RNA–Protein interactions for RNA: ENST00000445177.5

SIK3-204, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 5

Gene SIK3, Length 6,331 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-204ENST00000445177 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
SIK3-204ENST00000445177 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
SIK3-204ENST00000445177 ATP10BO94823 1461 aa16.44■□□□□ 0.22
SIK3-204ENST00000445177 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
SIK3-204ENST00000445177 FBLN1P23142 703 aa16.44■□□□□ 0.22
SIK3-204ENST00000445177 ATF3P18847 181 aa16.43■□□□□ 0.22
SIK3-204ENST00000445177 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
SIK3-204ENST00000445177 GNAI1P63096 354 aa16.43■□□□□ 0.22
SIK3-204ENST00000445177 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
SIK3-204ENST00000445177 GPATCH3Q96I76 525 aa16.42■□□□□ 0.22
SIK3-204ENST00000445177 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
SIK3-204ENST00000445177 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
SIK3-204ENST00000445177 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
SIK3-204ENST00000445177 FANCAO15360 1455 aa16.41■□□□□ 0.22
SIK3-204ENST00000445177 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
SIK3-204ENST00000445177 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
SIK3-204ENST00000445177 IDI1Q13907 227 aa16.4■□□□□ 0.22
SIK3-204ENST00000445177 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
SIK3-204ENST00000445177 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
SIK3-204ENST00000445177 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
SIK3-204ENST00000445177 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
SIK3-204ENST00000445177 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
SIK3-204ENST00000445177 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
SIK3-204ENST00000445177 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
SIK3-204ENST00000445177 SYCP2Q9BX26 1530 aa16.37■□□□□ 0.21
SIK3-204ENST00000445177 NOS1P29475 1434 aa16.37■□□□□ 0.21
SIK3-204ENST00000445177 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
SIK3-204ENST00000445177 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
SIK3-204ENST00000445177 DRC7Q8IY82 874 aa16.36■□□□□ 0.21
SIK3-204ENST00000445177 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
SIK3-204ENST00000445177 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
SIK3-204ENST00000445177 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
SIK3-204ENST00000445177 NME9Q86XW9 330 aa16.36■□□□□ 0.21
SIK3-204ENST00000445177 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
SIK3-204ENST00000445177 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
SIK3-204ENST00000445177 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
SIK3-204ENST00000445177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.35■□□□□ 0.21
SIK3-204ENST00000445177 PDZRN3Q9UPQ7 1066 aa16.35■□□□□ 0.21
SIK3-204ENST00000445177 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
SIK3-204ENST00000445177 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
SIK3-204ENST00000445177 USHBP1Q8N6Y0 703 aa16.34■□□□□ 0.21
SIK3-204ENST00000445177 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.21
SIK3-204ENST00000445177 WWC1Q8IX03 1113 aa16.33■□□□□ 0.21
SIK3-204ENST00000445177 FAM177BA6PVY3 158 aa16.33■□□□□ 0.21
SIK3-204ENST00000445177 ST18O60284 1047 aa16.33■□□□□ 0.2
SIK3-204ENST00000445177 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
SIK3-204ENST00000445177 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
SIK3-204ENST00000445177 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
SIK3-204ENST00000445177 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
SIK3-204ENST00000445177 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
SIK3-204ENST00000445177 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
SIK3-204ENST00000445177 L1TD1Q5T7N2 865 aaKnown RBP16.32■□□□□ 0.2
SIK3-204ENST00000445177 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
SIK3-204ENST00000445177 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
SIK3-204ENST00000445177 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SIK3-204ENST00000445177 ARID3AQ99856 593 aa16.32■□□□□ 0.2
SIK3-204ENST00000445177 IFIT2P09913 472 aaKnown RBP16.31■□□□□ 0.2
SIK3-204ENST00000445177 FOSBP53539 338 aa16.31■□□□□ 0.2
SIK3-204ENST00000445177 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
SIK3-204ENST00000445177 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 WDR62O43379 1518 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
SIK3-204ENST00000445177 GOLGA6L3A6NEY3 463 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 ZC3H6P61129 1189 aaKnown RBP16.3■□□□□ 0.2
SIK3-204ENST00000445177 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
SIK3-204ENST00000445177 MSH5O43196 834 aa16.29■□□□□ 0.2
SIK3-204ENST00000445177 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
SIK3-204ENST00000445177 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
SIK3-204ENST00000445177 SLFN5Q08AF3 891 aa16.28■□□□□ 0.2
SIK3-204ENST00000445177 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
SIK3-204ENST00000445177 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
SIK3-204ENST00000445177 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
SIK3-204ENST00000445177 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
SIK3-204ENST00000445177 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
SIK3-204ENST00000445177 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
SIK3-204ENST00000445177 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
SIK3-204ENST00000445177 MYL6BP14649 208 aa16.27■□□□□ 0.2
SIK3-204ENST00000445177 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
SIK3-204ENST00000445177 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.19
SIK3-204ENST00000445177 KDM4AO75164 1064 aa16.26■□□□□ 0.19
SIK3-204ENST00000445177 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.19
SIK3-204ENST00000445177 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
SIK3-204ENST00000445177 ANKLE2Q86XL3 938 aa16.25■□□□□ 0.19
SIK3-204ENST00000445177 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
SIK3-204ENST00000445177 GAS2L2Q8NHY3 880 aa16.24■□□□□ 0.19
SIK3-204ENST00000445177 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
SIK3-204ENST00000445177 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 SIL1Q9H173 461 aa16.24■□□□□ 0.19
SIK3-204ENST00000445177 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
SIK3-204ENST00000445177 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
SIK3-204ENST00000445177 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
SIK3-204ENST00000445177 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms