RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 NHSL1Q5SYE7 1610 aa27.45■■□□□ 1.99
ATPAF2-201ENST00000444058 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
ATPAF2-201ENST00000444058 PLEKHH1Q9ULM0 1364 aa27.43■■□□□ 1.98
ATPAF2-201ENST00000444058 LRRC59Q96AG4 307 aaKnown RBP27.42■■□□□ 1.98
ATPAF2-201ENST00000444058 ADGRB1O14514 1584 aa27.41■■□□□ 1.98
ATPAF2-201ENST00000444058 SOCS7O14512 581 aa27.41■■□□□ 1.98
ATPAF2-201ENST00000444058 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
ATPAF2-201ENST00000444058 SHPRHQ149N8 1683 aa27.4■■□□□ 1.98
ATPAF2-201ENST00000444058 ORAI2Q96SN7 254 aa27.4■■□□□ 1.98
ATPAF2-201ENST00000444058 RGS17Q9UGC6 210 aaPredicted RBP27.39■■□□□ 1.98
ATPAF2-201ENST00000444058 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
ATPAF2-201ENST00000444058 PRAM1Q96QH2 718 aa27.35■■□□□ 1.97
ATPAF2-201ENST00000444058 ESCO1Q5FWF5 840 aa27.34■■□□□ 1.97
ATPAF2-201ENST00000444058 DDX17Q92841 729 aaKnown RBP27.34■■□□□ 1.97
ATPAF2-201ENST00000444058 POGKQ9P215 609 aa27.32■■□□□ 1.96
ATPAF2-201ENST00000444058 LRP6O75581 1613 aa27.31■■□□□ 1.96
ATPAF2-201ENST00000444058 NPHP3Q7Z494 1330 aa27.31■■□□□ 1.96
ATPAF2-201ENST00000444058 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
ATPAF2-201ENST00000444058 TRAK1Q9UPV9 953 aa27.29■■□□□ 1.96
ATPAF2-201ENST00000444058 PNPLA6Q8IY17 1366 aa27.29■■□□□ 1.96
ATPAF2-201ENST00000444058 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
ATPAF2-201ENST00000444058 MEX3CQ5U5Q3 659 aaKnown RBP27.26■■□□□ 1.95
ATPAF2-201ENST00000444058 NUTM2FA1L443 756 aa27.25■■□□□ 1.95
ATPAF2-201ENST00000444058 SAFB2Q14151 953 aaKnown RBP eCLIP27.25■■□□□ 1.95
ATPAF2-201ENST00000444058 ADGRB2O60241 1585 aa27.25■■□□□ 1.95
ATPAF2-201ENST00000444058 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
ATPAF2-201ENST00000444058 FOXO3O43524 673 aa27.24■■□□□ 1.95
ATPAF2-201ENST00000444058 PXDNQ92626 1479 aa27.23■■□□□ 1.95
ATPAF2-201ENST00000444058 POTEAQ6S8J7 498 aa27.22■■□□□ 1.95
ATPAF2-201ENST00000444058 ANKARQ7Z5J8 1434 aa27.22■■□□□ 1.95
ATPAF2-201ENST00000444058 KIF1AQ12756 1690 aa27.21■■□□□ 1.95
ATPAF2-201ENST00000444058 NUTM2BA6NNL0 878 aaPredicted RBP27.21■■□□□ 1.95
ATPAF2-201ENST00000444058 NUTM2EB1AL46 878 aaPredicted RBP27.21■■□□□ 1.95
ATPAF2-201ENST00000444058 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
ATPAF2-201ENST00000444058 NUTM2AQ8IVF1 878 aaPredicted RBP27.21■■□□□ 1.95
ATPAF2-201ENST00000444058 L3MBTL2Q969R5 705 aa27.2■■□□□ 1.94
ATPAF2-201ENST00000444058 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
ATPAF2-201ENST00000444058 SIN3AQ96ST3 1273 aa27.19■■□□□ 1.94
ATPAF2-201ENST00000444058 PHF8Q9UPP1 1060 aa27.18■■□□□ 1.94
ATPAF2-201ENST00000444058 COL22A1Q8NFW1 1626 aaPredicted RBP27.16■■□□□ 1.94
ATPAF2-201ENST00000444058 MINK1Q8N4C8 1332 aaPredicted RBP27.16■■□□□ 1.94
ATPAF2-201ENST00000444058 WASLO00401 505 aaPredicted RBP27.15■■□□□ 1.94
ATPAF2-201ENST00000444058 ARHGEF28Q8N1W1 1705 aaKnown RBP27.15■■□□□ 1.94
ATPAF2-201ENST00000444058 HIRIP3Q9BW71 556 aaPredicted RBP27.14■■□□□ 1.94
ATPAF2-201ENST00000444058 XPCQ01831 940 aaPredicted RBP27.13■■□□□ 1.93
ATPAF2-201ENST00000444058 NBPF1Q3BBV0 1214 aa27.13■■□□□ 1.93
ATPAF2-201ENST00000444058 NEUROD1Q13562 356 aa27.12■■□□□ 1.93
ATPAF2-201ENST00000444058 TULP4Q9NRJ4 1543 aa27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 PSME1Q06323 249 aa27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 KRT28Q7Z3Y7 464 aa27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 RGPD8O14715 1765 aaPredicted RBP27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 USP32Q8NFA0 1604 aa27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 SPATA31A3Q5VYP0 1347 aa27.11■■□□□ 1.93
ATPAF2-201ENST00000444058 AFF2P51816 1311 aa27.09■■□□□ 1.93
ATPAF2-201ENST00000444058 ADAMTS2O95450 1211 aa27.07■■□□□ 1.92
ATPAF2-201ENST00000444058 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
ATPAF2-201ENST00000444058 PRR36Q9H6K5 1346 aa27.07■■□□□ 1.92
ATPAF2-201ENST00000444058 SBNO1A3KN83 1393 aa27.07■■□□□ 1.92
ATPAF2-201ENST00000444058 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
ATPAF2-201ENST00000444058 PMFBP1Q8TBY8 1022 aa27.04■■□□□ 1.92
ATPAF2-201ENST00000444058 TNS3Q68CZ2 1445 aa27.03■■□□□ 1.92
ATPAF2-201ENST00000444058 FNBP4Q8N3X1 1017 aaPredicted RBP27.02■■□□□ 1.92
ATPAF2-201ENST00000444058 CENPJQ9HC77 1338 aaPredicted RBP27.01■■□□□ 1.91
ATPAF2-201ENST00000444058 RXRBP28702 533 aa27.01■■□□□ 1.91
ATPAF2-201ENST00000444058 NUDT16Q96DE0 195 aaKnown RBP27.01■■□□□ 1.91
ATPAF2-201ENST00000444058 CDK19Q9BWU1 502 aa27.01■■□□□ 1.91
ATPAF2-201ENST00000444058 ATP7BP35670 1465 aa27■■□□□ 1.91
ATPAF2-201ENST00000444058 ARHGEF10O15013 1369 aa27■■□□□ 1.91
ATPAF2-201ENST00000444058 GPRASP1Q5JY77 1395 aa27■■□□□ 1.91
ATPAF2-201ENST00000444058 TRPM1Q7Z4N2 1603 aa27■■□□□ 1.91
ATPAF2-201ENST00000444058 CDK12Q9NYV4 1490 aaPredicted RBP26.98■■□□□ 1.91
ATPAF2-201ENST00000444058 QTRT2Q9H974 415 aaKnown RBP26.97■■□□□ 1.91
ATPAF2-201ENST00000444058 CCDC61Q9Y6R9 512 aa26.97■■□□□ 1.91
ATPAF2-201ENST00000444058 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
ATPAF2-201ENST00000444058 NGDNQ8NEJ9 315 aaKnown RBP26.96■■□□□ 1.91
ATPAF2-201ENST00000444058 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
ATPAF2-201ENST00000444058 USP21Q9UK80 565 aa26.95■■□□□ 1.9
ATPAF2-201ENST00000444058 TONSLQ96HA7 1378 aa26.95■■□□□ 1.9
ATPAF2-201ENST00000444058 RBM6P78332 1123 aaKnown RBP26.94■■□□□ 1.9
ATPAF2-201ENST00000444058 NBPF8Q3BBV2 869 aa26.93■■□□□ 1.9
ATPAF2-201ENST00000444058 MARF1Q9Y4F3 1742 aaKnown RBP26.93■■□□□ 1.9
ATPAF2-201ENST00000444058 PLEKHG3A1L390 1219 aa26.92■■□□□ 1.9
ATPAF2-201ENST00000444058 TRPC5Q9UL62 973 aaPredicted RBP26.92■■□□□ 1.9
ATPAF2-201ENST00000444058 TRPM3Q9HCF6 1732 aaPredicted RBP26.92■■□□□ 1.9
ATPAF2-201ENST00000444058 LMOD2Q6P5Q4 547 aa26.91■■□□□ 1.9
ATPAF2-201ENST00000444058 POLR3AO14802 1390 aaPredicted RBP26.91■■□□□ 1.9
ATPAF2-201ENST00000444058 BCL9LQ86UU0 1499 aa26.89■■□□□ 1.9
ATPAF2-201ENST00000444058 TOPAZ1Q8N9V7 1692 aa26.89■■□□□ 1.89
ATPAF2-201ENST00000444058 HAP1P54257 671 aaPredicted RBP26.88■■□□□ 1.89
ATPAF2-201ENST00000444058 SRPK2P78362 688 aaKnown RBP26.88■■□□□ 1.89
ATPAF2-201ENST00000444058 QRICH2Q9H0J4 1663 aa26.88■■□□□ 1.89
ATPAF2-201ENST00000444058 ALS2Q96Q42 1657 aa26.87■■□□□ 1.89
ATPAF2-201ENST00000444058 CABLES1Q8TDN4 633 aa26.87■■□□□ 1.89
ATPAF2-201ENST00000444058 ATRNO75882 1429 aa26.87■■□□□ 1.89
ATPAF2-201ENST00000444058 SLIT2O94813 1529 aa26.86■■□□□ 1.89
ATPAF2-201ENST00000444058 ACEP12821 1306 aa26.86■■□□□ 1.89
ATPAF2-201ENST00000444058 EVC2Q86UK5 1308 aa26.85■■□□□ 1.89
ATPAF2-201ENST00000444058 RALGAPBQ86X10 1494 aa26.83■■□□□ 1.89
ATPAF2-201ENST00000444058 UNC5CLQ8IV45 518 aa26.83■■□□□ 1.89
ATPAF2-201ENST00000444058 CABP2Q9NPB3 220 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms