RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 PLA2R1Q13018 1463 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 YEATS2Q9ULM3 1422 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 EXOSC9Q06265 439 aaKnown RBP13.46□□□□□ -0.25
CALD1-210ENST00000443197 SKAP1Q86WV1 359 aa13.46□□□□□ -0.25
CALD1-210ENST00000443197 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
CALD1-210ENST00000443197 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
CALD1-210ENST00000443197 ABTB2Q8N961 1025 aa13.46□□□□□ -0.26
CALD1-210ENST00000443197 PDE4AP27815 886 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 ESCO1Q5FWF5 840 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 DDRGK1Q96HY6 314 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 POGZQ7Z3K3 1410 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
CALD1-210ENST00000443197 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
CALD1-210ENST00000443197 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 ABCC1P33527 1531 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
CALD1-210ENST00000443197 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 AMOTL2Q9Y2J4 779 aa13.44□□□□□ -0.26
CALD1-210ENST00000443197 NGEFQ8N5V2 710 aa13.43□□□□□ -0.26
CALD1-210ENST00000443197 NPATQ14207 1427 aa13.43□□□□□ -0.26
CALD1-210ENST00000443197 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
CALD1-210ENST00000443197 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
CALD1-210ENST00000443197 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
CALD1-210ENST00000443197 ATP10AO60312 1499 aa13.43□□□□□ -0.26
CALD1-210ENST00000443197 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
CALD1-210ENST00000443197 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
CALD1-210ENST00000443197 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
CALD1-210ENST00000443197 FYB1O15117 783 aa13.41□□□□□ -0.26
CALD1-210ENST00000443197 BECN1Q14457 450 aa13.41□□□□□ -0.26
CALD1-210ENST00000443197 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
CALD1-210ENST00000443197 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
CALD1-210ENST00000443197 SLC4A3P48751 1232 aa13.4□□□□□ -0.26
CALD1-210ENST00000443197 ANKLE2Q86XL3 938 aa13.4□□□□□ -0.26
CALD1-210ENST00000443197 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
CALD1-210ENST00000443197 CDC42BPBQ9Y5S2 1711 aa13.4□□□□□ -0.26
CALD1-210ENST00000443197 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
CALD1-210ENST00000443197 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
CALD1-210ENST00000443197 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
CALD1-210ENST00000443197 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
CALD1-210ENST00000443197 DUSP27Q5VZP5 1158 aa13.39□□□□□ -0.27
CALD1-210ENST00000443197 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
CALD1-210ENST00000443197 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
CALD1-210ENST00000443197 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
CALD1-210ENST00000443197 ZMYM3Q14202 1370 aa13.39□□□□□ -0.27
CALD1-210ENST00000443197 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
CALD1-210ENST00000443197 TNRQ92752 1358 aa13.38□□□□□ -0.27
CALD1-210ENST00000443197 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
CALD1-210ENST00000443197 GNAI1P63096 354 aa13.37□□□□□ -0.27
CALD1-210ENST00000443197 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
CALD1-210ENST00000443197 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
CALD1-210ENST00000443197 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
CALD1-210ENST00000443197 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
CALD1-210ENST00000443197 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
CALD1-210ENST00000443197 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
CALD1-210ENST00000443197 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
CALD1-210ENST00000443197 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
CALD1-210ENST00000443197 TEFQ10587 303 aa13.35□□□□□ -0.27
CALD1-210ENST00000443197 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
CALD1-210ENST00000443197 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
CALD1-210ENST00000443197 ATF3P18847 181 aa13.35□□□□□ -0.27
CALD1-210ENST00000443197 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
CALD1-210ENST00000443197 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
CALD1-210ENST00000443197 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
CALD1-210ENST00000443197 NEO1Q92859 1461 aa13.34□□□□□ -0.27
CALD1-210ENST00000443197 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
CALD1-210ENST00000443197 FCHSD2O94868 740 aa13.34□□□□□ -0.27
CALD1-210ENST00000443197 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
CALD1-210ENST00000443197 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.27
CALD1-210ENST00000443197 ACEP12821 1306 aa13.33□□□□□ -0.28
CALD1-210ENST00000443197 TWISTNBQ3B726 338 aaPredicted RBP13.33□□□□□ -0.28
CALD1-210ENST00000443197 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
CALD1-210ENST00000443197 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.28
CALD1-210ENST00000443197 FOXO3O43524 673 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 KDM5CP41229 1560 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 MCM10Q7L590 875 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
CALD1-210ENST00000443197 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
CALD1-210ENST00000443197 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
CALD1-210ENST00000443197 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
CALD1-210ENST00000443197 FKBP5Q13451 457 aaPredicted RBP13.31□□□□□ -0.28
CALD1-210ENST00000443197 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
CALD1-210ENST00000443197 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 FAM83GA6ND36 823 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
CALD1-210ENST00000443197 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 MAGI2Q86UL8 1455 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 USHBP1Q8N6Y0 703 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
CALD1-210ENST00000443197 MLH3Q9UHC1 1453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms