RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 TECPR2O15040 1411 aa34.86■■■■□ 3.17
TMEM238-201ENST00000444469 ESCO1Q5FWF5 840 aa34.85■■■■□ 3.17
TMEM238-201ENST00000444469 ABCC11Q96J66 1382 aa34.85■■■■□ 3.17
TMEM238-201ENST00000444469 WAPLQ7Z5K2 1190 aa34.84■■■■□ 3.17
TMEM238-201ENST00000444469 YTHDC2Q9H6S0 1430 aaKnown RBP34.81■■■■□ 3.16
TMEM238-201ENST00000444469 KNDC1Q76NI1 1749 aa34.81■■■■□ 3.16
TMEM238-201ENST00000444469 AFF2P51816 1311 aa34.81■■■■□ 3.16
TMEM238-201ENST00000444469 SOS2Q07890 1332 aaPredicted RBP34.81■■■■□ 3.16
TMEM238-201ENST00000444469 C8orf37Q96NL8 207 aa34.8■■■■□ 3.16
TMEM238-201ENST00000444469 LAMC1P11047 1609 aa34.8■■■■□ 3.16
TMEM238-201ENST00000444469 NPHP3Q7Z494 1330 aa34.8■■■■□ 3.16
TMEM238-201ENST00000444469 MYOM2P54296 1465 aa34.79■■■■□ 3.16
TMEM238-201ENST00000444469 RXRBP28702 533 aa34.79■■■■□ 3.16
TMEM238-201ENST00000444469 DHX57Q6P158 1386 aaKnown RBP34.78■■■■□ 3.16
TMEM238-201ENST00000444469 C14orf93Q9H972 538 aaKnown RBP34.78■■■■□ 3.16
TMEM238-201ENST00000444469 NUTM2FA1L443 756 aa34.76■■■■□ 3.16
TMEM238-201ENST00000444469 ADAMTS2O95450 1211 aa34.75■■■■□ 3.15
TMEM238-201ENST00000444469 CFAP70Q5T0N1 1121 aa34.74■■■■□ 3.15
TMEM238-201ENST00000444469 PLEKHH1Q9ULM0 1364 aa34.74■■■■□ 3.15
TMEM238-201ENST00000444469 NRXN1Q9ULB1 1477 aa34.72■■■■□ 3.15
TMEM238-201ENST00000444469 SIRT1Q96EB6 747 aa34.72■■■■□ 3.15
TMEM238-201ENST00000444469 NGLY1Q96IV0 654 aa34.72■■■■□ 3.15
TMEM238-201ENST00000444469 FOXO3O43524 673 aa34.7■■■■□ 3.15
TMEM238-201ENST00000444469 HRCP23327 699 aa34.69■■■■□ 3.14
TMEM238-201ENST00000444469 POGKQ9P215 609 aa34.66■■■■□ 3.14
TMEM238-201ENST00000444469 XPCQ01831 940 aaPredicted RBP34.65■■■■□ 3.14
TMEM238-201ENST00000444469 QTRT2Q9H974 415 aaKnown RBP34.65■■■■□ 3.14
TMEM238-201ENST00000444469 KDM2AQ9Y2K7 1162 aa34.64■■■■□ 3.14
TMEM238-201ENST00000444469 FMN2Q9NZ56 1722 aa34.64■■■■□ 3.14
TMEM238-201ENST00000444469 DCAF11Q8TEB1 546 aa34.63■■■■□ 3.13
TMEM238-201ENST00000444469 PRAM1Q96QH2 718 aa34.63■■■■□ 3.13
TMEM238-201ENST00000444469 SAFB2Q14151 953 aaKnown RBP eCLIP34.62■■■■□ 3.13
TMEM238-201ENST00000444469 PXDNQ92626 1479 aa34.62■■■■□ 3.13
TMEM238-201ENST00000444469 CDK12Q9NYV4 1490 aaPredicted RBP34.62■■■■□ 3.13
TMEM238-201ENST00000444469 RBM6P78332 1123 aaKnown RBP34.61■■■■□ 3.13
TMEM238-201ENST00000444469 KIF1AQ12756 1690 aa34.6■■■■□ 3.13
TMEM238-201ENST00000444469 COL22A1Q8NFW1 1626 aaPredicted RBP34.6■■■■□ 3.13
TMEM238-201ENST00000444469 STAC3Q96MF2 364 aa34.59■■■■□ 3.13
TMEM238-201ENST00000444469 USP21Q9UK80 565 aa34.58■■■■□ 3.13
TMEM238-201ENST00000444469 DLC1Q96QB1 1528 aa34.55■■■■□ 3.12
TMEM238-201ENST00000444469 PHF8Q9UPP1 1060 aa34.53■■■■□ 3.12
TMEM238-201ENST00000444469 TRAK1Q9UPV9 953 aa34.53■■■■□ 3.12
TMEM238-201ENST00000444469 PSME1Q06323 249 aa34.52■■■■□ 3.12
TMEM238-201ENST00000444469 KRT28Q7Z3Y7 464 aa34.52■■■■□ 3.12
TMEM238-201ENST00000444469 TRPC5Q9UL62 973 aaPredicted RBP34.52■■■■□ 3.12
TMEM238-201ENST00000444469 HAP1P54257 671 aaPredicted RBP34.49■■■■□ 3.11
TMEM238-201ENST00000444469 UPF1Q92900 1129 aaKnown RBP eCLIP34.49■■■■□ 3.11
TMEM238-201ENST00000444469 FNBP4Q8N3X1 1017 aaPredicted RBP34.48■■■■□ 3.11
TMEM238-201ENST00000444469 SPATA31A3Q5VYP0 1347 aa34.48■■■■□ 3.11
TMEM238-201ENST00000444469 ADGRB1O14514 1584 aa34.48■■■■□ 3.11
TMEM238-201ENST00000444469 RGS12O14924 1447 aa34.47■■■■□ 3.11
TMEM238-201ENST00000444469 EIF3AQ14152 1382 aaKnown RBP34.46■■■■□ 3.11
TMEM238-201ENST00000444469 ANKARQ7Z5J8 1434 aa34.45■■■■□ 3.11
TMEM238-201ENST00000444469 HIRIP3Q9BW71 556 aaPredicted RBP34.43■■■■□ 3.1
TMEM238-201ENST00000444469 MINK1Q8N4C8 1332 aaPredicted RBP34.43■■■■□ 3.1
TMEM238-201ENST00000444469 LMOD2Q6P5Q4 547 aa34.42■■■■□ 3.1
TMEM238-201ENST00000444469 RGPD8O14715 1765 aaPredicted RBP34.41■■■■□ 3.1
TMEM238-201ENST00000444469 ADGRB2O60241 1585 aa34.41■■■■□ 3.1
TMEM238-201ENST00000444469 TNS3Q68CZ2 1445 aa34.41■■■■□ 3.1
TMEM238-201ENST00000444469 MARF1Q9Y4F3 1742 aaKnown RBP34.39■■■■□ 3.1
TMEM238-201ENST00000444469 PMFBP1Q8TBY8 1022 aa34.39■■■■□ 3.1
TMEM238-201ENST00000444469 ATRNO75882 1429 aa34.38■■■■□ 3.09
TMEM238-201ENST00000444469 PLEKHG5O94827 1062 aa34.37■■■■□ 3.09
TMEM238-201ENST00000444469 SBNO1A3KN83 1393 aa34.36■■■■□ 3.09
TMEM238-201ENST00000444469 ARHGEF10O15013 1369 aa34.36■■■■□ 3.09
TMEM238-201ENST00000444469 WASLO00401 505 aaPredicted RBP34.33■■■■□ 3.09
TMEM238-201ENST00000444469 GPRASP1Q5JY77 1395 aa34.33■■■■□ 3.09
TMEM238-201ENST00000444469 ATAD2Q6PL18 1390 aa34.32■■■■□ 3.08
TMEM238-201ENST00000444469 TULP4Q9NRJ4 1543 aa34.31■■■■□ 3.08
TMEM238-201ENST00000444469 USP32Q8NFA0 1604 aa34.31■■■■□ 3.08
TMEM238-201ENST00000444469 BCL9LQ86UU0 1499 aa34.31■■■■□ 3.08
TMEM238-201ENST00000444469 UNC5CLQ8IV45 518 aa34.28■■■■□ 3.08
TMEM238-201ENST00000444469 CABLES1Q8TDN4 633 aa34.28■■■■□ 3.08
TMEM238-201ENST00000444469 NGDNQ8NEJ9 315 aaKnown RBP34.27■■■■□ 3.08
TMEM238-201ENST00000444469 GJD4Q96KN9 370 aaPredicted RBP34.27■■■■□ 3.08
TMEM238-201ENST00000444469 ARHGEF28Q8N1W1 1705 aaKnown RBP34.25■■■■□ 3.07
TMEM238-201ENST00000444469 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.23■■■■□ 3.07
TMEM238-201ENST00000444469 SLIT2O94813 1529 aa34.23■■■■□ 3.07
TMEM238-201ENST00000444469 PRR36Q9H6K5 1346 aa34.23■■■■□ 3.07
TMEM238-201ENST00000444469 PAK3O75914 559 aaPredicted RBP34.2■■■■□ 3.07
TMEM238-201ENST00000444469 KIAA1210Q9ULL0 1709 aa34.2■■■■□ 3.07
TMEM238-201ENST00000444469 CCDC9Q9Y3X0 531 aaKnown RBP34.19■■■■□ 3.06
TMEM238-201ENST00000444469 ITSN1Q15811 1721 aa34.17■■■■□ 3.06
TMEM238-201ENST00000444469 NUDT16Q96DE0 195 aaKnown RBP34.17■■■■□ 3.06
TMEM238-201ENST00000444469 ABCA3Q99758 1704 aa34.16■■■■□ 3.06
TMEM238-201ENST00000444469 RALGAPBQ86X10 1494 aa34.15■■■■□ 3.06
TMEM238-201ENST00000444469 CDK19Q9BWU1 502 aa34.15■■■■□ 3.06
TMEM238-201ENST00000444469 TRPM3Q9HCF6 1732 aaPredicted RBP34.14■■■■□ 3.06
TMEM238-201ENST00000444469 VPS72Q15906 364 aa34.12■■■■□ 3.05
TMEM238-201ENST00000444469 ATP7BP35670 1465 aa34.12■■■■□ 3.05
TMEM238-201ENST00000444469 PLCH1Q4KWH8 1693 aa34.12■■■■□ 3.05
TMEM238-201ENST00000444469 NWD2Q9ULI1 1742 aa34.11■■■■□ 3.05
TMEM238-201ENST00000444469 NBPF1Q3BBV0 1214 aa34.1■■■■□ 3.05
TMEM238-201ENST00000444469 ALS2Q96Q42 1657 aa34.09■■■■□ 3.05
TMEM238-201ENST00000444469 GLI3P10071 1580 aa34.08■■■■□ 3.05
TMEM238-201ENST00000444469 FAM83GA6ND36 823 aa34.08■■■■□ 3.05
TMEM238-201ENST00000444469 CCDC125Q86Z20 511 aa34.06■■■■□ 3.04
TMEM238-201ENST00000444469 CCDC61Q9Y6R9 512 aa34.06■■■■□ 3.04
TMEM238-201ENST00000444469 CENPJQ9HC77 1338 aaPredicted RBP34.05■■■■□ 3.04
TMEM238-201ENST00000444469 A0A0G2JS52 829 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms