676 ABCA3Q99758 1704 aa22.4■■□□□ 1.18
UBE2F-216ENST00000445676 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.18
UBE2F-216ENST00000445676 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
UBE2F-216ENST00000445676 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
UBE2F-216ENST00000445676 SPATA31A3Q5VYP0 1347 aa22.38■■□□□ 1.17
UBE2F-216ENST00000445676 NWD2Q9ULI1 1742 aa22.38■■□□□ 1.17
UBE2F-216ENST00000445676 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
UBE2F-216ENST00000445676 LRP5O75197 1615 aa22.37■■□□□ 1.17
UBE2F-216ENST00000445676 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
UBE2F-216ENST00000445676 STK26Q9P289 416 aa22.36■■□□□ 1.17
UBE2F-216ENST00000445676 DEFB132Q7Z7B7 95 aa22.35■■□□□ 1.17
UBE2F-216ENST00000445676 ABCC11Q96J66 1382 aa22.34■■□□□ 1.17
UBE2F-216ENST00000445676 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
UBE2F-216ENST00000445676 TNS3Q68CZ2 1445 aa22.32■■□□□ 1.16
UBE2F-216ENST00000445676 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
UBE2F-216ENST00000445676 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
UBE2F-216ENST00000445676 SEPT12Q8IYM1 358 aa22.3■■□□□ 1.16
UBE2F-216ENST00000445676 YTHDC2Q9H6S0 1430 aaKnown RBP22.3■■□□□ 1.16
UBE2F-216ENST00000445676 NRAPQ86VF7 1730 aa22.29■■□□□ 1.16
UBE2F-216ENST00000445676 ANKRD30BQ9BXX2 1392 aa22.29■■□□□ 1.16
UBE2F-216ENST00000445676 KRT28Q7Z3Y7 464 aa22.29■■□□□ 1.16
UBE2F-216ENST00000445676 VPS72Q15906 364 aa22.28■■□□□ 1.16
UBE2F-216ENST00000445676 RGL3Q3MIN7 710 aa22.28■■□□□ 1.16
UBE2F-216ENST00000445676 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
UBE2F-216ENST00000445676 NRXN1Q9ULB1 1477 aa22.26■■□□□ 1.15
UBE2F-216ENST00000445676 SF3B2Q13435 895 aaKnown RBP22.25■■□□□ 1.15
UBE2F-216ENST00000445676 ONECUT3O60422 494 aaPredicted RBP22.24■■□□□ 1.15
UBE2F-216ENST00000445676 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
UBE2F-216ENST00000445676 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
UBE2F-216ENST00000445676 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
UBE2F-216ENST00000445676 TRPM3Q9HCF6 1732 aaPredicted RBP22.23■■□□□ 1.15
UBE2F-216ENST00000445676 PLEKHG5O94827 1062 aa22.22■■□□□ 1.15
UBE2F-216ENST00000445676 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
UBE2F-216ENST00000445676 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
UBE2F-216ENST00000445676 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
UBE2F-216ENST00000445676 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
UBE2F-216ENST00000445676 PSME1Q06323 249 aa22.19■■□□□ 1.14
UBE2F-216ENST00000445676 SIRT1Q96EB6 747 aa22.19■■□□□ 1.14
UBE2F-216ENST00000445676 ALS2Q96Q42 1657 aa22.19■■□□□ 1.14
UBE2F-216ENST00000445676 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
UBE2F-216ENST00000445676 COL14A1Q05707 1796 aaKnown RBP22.17■■□□□ 1.14
UBE2F-216ENST00000445676 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
UBE2F-216ENST00000445676 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
UBE2F-216ENST00000445676 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
UBE2F-216ENST00000445676 CRYBG1Q9Y4K1 1723 aa22.17■■□□□ 1.14
UBE2F-216ENST00000445676 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
UBE2F-216ENST00000445676 HRCP23327 699 aa22.15■■□□□ 1.14
UBE2F-216ENST00000445676 BAG6P46379 1132 aa22.15■■□□□ 1.14
UBE2F-216ENST00000445676 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
UBE2F-216ENST00000445676 A0A0G2JS52 829 aa22.14■■□□□ 1.13
UBE2F-216ENST00000445676 MYT1Q01538 1121 aa22.14■■□□□ 1.13
UBE2F-216ENST00000445676 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.13
UBE2F-216ENST00000445676 THSD7AQ9UPZ6 1657 aa22.14■■□□□ 1.13
UBE2F-216ENST00000445676 DLC1Q96QB1 1528 aa22.13■■□□□ 1.13
UBE2F-216ENST00000445676 SAFB2Q14151 953 aaKnown RBP eCLIP22.13■■□□□ 1.13
UBE2F-216ENST00000445676 FAM98CQ17RN3 349 aaKnown RBP22.13■■□□□ 1.13
UBE2F-216ENST00000445676 MPHOSPH9Q99550 1183 aa22.13■■□□□ 1.13
UBE2F-216ENST00000445676 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
UBE2F-216ENST00000445676 CFAP70Q5T0N1 1121 aa22.12■■□□□ 1.13
UBE2F-216ENST00000445676 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
UBE2F-216ENST00000445676 PMFBP1Q8TBY8 1022 aa22.11■■□□□ 1.13
UBE2F-216ENST00000445676 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
UBE2F-216ENST00000445676 DISP2A7MBM2 1401 aa22.08■■□□□ 1.13
UBE2F-216ENST00000445676 EN1Q05925 392 aaPredicted RBP22.08■■□□□ 1.13
UBE2F-216ENST00000445676 FAM182BQ5T319 152 aa22.07■■□□□ 1.12
UBE2F-216ENST00000445676 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms