RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 NPHP3Q7Z494 1330 aa16.27■□□□□ 0.2
NELFE-205ENST00000441998 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
NELFE-205ENST00000441998 IFT172Q9UG01 1749 aa16.27■□□□□ 0.19
NELFE-205ENST00000441998 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
NELFE-205ENST00000441998 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
NELFE-205ENST00000441998 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
NELFE-205ENST00000441998 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
NELFE-205ENST00000441998 NALCNQ8IZF0 1738 aa16.25■□□□□ 0.19
NELFE-205ENST00000441998 LAMC1P11047 1609 aa16.24■□□□□ 0.19
NELFE-205ENST00000441998 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
NELFE-205ENST00000441998 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
NELFE-205ENST00000441998 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
NELFE-205ENST00000441998 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
NELFE-205ENST00000441998 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
NELFE-205ENST00000441998 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
NELFE-205ENST00000441998 PRAM1Q96QH2 718 aa16.22■□□□□ 0.19
NELFE-205ENST00000441998 LRP6O75581 1613 aa16.22■□□□□ 0.19
NELFE-205ENST00000441998 POGKQ9P215 609 aa16.21■□□□□ 0.19
NELFE-205ENST00000441998 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
NELFE-205ENST00000441998 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
NELFE-205ENST00000441998 FOXO3O43524 673 aa16.2■□□□□ 0.18
NELFE-205ENST00000441998 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
NELFE-205ENST00000441998 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
NELFE-205ENST00000441998 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
NELFE-205ENST00000441998 ADGRB1O14514 1584 aa16.18■□□□□ 0.18
NELFE-205ENST00000441998 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
NELFE-205ENST00000441998 PSME1Q06323 249 aa16.17■□□□□ 0.18
NELFE-205ENST00000441998 RXRBP28702 533 aa16.16■□□□□ 0.18
NELFE-205ENST00000441998 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
NELFE-205ENST00000441998 TRAK1Q9UPV9 953 aa16.16■□□□□ 0.18
NELFE-205ENST00000441998 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
NELFE-205ENST00000441998 FNBP4Q8N3X1 1017 aaPredicted RBP16.15■□□□□ 0.18
NELFE-205ENST00000441998 PXDNQ92626 1479 aa16.15■□□□□ 0.18
NELFE-205ENST00000441998 AFF2P51816 1311 aa16.15■□□□□ 0.18
NELFE-205ENST00000441998 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
NELFE-205ENST00000441998 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
NELFE-205ENST00000441998 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
NELFE-205ENST00000441998 NUTM2FA1L443 756 aa16.13■□□□□ 0.17
NELFE-205ENST00000441998 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
NELFE-205ENST00000441998 C8orf37Q96NL8 207 aa16.13■□□□□ 0.17
NELFE-205ENST00000441998 CDK12Q9NYV4 1490 aaPredicted RBP16.13■□□□□ 0.17
NELFE-205ENST00000441998 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
NELFE-205ENST00000441998 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
NELFE-205ENST00000441998 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
NELFE-205ENST00000441998 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
NELFE-205ENST00000441998 ADAMTS2O95450 1211 aa16.1■□□□□ 0.17
NELFE-205ENST00000441998 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
NELFE-205ENST00000441998 FMN2Q9NZ56 1722 aa16.09■□□□□ 0.17
NELFE-205ENST00000441998 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
NELFE-205ENST00000441998 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.17
NELFE-205ENST00000441998 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.16
NELFE-205ENST00000441998 USP21Q9UK80 565 aa16.08■□□□□ 0.16
NELFE-205ENST00000441998 ARHGEF10O15013 1369 aa16.08■□□□□ 0.16
NELFE-205ENST00000441998 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
NELFE-205ENST00000441998 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
NELFE-205ENST00000441998 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
NELFE-205ENST00000441998 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
NELFE-205ENST00000441998 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
NELFE-205ENST00000441998 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
NELFE-205ENST00000441998 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
NELFE-205ENST00000441998 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
NELFE-205ENST00000441998 NBPF1Q3BBV0 1214 aa16.04■□□□□ 0.16
NELFE-205ENST00000441998 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
NELFE-205ENST00000441998 NUDT16Q96DE0 195 aaKnown RBP16.04■□□□□ 0.16
NELFE-205ENST00000441998 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
NELFE-205ENST00000441998 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
NELFE-205ENST00000441998 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
NELFE-205ENST00000441998 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.16
NELFE-205ENST00000441998 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
NELFE-205ENST00000441998 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
NELFE-205ENST00000441998 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
NELFE-205ENST00000441998 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
NELFE-205ENST00000441998 BCL9LQ86UU0 1499 aa16.01■□□□□ 0.15
NELFE-205ENST00000441998 ATRNO75882 1429 aa16.01■□□□□ 0.15
NELFE-205ENST00000441998 CENPJQ9HC77 1338 aaPredicted RBP16■□□□□ 0.15
NELFE-205ENST00000441998 HAP1P54257 671 aaPredicted RBP15.99■□□□□ 0.15
NELFE-205ENST00000441998 UPF1Q92900 1129 aaKnown RBP eCLIP15.99■□□□□ 0.15
NELFE-205ENST00000441998 GJD4Q96KN9 370 aaPredicted RBP15.99■□□□□ 0.15
NELFE-205ENST00000441998 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
NELFE-205ENST00000441998 SLIT2O94813 1529 aa15.98■□□□□ 0.15
NELFE-205ENST00000441998 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
NELFE-205ENST00000441998 BRD4O60885 1362 aaPredicted RBP15.98■□□□□ 0.15
NELFE-205ENST00000441998 LMOD2Q6P5Q4 547 aa15.97■□□□□ 0.15
NELFE-205ENST00000441998 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
NELFE-205ENST00000441998 ATP7BP35670 1465 aa15.97■□□□□ 0.15
NELFE-205ENST00000441998 NBPF8Q3BBV2 869 aa15.96■□□□□ 0.15
NELFE-205ENST00000441998 RGS12O14924 1447 aa15.95■□□□□ 0.14
NELFE-205ENST00000441998 VPS72Q15906 364 aa15.95■□□□□ 0.14
NELFE-205ENST00000441998 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
NELFE-205ENST00000441998 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
NELFE-205ENST00000441998 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
NELFE-205ENST00000441998 ACEP12821 1306 aa15.94■□□□□ 0.14
NELFE-205ENST00000441998 ROCK2O75116 1388 aaKnown RBP15.93■□□□□ 0.14
NELFE-205ENST00000441998 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
NELFE-205ENST00000441998 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
NELFE-205ENST00000441998 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
NELFE-205ENST00000441998 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
NELFE-205ENST00000441998 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
NELFE-205ENST00000441998 CCDC125Q86Z20 511 aa15.92■□□□□ 0.14
NELFE-205ENST00000441998 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms