RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
SHANK3-203ENST00000445220 CPLX2Q6PUV4 134 aaKnown RBP22.52■■□□□ 1.2
SHANK3-203ENST00000445220 CCDC73Q6ZRK6 1079 aa22.52■■□□□ 1.2
SHANK3-203ENST00000445220 API5Q9BZZ5 524 aaKnown RBP22.51■■□□□ 1.19
SHANK3-203ENST00000445220 HOOK1Q9UJC3 728 aaKnown RBP22.51■■□□□ 1.19
SHANK3-203ENST00000445220 LNPKQ9C0E8 428 aa22.51■■□□□ 1.19
SHANK3-203ENST00000445220 H0YHG0 523 aa22.51■■□□□ 1.19
SHANK3-203ENST00000445220 LTV1Q96GA3 475 aaPredicted RBP22.51■■□□□ 1.19
SHANK3-203ENST00000445220 MINK1Q8N4C8 1332 aaPredicted RBP22.51■■□□□ 1.19
SHANK3-203ENST00000445220 TOMM22Q9NS69 142 aa22.51■■□□□ 1.19
SHANK3-203ENST00000445220 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
SHANK3-203ENST00000445220 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
SHANK3-203ENST00000445220 ERCC4Q92889 916 aaPredicted RBP22.5■■□□□ 1.19
SHANK3-203ENST00000445220 EFCAB5A4FU69 1503 aa22.5■■□□□ 1.19
SHANK3-203ENST00000445220 CDC45O75419 566 aa22.5■■□□□ 1.19
SHANK3-203ENST00000445220 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.5■■□□□ 1.19
SHANK3-203ENST00000445220 UQCRHLA0A096LP55 91 aa22.49■■□□□ 1.19
SHANK3-203ENST00000445220 UQCRHP07919 91 aa22.49■■□□□ 1.19
SHANK3-203ENST00000445220 NUTM2FA1L443 756 aa22.49■■□□□ 1.19
SHANK3-203ENST00000445220 RDXP35241 583 aaKnown RBP22.49■■□□□ 1.19
SHANK3-203ENST00000445220 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
SHANK3-203ENST00000445220 NAT10Q9H0A0 1025 aaKnown RBP22.48■■□□□ 1.19
SHANK3-203ENST00000445220 RNF20Q5VTR2 975 aa22.47■■□□□ 1.19
SHANK3-203ENST00000445220 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
SHANK3-203ENST00000445220 LEKR1Q6ZMV7 388 aa22.47■■□□□ 1.19
SHANK3-203ENST00000445220 TRIM5Q9C035 493 aa22.47■■□□□ 1.19
SHANK3-203ENST00000445220 ROCK1Q13464 1354 aa22.46■■□□□ 1.19
SHANK3-203ENST00000445220 RRP12Q5JTH9 1297 aaKnown RBP22.46■■□□□ 1.19
SHANK3-203ENST00000445220 TAF3Q5VWG9 929 aa22.46■■□□□ 1.19
SHANK3-203ENST00000445220 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
SHANK3-203ENST00000445220 RUNDC1Q96C34 613 aa22.45■■□□□ 1.19
SHANK3-203ENST00000445220 PRPF40AO75400 957 aaKnown RBP22.45■■□□□ 1.18
SHANK3-203ENST00000445220 AKAP17AQ02040 695 aaKnown RBP22.45■■□□□ 1.18
SHANK3-203ENST00000445220 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
SHANK3-203ENST00000445220 PCMTD1Q96MG8 357 aaPredicted RBP22.44■■□□□ 1.18
SHANK3-203ENST00000445220 BCL11BQ9C0K0 894 aaPredicted RBP22.44■■□□□ 1.18
SHANK3-203ENST00000445220 TRIM29Q14134 588 aa22.44■■□□□ 1.18
SHANK3-203ENST00000445220 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
SHANK3-203ENST00000445220 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
SHANK3-203ENST00000445220 BRD4O60885 1362 aaPredicted RBP22.43■■□□□ 1.18
SHANK3-203ENST00000445220 TEFQ10587 303 aa22.43■■□□□ 1.18
SHANK3-203ENST00000445220 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 SYNJ2O15056 1496 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 CCP110O43303 1012 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 SYNE3Q6ZMZ3 975 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 CCDC191Q8NCU4 936 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 CPLX1O14810 134 aa22.42■■□□□ 1.18
SHANK3-203ENST00000445220 MARCH6O60337 910 aa22.41■■□□□ 1.18
SHANK3-203ENST00000445220 TMX4Q9H1E5 349 aaPredicted RBP22.41■■□□□ 1.18
SHANK3-203ENST00000445220 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.41■■□□□ 1.18
SHANK3-203ENST00000445220 MSH5O43196 834 aa22.41■■□□□ 1.18
SHANK3-203ENST00000445220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.4■■□□□ 1.18
SHANK3-203ENST00000445220 DCTN1Q14203 1278 aa22.4■■□□□ 1.18
SHANK3-203ENST00000445220 RABEP1Q15276 862 aa22.4■■□□□ 1.18
SHANK3-203ENST00000445220 CCDC47Q96A33 483 aaKnown RBP22.4■■□□□ 1.18
SHANK3-203ENST00000445220 LRRFIP1Q32MZ4 808 aaKnown RBP22.4■■□□□ 1.18
SHANK3-203ENST00000445220 CCDC112Q8NEF3 446 aa22.4■■□□□ 1.18
SHANK3-203ENST00000445220 UBE2Q2Q8WVN8 375 aa22.4■■□□□ 1.18
SHANK3-203ENST00000445220 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.18
SHANK3-203ENST00000445220 HFM1A2PYH4 1435 aa22.39■■□□□ 1.18
SHANK3-203ENST00000445220 MCM2P49736 904 aa22.39■■□□□ 1.18
SHANK3-203ENST00000445220 RIPK4P57078 832 aa22.39■■□□□ 1.18
SHANK3-203ENST00000445220 FBXW7Q969H0 707 aa22.39■■□□□ 1.18
SHANK3-203ENST00000445220 MCM4P33991 863 aa22.39■■□□□ 1.17
SHANK3-203ENST00000445220 ZSCAN30Q86W11 494 aa22.39■■□□□ 1.17
SHANK3-203ENST00000445220 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
SHANK3-203ENST00000445220 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
SHANK3-203ENST00000445220 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
SHANK3-203ENST00000445220 WASHC2AQ641Q2 1341 aa22.36■■□□□ 1.17
SHANK3-203ENST00000445220 IFIT2P09913 472 aaKnown RBP22.36■■□□□ 1.17
SHANK3-203ENST00000445220 SDF4Q9BRK5 362 aa22.36■■□□□ 1.17
SHANK3-203ENST00000445220 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
SHANK3-203ENST00000445220 GNAI1P63096 354 aa22.36■■□□□ 1.17
SHANK3-203ENST00000445220 CWC22Q9HCG8 908 aaKnown RBP22.36■■□□□ 1.17
SHANK3-203ENST00000445220 NEXNQ0ZGT2 675 aa22.35■■□□□ 1.17
SHANK3-203ENST00000445220 CIZ1Q9ULV3 898 aaPredicted RBP22.35■■□□□ 1.17
SHANK3-203ENST00000445220 OLFM4Q6UX06 510 aa22.34■■□□□ 1.17
SHANK3-203ENST00000445220 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
SHANK3-203ENST00000445220 DHX8Q14562 1220 aaKnown RBP22.34■■□□□ 1.17
SHANK3-203ENST00000445220 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
SHANK3-203ENST00000445220 PDILTQ8N807 584 aa22.33■■□□□ 1.17
SHANK3-203ENST00000445220 PDCL2Q8N4E4 241 aa22.33■■□□□ 1.16
SHANK3-203ENST00000445220 PDCL3Q9H2J4 239 aa22.33■■□□□ 1.16
SHANK3-203ENST00000445220 PDE3AQ14432 1141 aa22.32■■□□□ 1.16
SHANK3-203ENST00000445220 CDCA7LQ96GN5 454 aa22.32■■□□□ 1.16
SHANK3-203ENST00000445220 TSPYL1Q9H0U9 437 aa22.32■■□□□ 1.16
SHANK3-203ENST00000445220 SPC24Q8NBT2 197 aa22.32■■□□□ 1.16
SHANK3-203ENST00000445220 AKNAQ7Z591 1439 aa22.32■■□□□ 1.16
SHANK3-203ENST00000445220 CAGE1Q8TC20 777 aa22.31■■□□□ 1.16
SHANK3-203ENST00000445220 NEK4P51957 841 aa22.3■■□□□ 1.16
SHANK3-203ENST00000445220 TTC5Q8N0Z6 440 aa22.3■■□□□ 1.16
SHANK3-203ENST00000445220 ERC2O15083 957 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 CCDC192P0DO97 292 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 HSP90AB4PQ58FF6 505 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 POGZQ7Z3K3 1410 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 KINO60870 393 aaKnown RBP22.29■■□□□ 1.16
SHANK3-203ENST00000445220 SMC2O95347 1197 aa22.29■■□□□ 1.16
SHANK3-203ENST00000445220 PDCP20941 246 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms