RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SSH1Q8WYL5 1049 aa14.59□□□□□ -0.07
HCFC1-203ENST00000444191 MCM4P33991 863 aa14.58□□□□□ -0.08
HCFC1-203ENST00000444191 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
HCFC1-203ENST00000444191 DDX19BQ9UMR2 479 aa14.58□□□□□ -0.08
HCFC1-203ENST00000444191 MAGI2Q86UL8 1455 aa14.58□□□□□ -0.08
HCFC1-203ENST00000444191 GBP4Q96PP9 640 aa14.56□□□□□ -0.08
HCFC1-203ENST00000444191 EVC2Q86UK5 1308 aa14.56□□□□□ -0.08
HCFC1-203ENST00000444191 ADGRL2O95490 1459 aa14.56□□□□□ -0.08
HCFC1-203ENST00000444191 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
HCFC1-203ENST00000444191 PLCB2Q00722 1185 aa14.55□□□□□ -0.08
HCFC1-203ENST00000444191 DDX49Q9Y6V7 483 aaKnown RBP14.55□□□□□ -0.08
HCFC1-203ENST00000444191 TRIM27P14373 513 aa14.55□□□□□ -0.08
HCFC1-203ENST00000444191 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
HCFC1-203ENST00000444191 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
HCFC1-203ENST00000444191 FAM43AQ8N2R8 423 aa14.55□□□□□ -0.08
HCFC1-203ENST00000444191 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
HCFC1-203ENST00000444191 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
HCFC1-203ENST00000444191 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
HCFC1-203ENST00000444191 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
HCFC1-203ENST00000444191 ATF7IPQ6VMQ6 1270 aa14.53□□□□□ -0.08
HCFC1-203ENST00000444191 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
HCFC1-203ENST00000444191 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
HCFC1-203ENST00000444191 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
HCFC1-203ENST00000444191 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
HCFC1-203ENST00000444191 PTMAP06454 111 aaKnown RBP14.52□□□□□ -0.09
HCFC1-203ENST00000444191 TMPOP42166 694 aaKnown RBP14.52□□□□□ -0.09
HCFC1-203ENST00000444191 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
HCFC1-203ENST00000444191 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
HCFC1-203ENST00000444191 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
HCFC1-203ENST00000444191 PLA2R1Q13018 1463 aa14.51□□□□□ -0.09
HCFC1-203ENST00000444191 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
HCFC1-203ENST00000444191 ZMYND15Q9H091 742 aa14.51□□□□□ -0.09
HCFC1-203ENST00000444191 TRAPPC8Q9Y2L5 1435 aa14.5□□□□□ -0.09
HCFC1-203ENST00000444191 DDX11L8A8MPP1 907 aa14.5□□□□□ -0.09
HCFC1-203ENST00000444191 NECTIN2Q92692 538 aa14.5□□□□□ -0.09
HCFC1-203ENST00000444191 ZNF521Q96K83 1311 aa14.5□□□□□ -0.09
HCFC1-203ENST00000444191 ASXL1Q8IXJ9 1541 aa14.5□□□□□ -0.09
HCFC1-203ENST00000444191 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-203ENST00000444191 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
HCFC1-203ENST00000444191 MPNDQ8N594 471 aa14.49□□□□□ -0.09
HCFC1-203ENST00000444191 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
HCFC1-203ENST00000444191 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
HCFC1-203ENST00000444191 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
HCFC1-203ENST00000444191 MSNP26038 577 aaKnown RBP14.49□□□□□ -0.09
HCFC1-203ENST00000444191 DNTTIP2Q5QJE6 756 aaKnown RBP14.49□□□□□ -0.09
HCFC1-203ENST00000444191 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
HCFC1-203ENST00000444191 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
HCFC1-203ENST00000444191 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
HCFC1-203ENST00000444191 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
HCFC1-203ENST00000444191 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-203ENST00000444191 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
HCFC1-203ENST00000444191 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
HCFC1-203ENST00000444191 GRPEL1Q9HAV7 217 aa14.47□□□□□ -0.09
HCFC1-203ENST00000444191 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
HCFC1-203ENST00000444191 USP19O94966 1318 aa14.47□□□□□ -0.09
HCFC1-203ENST00000444191 CHD1LQ86WJ1 897 aa14.46□□□□□ -0.09
HCFC1-203ENST00000444191 MRE11P49959 708 aa14.46□□□□□ -0.09
HCFC1-203ENST00000444191 CASC1Q6TDU7 716 aa14.46□□□□□ -0.09
HCFC1-203ENST00000444191 NOS1P29475 1434 aa14.45□□□□□ -0.1
HCFC1-203ENST00000444191 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
HCFC1-203ENST00000444191 CFAP65Q6ZU64 1925 aaKnown RBP14.45□□□□□ -0.1
HCFC1-203ENST00000444191 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
HCFC1-203ENST00000444191 ADGBQ8N7X0 1667 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 CAVIN1Q6NZI2 390 aaKnown RBP14.44□□□□□ -0.1
HCFC1-203ENST00000444191 RNF214Q8ND24 703 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 KIF16BQ96L93 1317 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 TRIM6-TRIM34B2RNG4 842 aa14.44□□□□□ -0.1
HCFC1-203ENST00000444191 KDM5DQ9BY66 1539 aa14.43□□□□□ -0.1
HCFC1-203ENST00000444191 SHANK2Q9UPX8 1470 aa14.43□□□□□ -0.1
HCFC1-203ENST00000444191 SSFA2P28290 1259 aa14.43□□□□□ -0.1
HCFC1-203ENST00000444191 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
HCFC1-203ENST00000444191 STAC3Q96MF2 364 aa14.43□□□□□ -0.1
HCFC1-203ENST00000444191 RRS1Q15050 365 aaKnown RBP14.43□□□□□ -0.1
HCFC1-203ENST00000444191 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
HCFC1-203ENST00000444191 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
HCFC1-203ENST00000444191 FAM83GA6ND36 823 aa14.41□□□□□ -0.1
HCFC1-203ENST00000444191 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
HCFC1-203ENST00000444191 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
HCFC1-203ENST00000444191 ESPNB1AK53 854 aa14.41□□□□□ -0.1
HCFC1-203ENST00000444191 NASPP49321 788 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-203ENST00000444191 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
HCFC1-203ENST00000444191 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
HCFC1-203ENST00000444191 WAPLQ7Z5K2 1190 aa14.4□□□□□ -0.1
HCFC1-203ENST00000444191 MIS18AQ9NYP9 233 aa14.4□□□□□ -0.1
HCFC1-203ENST00000444191 TSPYL6Q8N831 410 aa14.4□□□□□ -0.1
HCFC1-203ENST00000444191 CHMP4BQ9H444 224 aaKnown RBP14.4□□□□□ -0.1
HCFC1-203ENST00000444191 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
HCFC1-203ENST00000444191 EMILIN1Q9Y6C2 1016 aa14.39□□□□□ -0.11
HCFC1-203ENST00000444191 LTV1Q96GA3 475 aaPredicted RBP14.39□□□□□ -0.11
HCFC1-203ENST00000444191 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
HCFC1-203ENST00000444191 FAM13BQ9NYF5 915 aa14.39□□□□□ -0.11
HCFC1-203ENST00000444191 C16orf71Q8IYS4 520 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-203ENST00000444191 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
HCFC1-203ENST00000444191 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
HCFC1-203ENST00000444191 TBC1D9Q6ZT07 1266 aa14.38□□□□□ -0.11
HCFC1-203ENST00000444191 ATAD2Q6PL18 1390 aa14.37□□□□□ -0.11
HCFC1-203ENST00000444191 K7ELQ4 463 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-203ENST00000444191 AAMPQ13685 434 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms