RNA–Protein interactions for RNA: ENST00000442210.2

ARL6IP4-209, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 3

Gene ARL6IP4, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-209	ENST00000442210	IFT172	Q9UG01	1749 aa		33.01	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	USP21	Q9UK80	565 aa		33	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	CCDC144A	A2RUR9	1427 aa		33	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	ESCO1	Q5FWF5	840 aa		32.99	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	NPHP3	Q7Z494	1330 aa		32.99	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	ADGRF5	Q8IZF2	1346 aa		32.99	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.97	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	MARF1	Q9Y4F3	1742 aa	Known RBP	32.97	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	TECPR2	O15040	1411 aa		32.96	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	TRPC5	Q9UL62	973 aa	Predicted RBP	32.96	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	PXDN	Q92626	1479 aa		32.96	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	SPATA31E1	Q6ZUB1	1445 aa		32.95	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	KNDC1	Q76NI1	1749 aa		32.95	■■■□□ 2.87
ARL6IP4-209	ENST00000442210	MYOM2	P54296	1465 aa		32.94	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	ANKRD30B	Q9BXX2	1392 aa		32.94	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	RGL3	Q3MIN7	710 aa		32.93	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	STK26	Q9P289	416 aa		32.92	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	LRPPRC	P42704	1394 aa	Known RBP	32.92	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	ATRN	O75882	1429 aa		32.91	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	WAPL	Q7Z5K2	1190 aa		32.9	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	ATAD2	Q6PL18	1390 aa		32.9	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	ABCC11	Q96J66	1382 aa		32.89	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	FOXO3	O43524	673 aa		32.89	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	MPHOSPH9	Q99550	1183 aa		32.89	■■■□□ 2.86
ARL6IP4-209	ENST00000442210	FMN2	Q9NZ56	1722 aa		32.88	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	PIK3C2G	O75747	1445 aa		32.86	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	XPC	Q01831	940 aa	Predicted RBP	32.86	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	NUTM2F	A1L443	756 aa		32.85	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	TMEM132E	Q6IEE7	984 aa		32.85	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	BCL9L	Q86UU0	1499 aa		32.84	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	PLEKHH1	Q9ULM0	1364 aa		32.83	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	KIF1A	Q12756	1690 aa		32.83	■■■□□ 2.85
ARL6IP4-209	ENST00000442210	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.81	■■■□□ 2.84
ARL6IP4-209	ENST00000442210	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.8	■■■□□ 2.84
ARL6IP4-209	ENST00000442210	EP400	Q96L91	3159 aa		32.79	■■■□□ 2.84
ARL6IP4-209	ENST00000442210	RGPD8	O14715	1765 aa	Predicted RBP	32.78	■■■□□ 2.84
ARL6IP4-209	ENST00000442210	SIRT1	Q96EB6	747 aa		32.75	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	SPATA31A3	Q5VYP0	1347 aa		32.75	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	GJD4	Q96KN9	370 aa	Predicted RBP	32.74	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	C14orf93	Q9H972	538 aa	Known RBP	32.72	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	ACIN1	Q9UKV3	1341 aa	Known RBP	32.71	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	NRXN1	Q9ULB1	1477 aa		32.7	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	SLIT2	O94813	1529 aa		32.7	■■■□□ 2.83
ARL6IP4-209	ENST00000442210	USP32	Q8NFA0	1604 aa		32.69	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	KRT28	Q7Z3Y7	464 aa		32.69	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	SRCAP	Q6ZRS2	3230 aa		32.68	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	UNC5CL	Q8IV45	518 aa		32.68	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	CCDC125	Q86Z20	511 aa		32.67	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	DHX57	Q6P158	1386 aa	Known RBP	32.67	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	GLI3	P10071	1580 aa		32.66	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	PHF8	Q9UPP1	1060 aa		32.65	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	CFAP70	Q5T0N1	1121 aa		32.64	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	TNS3	Q68CZ2	1445 aa		32.64	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	RALGAPB	Q86X10	1494 aa		32.64	■■■□□ 2.82
ARL6IP4-209	ENST00000442210	PSME1	Q06323	249 aa		32.62	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	BRWD3	Q6RI45	1802 aa		32.62	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	ZRANB1	Q9UGI0	708 aa		32.61	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	ABCA3	Q99758	1704 aa		32.6	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	NWD2	Q9ULI1	1742 aa		32.59	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	PLCH1	Q4KWH8	1693 aa		32.59	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	DLC1	Q96QB1	1528 aa		32.58	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	HAP1	P54257	671 aa	Predicted RBP	32.58	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	PRAM1	Q96QH2	718 aa		32.58	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	SBNO1	A3KN83	1393 aa		32.58	■■■□□ 2.81
ARL6IP4-209	ENST00000442210	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	CABLES1	Q8TDN4	633 aa		32.55	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	ADGRB2	O60241	1585 aa		32.53	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	ANKAR	Q7Z5J8	1434 aa		32.53	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	ARHGEF10	O15013	1369 aa		32.53	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	POGK	Q9P215	609 aa		32.52	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	BLM	P54132	1417 aa	Predicted RBP	32.51	■■■□□ 2.8
ARL6IP4-209	ENST00000442210	VPS72	Q15906	364 aa		32.51	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	LMOD2	Q6P5Q4	547 aa		32.5	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	ADGRB1	O14514	1584 aa		32.49	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	PLEKHG5	O94827	1062 aa		32.48	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	SEPT12	Q8IYM1	358 aa		32.47	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	PMFBP1	Q8TBY8	1022 aa		32.47	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.47	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	RAB3GAP2	Q9H2M9	1393 aa		32.46	■■■□□ 2.79
ARL6IP4-209	ENST00000442210	ONECUT3	O60422	494 aa	Predicted RBP	32.44	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	CCDC9	Q9Y3X0	531 aa	Known RBP	32.44	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	ALS2	Q96Q42	1657 aa		32.43	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	TRAK1	Q9UPV9	953 aa		32.42	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	NRAP	Q86VF7	1730 aa		32.42	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	FAM83G	A6ND36	823 aa		32.41	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.4	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	EIF3A	Q14152	1382 aa	Known RBP	32.4	■■■□□ 2.78
ARL6IP4-209	ENST00000442210	TULP4	Q9NRJ4	1543 aa		32.38	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	GPRASP1	Q5JY77	1395 aa		32.38	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	SF3B2	Q13435	895 aa	Known RBP	32.38	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.37	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	KRT27	Q7Z3Y8	459 aa		32.37	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	DEFB132	Q7Z7B7	95 aa		32.37	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	COL14A1	Q05707	1796 aa	Known RBP	32.37	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	PRR36	Q9H6K5	1346 aa		32.35	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	KDM2A	Q9Y2K7	1162 aa		32.35	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	DCAF11	Q8TEB1	546 aa		32.34	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	WASL	O00401	505 aa	Predicted RBP	32.33	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	CRYBG1	Q9Y4K1	1723 aa		32.33	■■■□□ 2.77
ARL6IP4-209	ENST00000442210	STAC3	Q96MF2	364 aa		32.32	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms