RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NR1I2O75469 434 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 HRCP23327 699 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 MTMR2Q13614 643 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 Q3C1V9 767 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 PPP2R2DQ66LE6 453 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
PFDN4-202ENST00000441080 RFC5P40937 340 aa10.16□□□□□ -0.78
PFDN4-202ENST00000441080 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
PFDN4-202ENST00000441080 COPS2P61201 443 aa10.15□□□□□ -0.78
PFDN4-202ENST00000441080 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
PFDN4-202ENST00000441080 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
PFDN4-202ENST00000441080 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
PFDN4-202ENST00000441080 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
PFDN4-202ENST00000441080 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
PFDN4-202ENST00000441080 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
PFDN4-202ENST00000441080 MTRQ99707 1265 aa10.12□□□□□ -0.79
PFDN4-202ENST00000441080 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
PFDN4-202ENST00000441080 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
PFDN4-202ENST00000441080 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
PFDN4-202ENST00000441080 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
PFDN4-202ENST00000441080 AP1G2O75843 785 aa10.1□□□□□ -0.79
PFDN4-202ENST00000441080 FLIIQ13045 1269 aa10.1□□□□□ -0.79
PFDN4-202ENST00000441080 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
PFDN4-202ENST00000441080 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
PFDN4-202ENST00000441080 TSC1Q92574 1164 aa10.1□□□□□ -0.79
PFDN4-202ENST00000441080 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
PFDN4-202ENST00000441080 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
PFDN4-202ENST00000441080 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
PFDN4-202ENST00000441080 HELBQ8NG08 1087 aaPredicted RBP10.09□□□□□ -0.79
PFDN4-202ENST00000441080 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
PFDN4-202ENST00000441080 THAP11Q96EK4 314 aa10.09□□□□□ -0.79
PFDN4-202ENST00000441080 USB1Q9BQ65 265 aaKnown RBP10.09□□□□□ -0.79
PFDN4-202ENST00000441080 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
PFDN4-202ENST00000441080 TIMELESSQ9UNS1 1208 aa10.08□□□□□ -0.8
PFDN4-202ENST00000441080 ZPR1O75312 459 aa10.07□□□□□ -0.8
PFDN4-202ENST00000441080 MCM6Q14566 821 aa10.07□□□□□ -0.8
PFDN4-202ENST00000441080 TJAP1Q5JTD0 557 aa10.07□□□□□ -0.8
PFDN4-202ENST00000441080 TLL1O43897 1013 aa10.06□□□□□ -0.8
PFDN4-202ENST00000441080 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
PFDN4-202ENST00000441080 SPSB2Q99619 263 aa10.06□□□□□ -0.8
PFDN4-202ENST00000441080 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
PFDN4-202ENST00000441080 ZNF516Q92618 1163 aa10.05□□□□□ -0.8
PFDN4-202ENST00000441080 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
PFDN4-202ENST00000441080 ADH1BP00325 375 aa10.03□□□□□ -0.8
PFDN4-202ENST00000441080 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
PFDN4-202ENST00000441080 MSS51Q4VC12 460 aa10.02□□□□□ -0.81
PFDN4-202ENST00000441080 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
PFDN4-202ENST00000441080 JUNDP17535 347 aa10.01□□□□□ -0.81
PFDN4-202ENST00000441080 UBTFP17480 764 aaKnown RBP10□□□□□ -0.81
PFDN4-202ENST00000441080 FAM160A2Q8N612 972 aaPredicted RBP10□□□□□ -0.81
PFDN4-202ENST00000441080 MTMR14Q8NCE2 650 aa10□□□□□ -0.81
PFDN4-202ENST00000441080 PRDM9Q9NQV7 894 aa10□□□□□ -0.81
PFDN4-202ENST00000441080 KCNC4Q03721 635 aa9.99□□□□□ -0.81
PFDN4-202ENST00000441080 APBB1O00213 710 aa9.98□□□□□ -0.81
PFDN4-202ENST00000441080 SOCS7O14512 581 aa9.98□□□□□ -0.81
PFDN4-202ENST00000441080 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
PFDN4-202ENST00000441080 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
PFDN4-202ENST00000441080 LYPD8Q6UX82 237 aa9.98□□□□□ -0.81
PFDN4-202ENST00000441080 NKX2-3Q8TAU0 364 aa9.98□□□□□ -0.81
PFDN4-202ENST00000441080 LRRN4Q8WUT4 740 aa9.98□□□□□ -0.81
PFDN4-202ENST00000441080 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
PFDN4-202ENST00000441080 SLC6A16Q9GZN6 736 aa9.97□□□□□ -0.81
PFDN4-202ENST00000441080 HMX1Q9NP08 348 aaPredicted RBP9.97□□□□□ -0.81
PFDN4-202ENST00000441080 MMP16P51512 607 aa9.96□□□□□ -0.82
PFDN4-202ENST00000441080 RAD21O60216 631 aa9.95□□□□□ -0.82
PFDN4-202ENST00000441080 PTPRNQ16849 979 aa9.95□□□□□ -0.82
PFDN4-202ENST00000441080 S1PR4O95977 384 aa9.94□□□□□ -0.82
PFDN4-202ENST00000441080 ZMYND15Q9H091 742 aa9.94□□□□□ -0.82
PFDN4-202ENST00000441080 PRM3Q9NNZ6 103 aa9.94□□□□□ -0.82
PFDN4-202ENST00000441080 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
PFDN4-202ENST00000441080 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
PFDN4-202ENST00000441080 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
PFDN4-202ENST00000441080 CCNYL3P0C7X3 344 aa9.92□□□□□ -0.82
PFDN4-202ENST00000441080 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
PFDN4-202ENST00000441080 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
PFDN4-202ENST00000441080 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
PFDN4-202ENST00000441080 NR6A1Q15406 480 aa9.91□□□□□ -0.82
PFDN4-202ENST00000441080 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
PFDN4-202ENST00000441080 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
PFDN4-202ENST00000441080 CTHP32929 405 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 CCDC24Q8N4L8 307 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 EPS8L1Q8TE68 723 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 MAP10Q9P2G4 905 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
PFDN4-202ENST00000441080 A6NJR5 290 aa9.89□□□□□ -0.83
PFDN4-202ENST00000441080 GGCXP38435 758 aa9.88□□□□□ -0.83
PFDN4-202ENST00000441080 EVA1BQ9NVM1 165 aa9.88□□□□□ -0.83
PFDN4-202ENST00000441080 FCF1Q9Y324 198 aaKnown RBP9.88□□□□□ -0.83
PFDN4-202ENST00000441080 ABL2P42684 1182 aa9.87□□□□□ -0.83
PFDN4-202ENST00000441080 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
PFDN4-202ENST00000441080 PROSER2Q86WR7 435 aaPredicted RBP9.87□□□□□ -0.83
PFDN4-202ENST00000441080 PNMA1Q8ND90 353 aa9.87□□□□□ -0.83
PFDN4-202ENST00000441080 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
PFDN4-202ENST00000441080 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
PFDN4-202ENST00000441080 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
PFDN4-202ENST00000441080 PPP1R18Q6NYC8 613 aa9.84□□□□□ -0.83
PFDN4-202ENST00000441080 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
PFDN4-202ENST00000441080 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
PFDN4-202ENST00000441080 FKBPLQ9UIM3 349 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms